RNA–Protein interactions for RNA: ENST00000451987.5

SPC25-202, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 3

Gene SPC25, Length 596 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-202ENST00000451987 ASTLQ6HA08 431 aaPredicted RBP8.84□□□□□ -0.99
SPC25-202ENST00000451987 ATMINO43313 823 aaPredicted RBP8.79□□□□□ -1
SPC25-202ENST00000451987 PABPN1Q86U42 306 aaKnown RBP eCLIP8.79□□□□□ -1
SPC25-202ENST00000451987 PHF12Q96QT6 1004 aa8.78□□□□□ -1
SPC25-202ENST00000451987 ST18O60284 1047 aa8.73□□□□□ -1.01
SPC25-202ENST00000451987 PAK3O75914 559 aaPredicted RBP8.69□□□□□ -1.02
SPC25-202ENST00000451987 POTEFA5A3E0 1075 aa8.67□□□□□ -1.02
SPC25-202ENST00000451987 MS4A3Q96HJ5 214 aa8.64□□□□□ -1.03
SPC25-202ENST00000451987 CREBZFQ9NS37 354 aa8.61□□□□□ -1.03
SPC25-202ENST00000451987 ATN1P54259 1190 aaPredicted RBP8.6□□□□□ -1.03
SPC25-202ENST00000451987 TMEM121BQ9BXQ6 578 aaPredicted RBP8.56□□□□□ -1.04
SPC25-202ENST00000451987 SLAIN1Q8ND83 568 aa8.51□□□□□ -1.05
SPC25-202ENST00000451987 COLQQ9Y215 455 aaPredicted RBP8.48□□□□□ -1.05
SPC25-202ENST00000451987 CSRNP3Q8WYN3 585 aa8.46□□□□□ -1.06
SPC25-202ENST00000451987 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
SPC25-202ENST00000451987 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
SPC25-202ENST00000451987 MARVELD3Q96A59 401 aa8.44□□□□□ -1.06
SPC25-202ENST00000451987 SEC24BO95487 1268 aa8.43□□□□□ -1.06
SPC25-202ENST00000451987 BMP2KQ9NSY1 1161 aaPredicted RBP8.43□□□□□ -1.06
SPC25-202ENST00000451987 NPM1P06748 294 aaKnown RBP eCLIP8.41□□□□□ -1.06
SPC25-202ENST00000451987 MNX1P50219 401 aaPredicted RBP8.4□□□□□ -1.06
SPC25-202ENST00000451987 SNPHO15079 494 aa8.35□□□□□ -1.07
SPC25-202ENST00000451987 SPDYE4A6NLX3 237 aa8.34□□□□□ -1.07
SPC25-202ENST00000451987 TIE1P35590 1138 aa8.34□□□□□ -1.07
SPC25-202ENST00000451987 STAG3Q9UJ98 1225 aa8.34□□□□□ -1.07
SPC25-202ENST00000451987 TRPC6Q9Y210 931 aa8.33□□□□□ -1.08
SPC25-202ENST00000451987 IER5LQ5T953 404 aa8.31□□□□□ -1.08
SPC25-202ENST00000451987 POTEB3A0JP26 581 aa8.3□□□□□ -1.08
SPC25-202ENST00000451987 POTEBQ6S5H4 581 aa8.3□□□□□ -1.08
SPC25-202ENST00000451987 EMP3P54852 163 aa8.29□□□□□ -1.08
SPC25-202ENST00000451987 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
SPC25-202ENST00000451987 KIF12Q96FN5 646 aa8.28□□□□□ -1.08
SPC25-202ENST00000451987 HS3ST6Q96QI5 342 aa8.28□□□□□ -1.08
SPC25-202ENST00000451987 TTLL13PA6NNM8 815 aa8.26□□□□□ -1.09
SPC25-202ENST00000451987 CCDC61Q9Y6R9 512 aa8.25□□□□□ -1.09
SPC25-202ENST00000451987 FAM205CA6NFA0 338 aa8.22□□□□□ -1.09
SPC25-202ENST00000451987 TSPYL2Q9H2G4 693 aaPredicted RBP8.21□□□□□ -1.1
SPC25-202ENST00000451987 TRIM35Q9UPQ4 493 aa8.2□□□□□ -1.1
SPC25-202ENST00000451987 EHMT2Q96KQ7 1210 aa8.18□□□□□ -1.1
SPC25-202ENST00000451987 MAP3K13O43283 966 aa8.16□□□□□ -1.1
SPC25-202ENST00000451987 PLCG2P16885 1265 aa8.13□□□□□ -1.11
SPC25-202ENST00000451987 PROM2Q8N271 834 aa8.13□□□□□ -1.11
SPC25-202ENST00000451987 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.13□□□□□ -1.11
SPC25-202ENST00000451987 MYT1LQ9UL68 1186 aa8.13□□□□□ -1.11
SPC25-202ENST00000451987 RASEFQ8IZ41 740 aa8.09□□□□□ -1.11
SPC25-202ENST00000451987 IRX5P78411 483 aaPredicted RBP8.07□□□□□ -1.12
SPC25-202ENST00000451987 OCEL1Q9H607 264 aa7.99□□□□□ -1.13
SPC25-202ENST00000451987 SGIP1Q9BQI5 828 aa7.98□□□□□ -1.13
SPC25-202ENST00000451987 MIER1Q8N108 512 aa7.97□□□□□ -1.13
SPC25-202ENST00000451987 PTGER2P43116 358 aa7.95□□□□□ -1.14
SPC25-202ENST00000451987 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
SPC25-202ENST00000451987 IFNL1Q8IU54 200 aa7.94□□□□□ -1.14
SPC25-202ENST00000451987 TMEM106CQ9BVX2 250 aa7.93□□□□□ -1.14
SPC25-202ENST00000451987 PCDHB13Q9Y5F0 798 aa7.93□□□□□ -1.14
SPC25-202ENST00000451987 NUBP1P53384 320 aa7.92□□□□□ -1.14
SPC25-202ENST00000451987 ERBB3P21860 1342 aa7.89□□□□□ -1.15
SPC25-202ENST00000451987 C3orf67Q6ZVT6 689 aa7.88□□□□□ -1.15
SPC25-202ENST00000451987 HOXB1P14653 301 aaPredicted RBP7.87□□□□□ -1.15
SPC25-202ENST00000451987 PLCD3Q8N3E9 789 aa7.85□□□□□ -1.15
SPC25-202ENST00000451987 PLEKHG5O94827 1062 aa7.84□□□□□ -1.15
SPC25-202ENST00000451987 HOXB3P14651 431 aaPredicted RBP7.82□□□□□ -1.16
SPC25-202ENST00000451987 VARS2Q5ST30 1063 aaKnown RBP7.8□□□□□ -1.16
SPC25-202ENST00000451987 ZNF687Q8N1G0 1237 aa7.79□□□□□ -1.16
SPC25-202ENST00000451987 IRX2Q9BZI1 471 aaPredicted RBP7.79□□□□□ -1.16
SPC25-202ENST00000451987 L3MBTL3Q96JM7 780 aaPredicted RBP7.78□□□□□ -1.16
SPC25-202ENST00000451987 PYGBP11216 843 aa7.77□□□□□ -1.17
SPC25-202ENST00000451987 PCDHB8Q9UN66 801 aa7.77□□□□□ -1.17
SPC25-202ENST00000451987 PDCD7Q8N8D1 485 aaKnown RBP7.76□□□□□ -1.17
SPC25-202ENST00000451987 FAM212AQ96EL1 285 aa7.76□□□□□ -1.17
SPC25-202ENST00000451987 ZNF710Q8N1W2 664 aa7.75□□□□□ -1.17
SPC25-202ENST00000451987 HCSTQ9UBK5 93 aa7.73□□□□□ -1.17
SPC25-202ENST00000451987 ANKRD13DQ6ZTN6 518 aa7.72□□□□□ -1.17
SPC25-202ENST00000451987 RGS20O76081 388 aa7.71□□□□□ -1.18
SPC25-202ENST00000451987 ZBTB47Q9UFB7 747 aaPredicted RBP7.71□□□□□ -1.18
SPC25-202ENST00000451987 DCAF8Q5TAQ9 597 aa7.69□□□□□ -1.18
SPC25-202ENST00000451987 DOK7Q18PE1 504 aa7.68□□□□□ -1.18
SPC25-202ENST00000451987 FKBP8Q14318 412 aa7.65□□□□□ -1.18
SPC25-202ENST00000451987 RIMBP2O15034 1052 aa7.61□□□□□ -1.19
SPC25-202ENST00000451987 LSM11P83369 360 aaKnown RBP eCLIP7.61□□□□□ -1.19
SPC25-202ENST00000451987 DPY19L2Q6NUT2 758 aa7.61□□□□□ -1.19
SPC25-202ENST00000451987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.58□□□□□ -1.23e-7■■■■■ 32.9
SPC25-202ENST00000451987 ILDR1Q86SU0 546 aaPredicted RBP7.57□□□□□ -1.2
SPC25-202ENST00000451987 PSEN1P49768 467 aa7.56□□□□□ -1.2
SPC25-202ENST00000451987 MKRN3Q13064 507 aaKnown RBP7.56□□□□□ -1.2
SPC25-202ENST00000451987 ZSWIM6Q9HCJ5 1215 aa7.55□□□□□ -1.2
SPC25-202ENST00000451987 Q6ZNB5 142 aa7.54□□□□□ -1.2
SPC25-202ENST00000451987 GOLGA2Q08379 1002 aa7.53□□□□□ -1.2
SPC25-202ENST00000451987 ZNF467Q7Z7K2 595 aaPredicted RBP7.53□□□□□ -1.2
SPC25-202ENST00000451987 GPR153Q6NV75 609 aa7.51□□□□□ -1.21
SPC25-202ENST00000451987 CHRM1P11229 460 aaPredicted RBP7.5□□□□□ -1.21
SPC25-202ENST00000451987 VASPP50552 380 aaPredicted RBP7.48□□□□□ -1.21
SPC25-202ENST00000451987 GSE1Q14687 1217 aa7.48□□□□□ -1.21
SPC25-202ENST00000451987 KLHL34Q8N239 644 aa7.48□□□□□ -1.21
SPC25-202ENST00000451987 CABP2Q9NPB3 220 aa7.48□□□□□ -1.21
SPC25-202ENST00000451987 IFFO2Q5TF58 517 aa7.47□□□□□ -1.21
SPC25-202ENST00000451987 BOLA1Q9Y3E2 137 aa7.47□□□□□ -1.21
SPC25-202ENST00000451987 PDAP1Q13442 181 aaKnown RBP7.45□□□□□ -1.22
SPC25-202ENST00000451987 G3V3G9 751 aa7.44□□□□□ -1.22
SPC25-202ENST00000451987 PBX2P40425 430 aa7.43□□□□□ -1.22
SPC25-202ENST00000451987 TMEM92Q6UXU6 159 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms