RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	MS4A3	Q96HJ5	214 aa		11.93	□□□□□ -0.5
COL21A1-204	ENST00000456983	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.93	□□□□□ -0.5
COL21A1-204	ENST00000456983	PROM2	Q8N271	834 aa		11.92	□□□□□ -0.5
COL21A1-204	ENST00000456983	ATMIN	O43313	823 aa	Predicted RBP	11.9	□□□□□ -0.5
COL21A1-204	ENST00000456983	MIER1	Q8N108	512 aa		11.88	□□□□□ -0.51
COL21A1-204	ENST00000456983	SCUBE2	Q9NQ36	999 aa		11.87	□□□□□ -0.51
COL21A1-204	ENST00000456983	PCDH10	Q9P2E7	1040 aa		11.87	□□□□□ -0.51
COL21A1-204	ENST00000456983	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.87	□□□□□ -0.51
COL21A1-204	ENST00000456983	POTEB2	H3BUK9	544 aa		11.85	□□□□□ -0.51
COL21A1-204	ENST00000456983	PELP1	Q8IZL8	1130 aa	Known RBP	11.85	□□□□□ -0.51
COL21A1-204	ENST00000456983	CCDC61	Q9Y6R9	512 aa		11.85	□□□□□ -0.51
COL21A1-204	ENST00000456983	POTEM	A6NI47	508 aa		11.84	□□□□□ -0.51
COL21A1-204	ENST00000456983	KIF12	Q96FN5	646 aa		11.81	□□□□□ -0.52
COL21A1-204	ENST00000456983	TIE1	P35590	1138 aa		11.79	□□□□□ -0.52
COL21A1-204	ENST00000456983	POTEG	Q6S5H5	508 aa		11.79	□□□□□ -0.52
COL21A1-204	ENST00000456983	PLCD3	Q8N3E9	789 aa		11.79	□□□□□ -0.52
COL21A1-204	ENST00000456983	ATN1	P54259	1190 aa	Predicted RBP	11.76	□□□□□ -0.53
COL21A1-204	ENST00000456983	SGIP1	Q9BQI5	828 aa		11.75	□□□□□ -0.53
COL21A1-204	ENST00000456983	SEC24B	O95487	1268 aa		11.74	□□□□□ -0.53
COL21A1-204	ENST00000456983	MAP3K13	O43283	966 aa		11.71	□□□□□ -0.53
COL21A1-204	ENST00000456983	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.7	□□□□□ -0.54
COL21A1-204	ENST00000456983	IER5L	Q5T953	404 aa		11.67	□□□□□ -0.54
COL21A1-204	ENST00000456983	RASEF	Q8IZ41	740 aa		11.67	□□□□□ -0.54
COL21A1-204	ENST00000456983	FAM212A	Q96EL1	285 aa		11.65	□□□□□ -0.54
COL21A1-204	ENST00000456983	FAM163A	Q96GL9	167 aa	Predicted RBP	11.65	□□□□□ -0.54
COL21A1-204	ENST00000456983	PCDHB13	Q9Y5F0	798 aa		11.65	□□□□□ -0.54
COL21A1-204	ENST00000456983	TTLL13P	A6NNM8	815 aa		11.63	□□□□□ -0.55
COL21A1-204	ENST00000456983	POTEJ	P0CG39	1038 aa		11.61	□□□□□ -0.55
COL21A1-204	ENST00000456983	TRIM35	Q9UPQ4	493 aa		11.58	□□□□□ -0.56
COL21A1-204	ENST00000456983	TRPC6	Q9Y210	931 aa		11.56	□□□□□ -0.56
COL21A1-204	ENST00000456983	PLCG2	P16885	1265 aa		11.53	□□□□□ -0.56
COL21A1-204	ENST00000456983	POTEF	A5A3E0	1075 aa		11.52	□□□□□ -0.57
COL21A1-204	ENST00000456983	NUBP1	P53384	320 aa		11.52	□□□□□ -0.57
COL21A1-204	ENST00000456983	FBXO3	Q9UK99	471 aa		11.51	□□□□□ -0.57
COL21A1-204	ENST00000456983	TMEM106C	Q9BVX2	250 aa		11.5	□□□□□ -0.57
COL21A1-204	ENST00000456983	COLQ	Q9Y215	455 aa	Predicted RBP	11.49	□□□□□ -0.57
COL21A1-204	ENST00000456983	IFNL1	Q8IU54	200 aa		11.47	□□□□□ -0.57
COL21A1-204	ENST00000456983	SLAIN1	Q8ND83	568 aa		11.47	□□□□□ -0.57
COL21A1-204	ENST00000456983	DCAF8	Q5TAQ9	597 aa		11.46	□□□□□ -0.57
COL21A1-204	ENST00000456983	SNPH	O15079	494 aa		11.44	□□□□□ -0.58
COL21A1-204	ENST00000456983	FKBP8	Q14318	412 aa		11.44	□□□□□ -0.58
COL21A1-204	ENST00000456983	LCE2D	Q5TA82	110 aa	Predicted RBP	11.43	□□□□□ -0.58
COL21A1-204	ENST00000456983	OCEL1	Q9H607	264 aa		11.4	□□□□□ -0.58
COL21A1-204	ENST00000456983	CDAN1	Q8IWY9	1227 aa		11.39	□□□□□ -0.59
COL21A1-204	ENST00000456983	GOLGA2	Q08379	1002 aa		11.37	□□□□□ -0.59
COL21A1-204	ENST00000456983	GSE1	Q14687	1217 aa		11.37	□□□□□ -0.59
COL21A1-204	ENST00000456983	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.37	□□□□□ -0.59
COL21A1-204	ENST00000456983	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.37	□□□□□ -0.59
COL21A1-204	ENST00000456983	IRX5	P78411	483 aa	Predicted RBP	11.36	□□□□□ -0.59
COL21A1-204	ENST00000456983	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.34	□□□□□ -0.59
COL21A1-204	ENST00000456983	PYGB	P11216	843 aa		11.33	□□□□□ -0.6
COL21A1-204	ENST00000456983	ST18	O60284	1047 aa		11.32	□□□□□ -0.6
COL21A1-204	ENST00000456983	KLHL34	Q8N239	644 aa		11.32	□□□□□ -0.6
COL21A1-204	ENST00000456983	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.3	□□□□□ -0.6
COL21A1-204	ENST00000456983	MKRN3	Q13064	507 aa	Known RBP	11.29	□□□□□ -0.6
COL21A1-204	ENST00000456983	C3orf67	Q6ZVT6	689 aa		11.27	□□□□□ -0.61
COL21A1-204	ENST00000456983	PCDHB8	Q9UN66	801 aa		11.24	□□□□□ -0.61
COL21A1-204	ENST00000456983	CHRM1	P11229	460 aa	Predicted RBP	11.21	□□□□□ -0.61
COL21A1-204	ENST00000456983		G3V3G9	751 aa		11.2	□□□□□ -0.62
COL21A1-204	ENST00000456983	VASP	P50552	380 aa	Predicted RBP	11.18	□□□□□ -0.62
COL21A1-204	ENST00000456983	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
COL21A1-204	ENST00000456983	PSEN1	P49768	467 aa		11.13	□□□□□ -0.63
COL21A1-204	ENST00000456983	PDAP1	Q13442	181 aa	Known RBP	11.12	□□□□□ -0.63
COL21A1-204	ENST00000456983	EMP3	P54852	163 aa		11.11	□□□□□ -0.63
COL21A1-204	ENST00000456983	PDCD7	Q8N8D1	485 aa	Known RBP	11.11	□□□□□ -0.63
COL21A1-204	ENST00000456983	MMRN1	Q13201	1228 aa		11.08	□□□□□ -0.64
COL21A1-204	ENST00000456983	SPNS2	Q8IVW8	549 aa		11.08	□□□□□ -0.64
COL21A1-204	ENST00000456983	MARVELD3	Q96A59	401 aa		11.07	□□□□□ -0.64
COL21A1-204	ENST00000456983	SPOCK2	Q92563	424 aa		11.06	□□□□□ -0.64
COL21A1-204	ENST00000456983	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.03	□□□□□ -0.64
COL21A1-204	ENST00000456983	TRIM41	Q8WV44	630 aa		11.02	□□□□□ -0.65
COL21A1-204	ENST00000456983	NISCH	Q9Y2I1	1504 aa		11.01	□□□□□ -0.65
COL21A1-204	ENST00000456983	RIMBP2	O15034	1052 aa		10.99	□□□□□ -0.65
COL21A1-204	ENST00000456983	ZNF710	Q8N1W2	664 aa		10.99	□□□□□ -0.65
COL21A1-204	ENST00000456983	CABP2	Q9NPB3	220 aa		10.99	□□□□□ -0.65
COL21A1-204	ENST00000456983	BOLA1	Q9Y3E2	137 aa		10.99	□□□□□ -0.65
COL21A1-204	ENST00000456983	FAM205C	A6NFA0	338 aa		10.97	□□□□□ -0.65
COL21A1-204	ENST00000456983	DOK7	Q18PE1	504 aa		10.97	□□□□□ -0.65
COL21A1-204	ENST00000456983	ILDR1	Q86SU0	546 aa	Predicted RBP	10.97	□□□□□ -0.65
COL21A1-204	ENST00000456983	HS3ST6	Q96QI5	342 aa		10.97	□□□□□ -0.65
COL21A1-204	ENST00000456983	HOXB1	P14653	301 aa	Predicted RBP	10.88	□□□□□ -0.67
COL21A1-204	ENST00000456983	ERBB3	P21860	1342 aa		10.87	□□□□□ -0.67
COL21A1-204	ENST00000456983	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.87	□□□□□ -0.67
COL21A1-204	ENST00000456983	DPY19L2	Q6NUT2	758 aa		10.86	□□□□□ -0.67
COL21A1-204	ENST00000456983	ZSWIM6	Q9HCJ5	1215 aa		10.84	□□□□□ -0.67
COL21A1-204	ENST00000456983	KRTAP3-3	Q9BYR6	98 aa		10.83	□□□□□ -0.68
COL21A1-204	ENST00000456983	KRTAP3-2	Q9BYR7	98 aa		10.83	□□□□□ -0.68
COL21A1-204	ENST00000456983	SOX12	O15370	315 aa		10.81	□□□□□ -0.68
COL21A1-204	ENST00000456983	HOXB3	P14651	431 aa	Predicted RBP	10.81	□□□□□ -0.68
COL21A1-204	ENST00000456983	TAOK2	Q9UL54	1235 aa		10.81	□□□□□ -0.68
COL21A1-204	ENST00000456983	EFCAB3	Q8N7B9	438 aa		10.78	□□□□□ -0.68
COL21A1-204	ENST00000456983	POTEB3	A0JP26	581 aa		10.76	□□□□□ -0.69
COL21A1-204	ENST00000456983	PTGER2	P43116	358 aa		10.76	□□□□□ -0.69
COL21A1-204	ENST00000456983	POTEB	Q6S5H4	581 aa		10.76	□□□□□ -0.69
COL21A1-204	ENST00000456983	RIOK3	O14730	519 aa	Known RBP	10.73	□□□□□ -0.69
COL21A1-204	ENST00000456983	VGF	O15240	615 aa	Predicted RBP	10.73	□□□□□ -0.69
COL21A1-204	ENST00000456983	MICALL2	Q8IY33	904 aa		10.73	□□□□□ -0.69
COL21A1-204	ENST00000456983	RNF166	Q96A37	237 aa	Predicted RBP	10.73	□□□□□ -0.69
COL21A1-204	ENST00000456983	VARS2	Q5ST30	1063 aa	Known RBP	10.72	□□□□□ -0.69
COL21A1-204	ENST00000456983	ZNF687	Q8N1G0	1237 aa		10.7	□□□□□ -0.7

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