RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.68
BRCA1-206ENST00000461574 MYO15BQ96JP2 1530 aa10.73□□□□□ -0.69
BRCA1-206ENST00000461574 CC2D2AQ9P2K1 1620 aa10.65□□□□□ -0.7
BRCA1-206ENST00000461574 TSPYL2Q9H2G4 693 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-206ENST00000461574 CECR2Q9BXF3 1484 aa10.63□□□□□ -0.71
BRCA1-206ENST00000461574 SHROOM4Q9ULL8 1493 aa10.63□□□□□ -0.71
BRCA1-206ENST00000461574 MIER1Q8N108 512 aa10.62□□□□□ -0.71
BRCA1-206ENST00000461574 MS4A3Q96HJ5 214 aa10.62□□□□□ -0.71
BRCA1-206ENST00000461574 PELP1Q8IZL8 1130 aaKnown RBP10.6□□□□□ -0.71
BRCA1-206ENST00000461574 CCDC61Q9Y6R9 512 aa10.59□□□□□ -0.71
BRCA1-206ENST00000461574 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
BRCA1-206ENST00000461574 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
BRCA1-206ENST00000461574 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
BRCA1-206ENST00000461574 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
BRCA1-206ENST00000461574 FKBP8Q14318 412 aa10.54□□□□□ -0.72
BRCA1-206ENST00000461574 RASEFQ8IZ41 740 aa10.54□□□□□ -0.72
BRCA1-206ENST00000461574 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-206ENST00000461574 ZCCHC6Q5VYS8 1495 aaKnown RBP10.53□□□□□ -0.72
BRCA1-206ENST00000461574 ATMINO43313 823 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-206ENST00000461574 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
BRCA1-206ENST00000461574 KIF12Q96FN5 646 aa10.52□□□□□ -0.73
BRCA1-206ENST00000461574 OTUD5Q96G74 571 aa10.51□□□□□ -0.73
BRCA1-206ENST00000461574 DCAF1Q9Y4B6 1507 aa10.51□□□□□ -0.73
BRCA1-206ENST00000461574 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
BRCA1-206ENST00000461574 MAP3K13O43283 966 aa10.47□□□□□ -0.73
BRCA1-206ENST00000461574 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-206ENST00000461574 TRPC6Q9Y210 931 aa10.46□□□□□ -0.73
BRCA1-206ENST00000461574 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
BRCA1-206ENST00000461574 C7P10643 843 aa10.44□□□□□ -0.74
BRCA1-206ENST00000461574 NUBP1P53384 320 aa10.42□□□□□ -0.74
BRCA1-206ENST00000461574 BMP2KQ9NSY1 1161 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-206ENST00000461574 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
BRCA1-206ENST00000461574 DNAJC5Q9H3Z4 198 aa10.41□□□□□ -0.74
BRCA1-206ENST00000461574 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-206ENST00000461574 TIE1P35590 1138 aa10.37□□□□□ -0.75
BRCA1-206ENST00000461574 POTEFA5A3E0 1075 aa10.35□□□□□ -0.75
BRCA1-206ENST00000461574 PCDHB13Q9Y5F0 798 aa10.35□□□□□ -0.75
BRCA1-206ENST00000461574 TTLL13PA6NNM8 815 aa10.34□□□□□ -0.75
BRCA1-206ENST00000461574 FAM212AQ96EL1 285 aa10.32□□□□□ -0.76
BRCA1-206ENST00000461574 SGIP1Q9BQI5 828 aa10.32□□□□□ -0.76
BRCA1-206ENST00000461574 IFNL1Q8IU54 200 aa10.3□□□□□ -0.76
BRCA1-206ENST00000461574 MAMSTRQ6ZN01 415 aa10.29□□□□□ -0.76
BRCA1-206ENST00000461574 FBXO3Q9UK99 471 aa10.29□□□□□ -0.76
BRCA1-206ENST00000461574 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-206ENST00000461574 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
BRCA1-206ENST00000461574 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
BRCA1-206ENST00000461574 SCUBE2Q9NQ36 999 aa10.25□□□□□ -0.77
BRCA1-206ENST00000461574 CUX2O14529 1486 aa10.24□□□□□ -0.77
BRCA1-206ENST00000461574 SEC24BO95487 1268 aa10.24□□□□□ -0.77
BRCA1-206ENST00000461574 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
BRCA1-206ENST00000461574 POTEMA6NI47 508 aa10.23□□□□□ -0.77
BRCA1-206ENST00000461574 PYGBP11216 843 aa10.22□□□□□ -0.77
BRCA1-206ENST00000461574 TMEM106CQ9BVX2 250 aa10.22□□□□□ -0.77
BRCA1-206ENST00000461574 IER5LQ5T953 404 aa10.21□□□□□ -0.77
BRCA1-206ENST00000461574 POTEGQ6S5H5 508 aa10.21□□□□□ -0.77
BRCA1-206ENST00000461574 VASPP50552 380 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-206ENST00000461574 PLSCR2Q9NRY7 297 aa10.2□□□□□ -0.78
BRCA1-206ENST00000461574 KLHL34Q8N239 644 aa10.18□□□□□ -0.78
BRCA1-206ENST00000461574 LCE2DQ5TA82 110 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-206ENST00000461574 PCDHB8Q9UN66 801 aa10.16□□□□□ -0.78
BRCA1-206ENST00000461574 FAM163AQ96GL9 167 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-206ENST00000461574 PLCG2P16885 1265 aa10.11□□□□□ -0.79
BRCA1-206ENST00000461574 IRX5P78411 483 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-206ENST00000461574 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
BRCA1-206ENST00000461574 GSE1Q14687 1217 aa10.09□□□□□ -0.79
BRCA1-206ENST00000461574 SMARCA2P51531 1590 aa10.07□□□□□ -0.8
BRCA1-206ENST00000461574 HMGXB3Q12766 1538 aa10.06□□□□□ -0.8
BRCA1-206ENST00000461574 SLAIN1Q8ND83 568 aa10.05□□□□□ -0.8
BRCA1-206ENST00000461574 OCEL1Q9H607 264 aa10.05□□□□□ -0.8
BRCA1-206ENST00000461574 ATAD2BQ9ULI0 1458 aa10.04□□□□□ -0.8
BRCA1-206ENST00000461574 NESP48681 1621 aa10.04□□□□□ -0.8
BRCA1-206ENST00000461574 SMARCA4P51532 1647 aa10.04□□□□□ -0.8
BRCA1-206ENST00000461574 CHRM1P11229 460 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-206ENST00000461574 ZNF467Q7Z7K2 595 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-206ENST00000461574 IFNLR1Q8IU57 520 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-206ENST00000461574 THOC2Q8NI27 1593 aaKnown RBP10.02□□□□□ -0.81
BRCA1-206ENST00000461574 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
BRCA1-206ENST00000461574 BAZ1BQ9UIG0 1483 aaKnown RBP10□□□□□ -0.81
BRCA1-206ENST00000461574 SPOCK2Q92563 424 aa9.99□□□□□ -0.81
BRCA1-206ENST00000461574 LAMC3Q9Y6N6 1575 aa9.98□□□□□ -0.81
BRCA1-206ENST00000461574 KIF21AQ7Z4S6 1674 aa9.98□□□□□ -0.81
BRCA1-206ENST00000461574 PSEN1P49768 467 aa9.97□□□□□ -0.81
BRCA1-206ENST00000461574 PDCD7Q8N8D1 485 aaKnown RBP9.96□□□□□ -0.82
BRCA1-206ENST00000461574 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
BRCA1-206ENST00000461574 CIZ1Q9ULV3 898 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-206ENST00000461574 BAZ1AQ9NRL2 1556 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-206ENST00000461574 ST18O60284 1047 aa9.95□□□□□ -0.82
BRCA1-206ENST00000461574 GOLGA2Q08379 1002 aa9.95□□□□□ -0.82
BRCA1-206ENST00000461574 MKRN3Q13064 507 aaKnown RBP9.94□□□□□ -0.82
BRCA1-206ENST00000461574 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.93□□□□□ -0.82
BRCA1-206ENST00000461574 PDAP1Q13442 181 aaKnown RBP9.91□□□□□ -0.82
BRCA1-206ENST00000461574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.91□□□□□ -0.82
BRCA1-206ENST00000461574 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.82
BRCA1-206ENST00000461574 PEG3Q9GZU2 1588 aa9.9□□□□□ -0.82
BRCA1-206ENST00000461574 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
BRCA1-206ENST00000461574 L3MBTL3Q96JM7 780 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-206ENST00000461574 CABP2Q9NPB3 220 aa9.86□□□□□ -0.83
BRCA1-206ENST00000461574 C3orf67Q6ZVT6 689 aa9.85□□□□□ -0.83
BRCA1-206ENST00000461574 ILDR1Q86SU0 546 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-206ENST00000461574 DPY19L2Q6NUT2 758 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms