RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 RASEFQ8IZ41 740 aa8.93□□□□□ -0.98
RBM39-220ENST00000455343 ZBTB47Q9UFB7 747 aaPredicted RBP8.93□□□□□ -0.98
RBM39-220ENST00000455343 MS4A3Q96HJ5 214 aa8.91□□□□□ -0.98
RBM39-220ENST00000455343 NUBP1P53384 320 aa8.89□□□□□ -0.99
RBM39-220ENST00000455343 KIF12Q96FN5 646 aa8.87□□□□□ -0.99
RBM39-220ENST00000455343 VASPP50552 380 aaPredicted RBP8.86□□□□□ -0.99
RBM39-220ENST00000455343 LHX8Q68G74 356 aa8.86□□□□□ -0.99
RBM39-220ENST00000455343 MAP3K13O43283 966 aa8.82□□□□□ -1
RBM39-220ENST00000455343 FAM212AQ96EL1 285 aa8.82□□□□□ -1
RBM39-220ENST00000455343 ASTLQ6HA08 431 aaPredicted RBP8.81□□□□□ -1
RBM39-220ENST00000455343 ABCC9O60706 1549 aa8.8□□□□□ -1
RBM39-220ENST00000455343 ATMINO43313 823 aaPredicted RBP8.79□□□□□ -1
RBM39-220ENST00000455343 PELP1Q8IZL8 1130 aaKnown RBP8.79□□□□□ -1
RBM39-220ENST00000455343 TRPC6Q9Y210 931 aa8.77□□□□□ -1.01
RBM39-220ENST00000455343 SGIP1Q9BQI5 828 aa8.76□□□□□ -1.01
RBM39-220ENST00000455343 KLHL34Q8N239 644 aa8.75□□□□□ -1.01
RBM39-220ENST00000455343 BMP2KQ9NSY1 1161 aaPredicted RBP8.75□□□□□ -1.01
RBM39-220ENST00000455343 TIE1P35590 1138 aa8.74□□□□□ -1.01
RBM39-220ENST00000455343 ATN1P54259 1190 aaPredicted RBP8.74□□□□□ -1.01
RBM39-220ENST00000455343 PCDHB13Q9Y5F0 798 aa8.74□□□□□ -1.01
RBM39-220ENST00000455343 DCAF8Q5TAQ9 597 aa8.73□□□□□ -1.01
RBM39-220ENST00000455343 SLC39A7Q92504 469 aa8.73□□□□□ -1.01
RBM39-220ENST00000455343 METRNQ9UJH8 293 aa8.72□□□□□ -1.01
RBM39-220ENST00000455343 POTEB2H3BUK9 544 aa8.7□□□□□ -1.02
RBM39-220ENST00000455343 C7P10643 843 aa8.7□□□□□ -1.02
RBM39-220ENST00000455343 IFNL1Q8IU54 200 aa8.7□□□□□ -1.02
RBM39-220ENST00000455343 TTLL13PA6NNM8 815 aa8.69□□□□□ -1.02
RBM39-220ENST00000455343 IFNLR1Q8IU57 520 aaPredicted RBP8.69□□□□□ -1.02
RBM39-220ENST00000455343 PYGBP11216 843 aa8.68□□□□□ -1.02
RBM39-220ENST00000455343 GSE1Q14687 1217 aa8.67□□□□□ -1.02
RBM39-220ENST00000455343 SPOCK2Q92563 424 aa8.65□□□□□ -1.02
RBM39-220ENST00000455343 OTUD5Q96G74 571 aa8.63□□□□□ -1.03
RBM39-220ENST00000455343 TRIM35Q9UPQ4 493 aa8.63□□□□□ -1.03
RBM39-220ENST00000455343 POTEFA5A3E0 1075 aa8.62□□□□□ -1.03
RBM39-220ENST00000455343 TMEM106CQ9BVX2 250 aa8.62□□□□□ -1.03
RBM39-220ENST00000455343 PCDHB8Q9UN66 801 aa8.61□□□□□ -1.03
RBM39-220ENST00000455343 POTEJP0CG39 1038 aa8.6□□□□□ -1.03
RBM39-220ENST00000455343 CHRM1P11229 460 aaPredicted RBP8.6□□□□□ -1.03
RBM39-220ENST00000455343 IER5LQ5T953 404 aa8.59□□□□□ -1.03
RBM39-220ENST00000455343 ZNF467Q7Z7K2 595 aaPredicted RBP8.58□□□□□ -1.04
RBM39-220ENST00000455343 CIZ1Q9ULV3 898 aaPredicted RBP8.57□□□□□ -1.04
RBM39-220ENST00000455343 COLQQ9Y215 455 aaPredicted RBP8.57□□□□□ -1.04
RBM39-220ENST00000455343 SEC24BO95487 1268 aa8.55□□□□□ -1.04
RBM39-220ENST00000455343 MAMSTRQ6ZN01 415 aa8.55□□□□□ -1.04
RBM39-220ENST00000455343 CCDC180Q9P1Z9 1646 aa8.52□□□□□ -1.05
RBM39-220ENST00000455343 IRX5P78411 483 aaPredicted RBP8.51□□□□□ -1.05
RBM39-220ENST00000455343 SCUBE2Q9NQ36 999 aa8.51□□□□□ -1.05
RBM39-220ENST00000455343 PLCG2P16885 1265 aa8.49□□□□□ -1.05
RBM39-220ENST00000455343 PSEN1P49768 467 aa8.49□□□□□ -1.05
RBM39-220ENST00000455343 PDAP1Q13442 181 aaKnown RBP8.48□□□□□ -1.05
RBM39-220ENST00000455343 TRIM41Q8WV44 630 aa8.48□□□□□ -1.05
RBM39-220ENST00000455343 OCEL1Q9H607 264 aa8.45□□□□□ -1.06
RBM39-220ENST00000455343 GOLGA2Q08379 1002 aa8.43□□□□□ -1.06
RBM39-220ENST00000455343 MKRN3Q13064 507 aaKnown RBP8.43□□□□□ -1.06
RBM39-220ENST00000455343 PDCD7Q8N8D1 485 aaKnown RBP8.41□□□□□ -1.06
RBM39-220ENST00000455343 CABP2Q9NPB3 220 aa8.39□□□□□ -1.07
RBM39-220ENST00000455343 RNF25Q96BH1 459 aaPredicted RBP8.38□□□□□ -1.07
RBM39-220ENST00000455343 ILDR1Q86SU0 546 aaPredicted RBP8.37□□□□□ -1.07
RBM39-220ENST00000455343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.37□□□□□ -1.078e-26■■■□□ 15.5
RBM39-220ENST00000455343 RIOK3O14730 519 aaKnown RBP8.36□□□□□ -1.07
RBM39-220ENST00000455343 LCE2DQ5TA82 110 aaPredicted RBP8.36□□□□□ -1.07
RBM39-220ENST00000455343 SLAIN1Q8ND83 568 aa8.36□□□□□ -1.07
RBM39-220ENST00000455343 POTEMA6NI47 508 aa8.34□□□□□ -1.07
RBM39-220ENST00000455343 VGFO15240 615 aaPredicted RBP8.32□□□□□ -1.08
RBM39-220ENST00000455343 POTEGQ6S5H5 508 aa8.32□□□□□ -1.08
RBM39-220ENST00000455343 FAM163AQ96GL9 167 aaPredicted RBP8.32□□□□□ -1.08
RBM39-220ENST00000455343 L3MBTL3Q96JM7 780 aaPredicted RBP8.32□□□□□ -1.08
RBM39-220ENST00000455343 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.32□□□□□ -1.08
RBM39-220ENST00000455343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.31□□□□□ -1.08
RBM39-220ENST00000455343 ZFP91Q96JP5 570 aaPredicted RBP8.31□□□□□ -1.08
RBM39-220ENST00000455343 DPY19L2Q6NUT2 758 aa8.3□□□□□ -1.08
RBM39-220ENST00000455343 EFCAB3Q8N7B9 438 aa8.3□□□□□ -1.08
RBM39-220ENST00000455343 C3orf67Q6ZVT6 689 aa8.29□□□□□ -1.08
RBM39-220ENST00000455343 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
RBM39-220ENST00000455343 PKD2Q13563 968 aa8.26□□□□□ -1.09
RBM39-220ENST00000455343 RB1CC1Q8TDY2 1594 aa8.26□□□□□ -1.09
RBM39-220ENST00000455343 BOLA1Q9Y3E2 137 aa8.25□□□□□ -1.09
RBM39-220ENST00000455343 TAOK2Q9UL54 1235 aa8.24□□□□□ -1.09
RBM39-220ENST00000455343 G3V3G9 751 aa8.23□□□□□ -1.09
RBM39-220ENST00000455343 SOX12O15370 315 aa8.23□□□□□ -1.09
RBM39-220ENST00000455343 ST18O60284 1047 aa8.23□□□□□ -1.09
RBM39-220ENST00000455343 BCL11BQ9C0K0 894 aaPredicted RBP8.23□□□□□ -1.09
RBM39-220ENST00000455343 SNPHO15079 494 aa8.22□□□□□ -1.09
RBM39-220ENST00000455343 RGL2O15211 777 aa8.21□□□□□ -1.1
RBM39-220ENST00000455343 MS4A4AQ96JQ5 239 aa8.21□□□□□ -1.1
RBM39-220ENST00000455343 TMEM121BQ9BXQ6 578 aaPredicted RBP8.21□□□□□ -1.1
RBM39-220ENST00000455343 PHF8Q9UPP1 1060 aa8.21□□□□□ -1.1
RBM39-220ENST00000455343 PCDH10Q9P2E7 1040 aa8.19□□□□□ -1.1
RBM39-220ENST00000455343 STK24Q9Y6E0 443 aa8.19□□□□□ -1.1
RBM39-220ENST00000455343 STK25O00506 426 aa8.18□□□□□ -1.1
RBM39-220ENST00000455343 MICALL2Q8IY33 904 aa8.17□□□□□ -1.1
RBM39-220ENST00000455343 NACADO15069 1562 aa8.17□□□□□ -1.1
RBM39-220ENST00000455343 FBXO22Q8NEZ5 403 aa8.16□□□□□ -1.1
RBM39-220ENST00000455343 NLRP6P59044 892 aa8.15□□□□□ -1.1
RBM39-220ENST00000455343 PLSCR2Q9NRY7 297 aa8.15□□□□□ -1.1
RBM39-220ENST00000455343 MFRPQ9BY79 579 aa8.13□□□□□ -1.11
RBM39-220ENST00000455343 HOXB3P14651 431 aaPredicted RBP8.11□□□□□ -1.11
RBM39-220ENST00000455343 TMEM92Q6UXU6 159 aa8.11□□□□□ -1.11
RBM39-220ENST00000455343 CDAN1Q8IWY9 1227 aa8.11□□□□□ -1.11
RBM39-220ENST00000455343 MARVELD3Q96A59 401 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms