RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 FAM69CQ0P6D2 419 aa31.05■■■□□ 2.56
TOP3A-202ENST00000461127 ABCC10Q5T3U5 1492 aa31.01■■■□□ 2.56
TOP3A-202ENST00000461127 SUPT5HO00267 1087 aaKnown RBP30.97■■■□□ 2.55
TOP3A-202ENST00000461127 MAPKBP1O60336 1514 aa30.94■■■□□ 2.54
TOP3A-202ENST00000461127 RUSC2Q8N2Y8 1516 aa30.9■■■□□ 2.54
TOP3A-202ENST00000461127 DIP2BQ9P265 1576 aa30.88■■■□□ 2.53
TOP3A-202ENST00000461127 KDM6BO15054 1643 aa30.84■■■□□ 2.53
TOP3A-202ENST00000461127 ADCY10Q96PN6 1610 aa30.82■■■□□ 2.52
TOP3A-202ENST00000461127 KDM4FA0A1W2PPD8 638 aa30.78■■■□□ 2.52
TOP3A-202ENST00000461127 TSPOAP1O95153 1857 aa30.73■■■□□ 2.51
TOP3A-202ENST00000461127 KIAA0586Q9BVV6 1533 aa30.72■■■□□ 2.51
TOP3A-202ENST00000461127 PTPRGP23470 1445 aa30.58■■■□□ 2.49
TOP3A-202ENST00000461127 IGF1RP08069 1367 aa30.56■■■□□ 2.48
TOP3A-202ENST00000461127 CUL7Q14999 1698 aa30.56■■■□□ 2.48
TOP3A-202ENST00000461127 ILDR1Q86SU0 546 aaPredicted RBP30.55■■■□□ 2.48
TOP3A-202ENST00000461127 KIF27Q86VH2 1401 aa30.54■■■□□ 2.48
TOP3A-202ENST00000461127 TTBK1Q5TCY1 1321 aaPredicted RBP30.51■■■□□ 2.48
TOP3A-202ENST00000461127 CARMIL2Q6F5E8 1435 aa30.49■■■□□ 2.47
TOP3A-202ENST00000461127 ABCC2Q92887 1545 aa30.49■■■□□ 2.47
TOP3A-202ENST00000461127 PLB1Q6P1J6 1458 aa30.47■■■□□ 2.47
TOP3A-202ENST00000461127 TNIKQ9UKE5 1360 aa30.46■■■□□ 2.47
TOP3A-202ENST00000461127 ASXL2Q76L83 1435 aa30.45■■■□□ 2.46
TOP3A-202ENST00000461127 GLI2P10070 1586 aa30.43■■■□□ 2.46
TOP3A-202ENST00000461127 ADGRL1O94910 1474 aa30.4■■■□□ 2.46
TOP3A-202ENST00000461127 PPRC1Q5VV67 1664 aaKnown RBP30.38■■■□□ 2.45
TOP3A-202ENST00000461127 CARMIL1Q5VZK9 1371 aa30.38■■■□□ 2.45
TOP3A-202ENST00000461127 UHRF1BP1LA0JNW5 1464 aa30.35■■■□□ 2.45
TOP3A-202ENST00000461127 IQGAP2Q13576 1575 aa30.32■■■□□ 2.45
TOP3A-202ENST00000461127 UACAQ9BZF9 1416 aa30.3■■■□□ 2.44
TOP3A-202ENST00000461127 TEX14Q8IWB6 1497 aa30.27■■■□□ 2.44
TOP3A-202ENST00000461127 EPRSP07814 1512 aaKnown RBP30.25■■■□□ 2.43
TOP3A-202ENST00000461127 COL17A1Q9UMD9 1497 aaPredicted RBP30.23■■■□□ 2.43
TOP3A-202ENST00000461127 MAP3K4Q9Y6R4 1608 aa30.22■■■□□ 2.43
TOP3A-202ENST00000461127 KDM5BQ9UGL1 1544 aa30.21■■■□□ 2.43
TOP3A-202ENST00000461127 HECW2Q9P2P5 1572 aa30.19■■■□□ 2.42
TOP3A-202ENST00000461127 DISP1Q96F81 1524 aa30.18■■■□□ 2.42
TOP3A-202ENST00000461127 ZCCHC11Q5TAX3 1644 aaKnown RBP30.13■■■□□ 2.41
TOP3A-202ENST00000461127 UGGT2Q9NYU1 1516 aa30.09■■■□□ 2.41
TOP3A-202ENST00000461127 WDR7Q9Y4E6 1490 aa30.05■■■□□ 2.4
TOP3A-202ENST00000461127 KIAA0556O60303 1618 aa30.04■■■□□ 2.4
TOP3A-202ENST00000461127 RAPGEF2Q9Y4G8 1499 aa30.02■■■□□ 2.4
TOP3A-202ENST00000461127 CD109Q6YHK3 1445 aa29.96■■■□□ 2.39
TOP3A-202ENST00000461127 MAGI3Q5TCQ9 1506 aa29.94■■■□□ 2.38
TOP3A-202ENST00000461127 CFAP43Q8NDM7 1665 aa29.92■■■□□ 2.38
TOP3A-202ENST00000461127 KCNH8Q96L42 1107 aa29.9■■■□□ 2.38
TOP3A-202ENST00000461127 GOLGA3Q08378 1498 aa29.85■■■□□ 2.37
TOP3A-202ENST00000461127 FBXO41Q8TF61 875 aa29.8■■■□□ 2.36
TOP3A-202ENST00000461127 CTTNBP2Q8WZ74 1663 aa29.79■■■□□ 2.36
TOP3A-202ENST00000461127 KIF21BO75037 1637 aa29.79■■■□□ 2.36
TOP3A-202ENST00000461127 ABCA8O94911 1581 aa29.79■■■□□ 2.36
TOP3A-202ENST00000461127 FAM9AQ8IZU1 332 aaPredicted RBP29.74■■■□□ 2.35
TOP3A-202ENST00000461127 ARAP3Q8WWN8 1544 aa29.73■■■□□ 2.35
TOP3A-202ENST00000461127 PHLDB1Q86UU1 1377 aa29.65■■■□□ 2.34
TOP3A-202ENST00000461127 PTPRMP28827 1452 aa29.63■■■□□ 2.33
TOP3A-202ENST00000461127 ADAMTSL3P82987 1691 aa29.6■■■□□ 2.33
TOP3A-202ENST00000461127 ARID3CA6NKF2 412 aa29.59■■■□□ 2.33
TOP3A-202ENST00000461127 ATP10BO94823 1461 aa29.55■■■□□ 2.32
TOP3A-202ENST00000461127 ABCA9Q8IUA7 1624 aa29.55■■■□□ 2.32
TOP3A-202ENST00000461127 RAPGEF3O95398 923 aa29.53■■■□□ 2.32
TOP3A-202ENST00000461127 ARID4BQ4LE39 1312 aaPredicted RBP29.51■■■□□ 2.32
TOP3A-202ENST00000461127 NEO1Q92859 1461 aa29.51■■■□□ 2.31
TOP3A-202ENST00000461127 PRXQ9BXM0 1461 aa29.5■■■□□ 2.31
TOP3A-202ENST00000461127 P3H3Q8IVL6 736 aa29.48■■■□□ 2.31
TOP3A-202ENST00000461127 BCORL1Q5H9F3 1711 aa29.48■■■□□ 2.31
TOP3A-202ENST00000461127 PCF11O94913 1555 aaKnown RBP29.47■■■□□ 2.31
TOP3A-202ENST00000461127 MADDQ8WXG6 1647 aa29.44■■■□□ 2.3
TOP3A-202ENST00000461127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.43■■■□□ 2.3
TOP3A-202ENST00000461127 HNRNPUL2Q1KMD3 747 aaKnown RBP29.43■■■□□ 2.3
TOP3A-202ENST00000461127 LMTK3Q96Q04 1460 aa29.41■■■□□ 2.3
TOP3A-202ENST00000461127 FRMPD1Q5SYB0 1578 aa29.38■■■□□ 2.29
TOP3A-202ENST00000461127 RAPGEF6Q8TEU7 1601 aa29.37■■■□□ 2.29
TOP3A-202ENST00000461127 RIMS1Q86UR5 1692 aaKnown RBP29.32■■■□□ 2.28
TOP3A-202ENST00000461127 ARHGEF40Q8TER5 1519 aa29.32■■■□□ 2.28
TOP3A-202ENST00000461127 SAMD9Q5K651 1589 aa29.3■■■□□ 2.28
TOP3A-202ENST00000461127 DENND4BO75064 1496 aaPredicted RBP29.29■■■□□ 2.28
TOP3A-202ENST00000461127 POGZQ7Z3K3 1410 aa29.28■■■□□ 2.28
TOP3A-202ENST00000461127 HSPA2P54652 639 aa29.25■■■□□ 2.27
TOP3A-202ENST00000461127 FANCAO15360 1455 aa29.23■■■□□ 2.27
TOP3A-202ENST00000461127 NUP153P49790 1475 aaKnown RBP29.23■■■□□ 2.27
TOP3A-202ENST00000461127 RICTORQ6R327 1708 aa29.23■■■□□ 2.27
TOP3A-202ENST00000461127 AKNAQ7Z591 1439 aa29.23■■■□□ 2.27
TOP3A-202ENST00000461127 PLEKHD1A6NEE1 506 aa29.23■■■□□ 2.27
TOP3A-202ENST00000461127 PLPPR3Q6T4P5 718 aa29.23■■■□□ 2.27
TOP3A-202ENST00000461127 CFAP74Q9C0B2 1584 aa29.22■■■□□ 2.27
TOP3A-202ENST00000461127 FHOD3Q2V2M9 1422 aa29.22■■■□□ 2.27
TOP3A-202ENST00000461127 CERKQ8TCT0 537 aa29.17■■■□□ 2.26
TOP3A-202ENST00000461127 EFCAB5A4FU69 1503 aa29.15■■■□□ 2.26
TOP3A-202ENST00000461127 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
TOP3A-202ENST00000461127 ZMYM4Q5VZL5 1548 aa29.15■■■□□ 2.26
TOP3A-202ENST00000461127 ZFYVE16Q7Z3T8 1539 aa29.15■■■□□ 2.26
TOP3A-202ENST00000461127 MAGI2Q86UL8 1455 aa29.12■■■□□ 2.25
TOP3A-202ENST00000461127 RANGAP1P46060 587 aaPredicted RBP29.12■■■□□ 2.25
TOP3A-202ENST00000461127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.1■■■□□ 2.25
TOP3A-202ENST00000461127 MLECQ14165 292 aa29.09■■■□□ 2.25
TOP3A-202ENST00000461127 YEATS2Q9ULM3 1422 aa29.09■■■□□ 2.25
TOP3A-202ENST00000461127 FER1L4A9Z1Z3 1794 aa29.06■■■□□ 2.24
TOP3A-202ENST00000461127 TTC37Q6PGP7 1564 aa29.05■■■□□ 2.24
TOP3A-202ENST00000461127 SIGLEC1Q9BZZ2 1709 aa29.03■■■□□ 2.24
TOP3A-202ENST00000461127 HECW1Q76N89 1606 aa29.02■■■□□ 2.24
TOP3A-202ENST00000461127 SCAPERQ9BY12 1400 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms