RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
SSX2IP-204ENST00000459708 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
SSX2IP-204ENST00000459708 ATMINO43313 823 aaPredicted RBP11.37□□□□□ -0.59
SSX2IP-204ENST00000459708 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
SSX2IP-204ENST00000459708 CCDC61Q9Y6R9 512 aa11.34□□□□□ -0.59
SSX2IP-204ENST00000459708 C7P10643 843 aa11.32□□□□□ -0.6
SSX2IP-204ENST00000459708 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
SSX2IP-204ENST00000459708 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
SSX2IP-204ENST00000459708 ATN1P54259 1190 aaPredicted RBP11.28□□□□□ -0.6
SSX2IP-204ENST00000459708 MIER1Q8N108 512 aa11.27□□□□□ -0.61
SSX2IP-204ENST00000459708 POTEMA6NI47 508 aa11.26□□□□□ -0.61
SSX2IP-204ENST00000459708 POTEJP0CG39 1038 aa11.26□□□□□ -0.61
SSX2IP-204ENST00000459708 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
SSX2IP-204ENST00000459708 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
SSX2IP-204ENST00000459708 TRPC6Q9Y210 931 aa11.24□□□□□ -0.61
SSX2IP-204ENST00000459708 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
SSX2IP-204ENST00000459708 MAP3K13O43283 966 aa11.22□□□□□ -0.61
SSX2IP-204ENST00000459708 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
SSX2IP-204ENST00000459708 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
SSX2IP-204ENST00000459708 PLCD3Q8N3E9 789 aa11.19□□□□□ -0.62
SSX2IP-204ENST00000459708 TIE1P35590 1138 aa11.17□□□□□ -0.62
SSX2IP-204ENST00000459708 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
SSX2IP-204ENST00000459708 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
SSX2IP-204ENST00000459708 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
SSX2IP-204ENST00000459708 TTLL13PA6NNM8 815 aa11.12□□□□□ -0.63
SSX2IP-204ENST00000459708 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
SSX2IP-204ENST00000459708 PCDHB13Q9Y5F0 798 aa11.09□□□□□ -0.63
SSX2IP-204ENST00000459708 SEC24BO95487 1268 aa11.08□□□□□ -0.64
SSX2IP-204ENST00000459708 NUBP1P53384 320 aa11.08□□□□□ -0.64
SSX2IP-204ENST00000459708 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
SSX2IP-204ENST00000459708 COLQQ9Y215 455 aaPredicted RBP11.08□□□□□ -0.64
SSX2IP-204ENST00000459708 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
SSX2IP-204ENST00000459708 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
SSX2IP-204ENST00000459708 SGIP1Q9BQI5 828 aa11.05□□□□□ -0.64
SSX2IP-204ENST00000459708 FAM212AQ96EL1 285 aa11.03□□□□□ -0.64
SSX2IP-204ENST00000459708 IFNL1Q8IU54 200 aa11.02□□□□□ -0.65
SSX2IP-204ENST00000459708 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.65
SSX2IP-204ENST00000459708 IER5LQ5T953 404 aa11.01□□□□□ -0.65
SSX2IP-204ENST00000459708 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
SSX2IP-204ENST00000459708 TMEM106CQ9BVX2 250 aa10.97□□□□□ -0.65
SSX2IP-204ENST00000459708 PLCG2P16885 1265 aa10.92□□□□□ -0.66
SSX2IP-204ENST00000459708 KLHL34Q8N239 644 aa10.9□□□□□ -0.66
SSX2IP-204ENST00000459708 SLAIN1Q8ND83 568 aa10.9□□□□□ -0.66
SSX2IP-204ENST00000459708 PYGBP11216 843 aa10.89□□□□□ -0.67
SSX2IP-204ENST00000459708 DCAF8Q5TAQ9 597 aa10.89□□□□□ -0.67
SSX2IP-204ENST00000459708 IRX5P78411 483 aaPredicted RBP10.86□□□□□ -0.67
SSX2IP-204ENST00000459708 PCDHB8Q9UN66 801 aa10.83□□□□□ -0.68
SSX2IP-204ENST00000459708 ST18O60284 1047 aa10.81□□□□□ -0.68
SSX2IP-204ENST00000459708 CDAN1Q8IWY9 1227 aa10.81□□□□□ -0.68
SSX2IP-204ENST00000459708 SPOCK2Q92563 424 aa10.81□□□□□ -0.68
SSX2IP-204ENST00000459708 OCEL1Q9H607 264 aa10.8□□□□□ -0.68
SSX2IP-204ENST00000459708 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.73□□□□□ -0.69
SSX2IP-204ENST00000459708 GSE1Q14687 1217 aa10.71□□□□□ -0.69
SSX2IP-204ENST00000459708 ZNF467Q7Z7K2 595 aaPredicted RBP10.71□□□□□ -0.69
SSX2IP-204ENST00000459708 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
SSX2IP-204ENST00000459708 PDCD7Q8N8D1 485 aaKnown RBP10.68□□□□□ -0.7
SSX2IP-204ENST00000459708 SNPHO15079 494 aa10.67□□□□□ -0.7
SSX2IP-204ENST00000459708 MKRN3Q13064 507 aaKnown RBP10.67□□□□□ -0.7
SSX2IP-204ENST00000459708 TMEM121BQ9BXQ6 578 aaPredicted RBP10.67□□□□□ -0.7
SSX2IP-204ENST00000459708 C3orf67Q6ZVT6 689 aa10.66□□□□□ -0.7
SSX2IP-204ENST00000459708 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
SSX2IP-204ENST00000459708 MARVELD3Q96A59 401 aa10.64□□□□□ -0.71
SSX2IP-204ENST00000459708 PSEN1P49768 467 aa10.63□□□□□ -0.71
SSX2IP-204ENST00000459708 CHRM1P11229 460 aaPredicted RBP10.61□□□□□ -0.71
SSX2IP-204ENST00000459708 PKD2Q13563 968 aa10.61□□□□□ -0.71
SSX2IP-204ENST00000459708 RTN4Q9NQC3 1192 aaKnown RBP10.61□□□□□ -0.71
SSX2IP-204ENST00000459708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.61□□□□□ -0.71
SSX2IP-204ENST00000459708 L3MBTL3Q96JM7 780 aaPredicted RBP10.6□□□□□ -0.71
SSX2IP-204ENST00000459708 PDAP1Q13442 181 aaKnown RBP10.56□□□□□ -0.72
SSX2IP-204ENST00000459708 AMER1Q5JTC6 1135 aaPredicted RBP10.56□□□□□ -0.72
SSX2IP-204ENST00000459708 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
SSX2IP-204ENST00000459708 SPNS2Q8IVW8 549 aa10.55□□□□□ -0.72
SSX2IP-204ENST00000459708 EMP3P54852 163 aa10.54□□□□□ -0.72
SSX2IP-204ENST00000459708 CABP2Q9NPB3 220 aa10.52□□□□□ -0.73
SSX2IP-204ENST00000459708 DPY19L2Q6NUT2 758 aa10.51□□□□□ -0.73
SSX2IP-204ENST00000459708 ECM2O94769 699 aaPredicted RBP10.5□□□□□ -0.73
SSX2IP-204ENST00000459708 ILDR1Q86SU0 546 aaPredicted RBP10.5□□□□□ -0.73
SSX2IP-204ENST00000459708 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
SSX2IP-204ENST00000459708 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
SSX2IP-204ENST00000459708 G3V3G9 751 aa10.47□□□□□ -0.73
SSX2IP-204ENST00000459708 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
SSX2IP-204ENST00000459708 FAM205CA6NFA0 338 aa10.46□□□□□ -0.73
SSX2IP-204ENST00000459708 RGL2O15211 777 aa10.45□□□□□ -0.74
SSX2IP-204ENST00000459708 BOLA1Q9Y3E2 137 aa10.45□□□□□ -0.74
SSX2IP-204ENST00000459708 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
SSX2IP-204ENST00000459708 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
SSX2IP-204ENST00000459708 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
SSX2IP-204ENST00000459708 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
SSX2IP-204ENST00000459708 RIOK3O14730 519 aaKnown RBP10.39□□□□□ -0.75
SSX2IP-204ENST00000459708 HOXB3P14651 431 aaPredicted RBP10.39□□□□□ -0.75
SSX2IP-204ENST00000459708 ZNF710Q8N1W2 664 aa10.36□□□□□ -0.75
SSX2IP-204ENST00000459708 EFCAB3Q8N7B9 438 aa10.36□□□□□ -0.75
SSX2IP-204ENST00000459708 DOK7Q18PE1 504 aa10.33□□□□□ -0.76
SSX2IP-204ENST00000459708 HOXB1P14653 301 aaPredicted RBP10.32□□□□□ -0.76
SSX2IP-204ENST00000459708 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
SSX2IP-204ENST00000459708 DCAF8L2P0C7V8 631 aa10.31□□□□□ -0.76
SSX2IP-204ENST00000459708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.3□□□□□ -0.76
SSX2IP-204ENST00000459708 ZFP91Q96JP5 570 aaPredicted RBP10.3□□□□□ -0.76
SSX2IP-204ENST00000459708 ERBB3P21860 1342 aa10.29□□□□□ -0.76
SSX2IP-204ENST00000459708 RIMBP2O15034 1052 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms