RNA–Protein interactions for RNA: ENST00000459652.1

SEMA3C-206, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-206ENST00000459652 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
SEMA3C-206ENST00000459652 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
SEMA3C-206ENST00000459652 POTEJP0CG39 1038 aa11.15□□□□□ -0.62
SEMA3C-206ENST00000459652 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
SEMA3C-206ENST00000459652 SPNS2Q8IVW8 549 aa11.11□□□□□ -0.63
SEMA3C-206ENST00000459652 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
SEMA3C-206ENST00000459652 ASTLQ6HA08 431 aaPredicted RBP11.09□□□□□ -0.63
SEMA3C-206ENST00000459652 FKBP8Q14318 412 aa11.08□□□□□ -0.64
SEMA3C-206ENST00000459652 PLCB2Q00722 1185 aa11.05□□□□□ -0.64
SEMA3C-206ENST00000459652 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
SEMA3C-206ENST00000459652 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
SEMA3C-206ENST00000459652 BCANQ96GW7 911 aa11.03□□□□□ -0.64
SEMA3C-206ENST00000459652 ATMINO43313 823 aaPredicted RBP10.98□□□□□ -0.65
SEMA3C-206ENST00000459652 TAOK2Q9UL54 1235 aa10.98□□□□□ -0.65
SEMA3C-206ENST00000459652 DAXXQ9UER7 740 aaPredicted RBP10.94□□□□□ -0.66
SEMA3C-206ENST00000459652 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
SEMA3C-206ENST00000459652 ST18O60284 1047 aa10.86□□□□□ -0.67
SEMA3C-206ENST00000459652 TMEM121BQ9BXQ6 578 aaPredicted RBP10.84□□□□□ -0.67
SEMA3C-206ENST00000459652 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
SEMA3C-206ENST00000459652 MS4A3Q96HJ5 214 aa10.79□□□□□ -0.68
SEMA3C-206ENST00000459652 VSIG10Q8N0Z9 540 aa10.78□□□□□ -0.68
SEMA3C-206ENST00000459652 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
SEMA3C-206ENST00000459652 ARXQ96QS3 562 aa10.75□□□□□ -0.69
SEMA3C-206ENST00000459652 NPM1P06748 294 aaKnown RBP eCLIP10.74□□□□□ -0.69
SEMA3C-206ENST00000459652 TPRNQ4KMQ1 711 aa10.74□□□□□ -0.69
SEMA3C-206ENST00000459652 ATN1P54259 1190 aaPredicted RBP10.73□□□□□ -0.69
SEMA3C-206ENST00000459652 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
SEMA3C-206ENST00000459652 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
SEMA3C-206ENST00000459652 SLAIN1Q8ND83 568 aa10.67□□□□□ -0.7
SEMA3C-206ENST00000459652 SEC24BO95487 1268 aa10.65□□□□□ -0.7
SEMA3C-206ENST00000459652 SNPHO15079 494 aa10.64□□□□□ -0.71
SEMA3C-206ENST00000459652 TIMELESSQ9UNS1 1208 aa10.64□□□□□ -0.71
SEMA3C-206ENST00000459652 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
SEMA3C-206ENST00000459652 TIE1P35590 1138 aa10.55□□□□□ -0.72
SEMA3C-206ENST00000459652 IER5LQ5T953 404 aa10.55□□□□□ -0.72
SEMA3C-206ENST00000459652 TULP1O00294 542 aaPredicted RBP10.54□□□□□ -0.72
SEMA3C-206ENST00000459652 ERICH6Q7L0X2 663 aa10.54□□□□□ -0.72
SEMA3C-206ENST00000459652 BMP2KQ9NSY1 1161 aaPredicted RBP10.54□□□□□ -0.72
SEMA3C-206ENST00000459652 COLQQ9Y215 455 aaPredicted RBP10.51□□□□□ -0.73
SEMA3C-206ENST00000459652 KDM2AQ9Y2K7 1162 aa10.51□□□□□ -0.73
SEMA3C-206ENST00000459652 MARVELD3Q96A59 401 aa10.46□□□□□ -0.73
SEMA3C-206ENST00000459652 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.73
SEMA3C-206ENST00000459652 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.73
SEMA3C-206ENST00000459652 GTF3C3Q9Y5Q9 886 aa10.45□□□□□ -0.74
SEMA3C-206ENST00000459652 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
SEMA3C-206ENST00000459652 EMP3P54852 163 aa10.41□□□□□ -0.74
SEMA3C-206ENST00000459652 DCAF8L2P0C7V8 631 aa10.4□□□□□ -0.74
SEMA3C-206ENST00000459652 MNX1P50219 401 aaPredicted RBP10.4□□□□□ -0.74
SEMA3C-206ENST00000459652 HOMEZQ8IX15 550 aa10.4□□□□□ -0.74
SEMA3C-206ENST00000459652 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
SEMA3C-206ENST00000459652 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
SEMA3C-206ENST00000459652 CCDC61Q9Y6R9 512 aa10.36□□□□□ -0.75
SEMA3C-206ENST00000459652 TTLL13PA6NNM8 815 aa10.35□□□□□ -0.75
SEMA3C-206ENST00000459652 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
SEMA3C-206ENST00000459652 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
SEMA3C-206ENST00000459652 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
SEMA3C-206ENST00000459652 PKD2Q13563 968 aa10.3□□□□□ -0.76
SEMA3C-206ENST00000459652 PLCG2P16885 1265 aa10.29□□□□□ -0.76
SEMA3C-206ENST00000459652 TRIM35Q9UPQ4 493 aa10.29□□□□□ -0.76
SEMA3C-206ENST00000459652 TSPYL2Q9H2G4 693 aaPredicted RBP10.28□□□□□ -0.76
SEMA3C-206ENST00000459652 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
SEMA3C-206ENST00000459652 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
SEMA3C-206ENST00000459652 VASPP50552 380 aaPredicted RBP10.26□□□□□ -0.77
SEMA3C-206ENST00000459652 FAM205CA6NFA0 338 aa10.25□□□□□ -0.77
SEMA3C-206ENST00000459652 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
SEMA3C-206ENST00000459652 PAXIP1Q6ZW49 1069 aaPredicted RBP10.24□□□□□ -0.77
SEMA3C-206ENST00000459652 PROM2Q8N271 834 aa10.23□□□□□ -0.77
SEMA3C-206ENST00000459652 MAP3K13O43283 966 aa10.21□□□□□ -0.77
SEMA3C-206ENST00000459652 IFNLR1Q8IU57 520 aaPredicted RBP10.21□□□□□ -0.77
SEMA3C-206ENST00000459652 MYT1LQ9UL68 1186 aa10.21□□□□□ -0.77
SEMA3C-206ENST00000459652 POTEB3A0JP26 581 aa10.19□□□□□ -0.78
SEMA3C-206ENST00000459652 POTEBQ6S5H4 581 aa10.19□□□□□ -0.78
SEMA3C-206ENST00000459652 SGIP1Q9BQI5 828 aa10.19□□□□□ -0.78
SEMA3C-206ENST00000459652 PTGER2P43116 358 aa10.18□□□□□ -0.78
SEMA3C-206ENST00000459652 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
SEMA3C-206ENST00000459652 DNAJC5Q9H3Z4 198 aa10.15□□□□□ -0.78
SEMA3C-206ENST00000459652 NBR1Q14596 966 aa10.14□□□□□ -0.79
SEMA3C-206ENST00000459652 TSHZ2Q9NRE2 1034 aa10.13□□□□□ -0.79
SEMA3C-206ENST00000459652 IRX5P78411 483 aaPredicted RBP10.11□□□□□ -0.79
SEMA3C-206ENST00000459652 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
SEMA3C-206ENST00000459652 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
SEMA3C-206ENST00000459652 PLEKHG5O94827 1062 aa10.09□□□□□ -0.79
SEMA3C-206ENST00000459652 MIER1Q8N108 512 aa10.09□□□□□ -0.79
SEMA3C-206ENST00000459652 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
SEMA3C-206ENST00000459652 RANGAP1P46060 587 aaPredicted RBP10.05□□□□□ -0.8
SEMA3C-206ENST00000459652 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
SEMA3C-206ENST00000459652 C3orf67Q6ZVT6 689 aa10.02□□□□□ -0.81
SEMA3C-206ENST00000459652 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
SEMA3C-206ENST00000459652 ECM2O94769 699 aaPredicted RBP9.99□□□□□ -0.81
SEMA3C-206ENST00000459652 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
SEMA3C-206ENST00000459652 TMEM106CQ9BVX2 250 aa9.97□□□□□ -0.81
SEMA3C-206ENST00000459652 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
SEMA3C-206ENST00000459652 PODXL2Q9NZ53 605 aa9.96□□□□□ -0.82
SEMA3C-206ENST00000459652 ERBB3P21860 1342 aa9.93□□□□□ -0.82
SEMA3C-206ENST00000459652 L3MBTL3Q96JM7 780 aaPredicted RBP9.91□□□□□ -0.82
SEMA3C-206ENST00000459652 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
SEMA3C-206ENST00000459652 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
SEMA3C-206ENST00000459652 NUBP1P53384 320 aa9.89□□□□□ -0.83
SEMA3C-206ENST00000459652 SPOCK2Q92563 424 aa9.89□□□□□ -0.83
SEMA3C-206ENST00000459652 RGL2O15211 777 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms