RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 ANP32BQ92688 251 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-205ENST00000450717 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
SMARCA4-205ENST00000450717 HSP90AA1P07900 732 aaKnown RBP17.67■□□□□ 0.42
SMARCA4-205ENST00000450717 KDM2AQ9Y2K7 1162 aa17.67■□□□□ 0.42
SMARCA4-205ENST00000450717 SALL2Q9Y467 1007 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-205ENST00000450717 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
SMARCA4-205ENST00000450717 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-205ENST00000450717 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-205ENST00000450717 PLEKHD1A6NEE1 506 aa17.58■□□□□ 0.4
SMARCA4-205ENST00000450717 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-205ENST00000450717 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
SMARCA4-205ENST00000450717 CFDP1Q9UEE9 299 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-205ENST00000450717 IRX6P78412 446 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-205ENST00000450717 MYH16Q9H6N6 1097 aa17.47■□□□□ 0.39
SMARCA4-205ENST00000450717 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
SMARCA4-205ENST00000450717 DDRGK1Q96HY6 314 aa17.45■□□□□ 0.38
SMARCA4-205ENST00000450717 NBR1Q14596 966 aa17.44■□□□□ 0.38
SMARCA4-205ENST00000450717 KCNH8Q96L42 1107 aa17.42■□□□□ 0.38
SMARCA4-205ENST00000450717 CCNB3Q8WWL7 1395 aa17.41■□□□□ 0.38
SMARCA4-205ENST00000450717 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
SMARCA4-205ENST00000450717 CECR2Q9BXF3 1484 aa17.4■□□□□ 0.38
SMARCA4-205ENST00000450717 CFAP53Q96M91 514 aa17.4■□□□□ 0.38
SMARCA4-205ENST00000450717 CARD11Q9BXL7 1154 aa17.4■□□□□ 0.38
SMARCA4-205ENST00000450717 KNSTRNQ9Y448 316 aa17.39■□□□□ 0.37
SMARCA4-205ENST00000450717 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
SMARCA4-205ENST00000450717 BECN1Q14457 450 aa17.39■□□□□ 0.37
SMARCA4-205ENST00000450717 RGL3Q3MIN7 710 aa17.38■□□□□ 0.37
SMARCA4-205ENST00000450717 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
SMARCA4-205ENST00000450717 PPP1R15AO75807 674 aaPredicted RBP17.35■□□□□ 0.37
SMARCA4-205ENST00000450717 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
SMARCA4-205ENST00000450717 SOGA1O94964 1423 aa17.33■□□□□ 0.36
SMARCA4-205ENST00000450717 SIN3AQ96ST3 1273 aa17.33■□□□□ 0.36
SMARCA4-205ENST00000450717 GLIPR1L2Q4G1C9 344 aa17.32■□□□□ 0.36
SMARCA4-205ENST00000450717 SUPT16HQ9Y5B9 1047 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-205ENST00000450717 ANP32EQ9BTT0 268 aa17.31■□□□□ 0.36
SMARCA4-205ENST00000450717 CUX2O14529 1486 aa17.31■□□□□ 0.36
SMARCA4-205ENST00000450717 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
SMARCA4-205ENST00000450717 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
SMARCA4-205ENST00000450717 SETD5Q9C0A6 1442 aa17.26■□□□□ 0.35
SMARCA4-205ENST00000450717 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
SMARCA4-205ENST00000450717 MROH2BQ7Z745 1585 aa17.24■□□□□ 0.35
SMARCA4-205ENST00000450717 ARHGAP35Q9NRY4 1499 aa17.24■□□□□ 0.35
SMARCA4-205ENST00000450717 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
SMARCA4-205ENST00000450717 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-205ENST00000450717 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
SMARCA4-205ENST00000450717 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
SMARCA4-205ENST00000450717 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
SMARCA4-205ENST00000450717 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
SMARCA4-205ENST00000450717 ARXQ96QS3 562 aa17.21■□□□□ 0.35
SMARCA4-205ENST00000450717 FTSJ3Q8IY81 847 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-205ENST00000450717 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.34
SMARCA4-205ENST00000450717 NCLP19338 710 aaKnown RBP17.21■□□□□ 0.34
SMARCA4-205ENST00000450717 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.34
SMARCA4-205ENST00000450717 CASC1Q6TDU7 716 aa17.19■□□□□ 0.34
SMARCA4-205ENST00000450717 TMF1P82094 1093 aa17.18■□□□□ 0.34
SMARCA4-205ENST00000450717 C14orf37Q86TY3 774 aa17.18■□□□□ 0.34
SMARCA4-205ENST00000450717 CHMP4BQ9H444 224 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-205ENST00000450717 ABCC8Q09428 1581 aa17.17■□□□□ 0.34
SMARCA4-205ENST00000450717 MS4A1P11836 297 aa17.17■□□□□ 0.34
SMARCA4-205ENST00000450717 KANK1Q14678 1352 aa17.16■□□□□ 0.34
SMARCA4-205ENST00000450717 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
SMARCA4-205ENST00000450717 PNNQ9H307 717 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-205ENST00000450717 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
SMARCA4-205ENST00000450717 POGKQ9P215 609 aa17.13■□□□□ 0.33
SMARCA4-205ENST00000450717 TRIM44Q96DX7 344 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-205ENST00000450717 TOP2AP11388 1531 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-205ENST00000450717 DCAF11Q8TEB1 546 aa17.13■□□□□ 0.33
SMARCA4-205ENST00000450717 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-205ENST00000450717 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
SMARCA4-205ENST00000450717 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
SMARCA4-205ENST00000450717 SENP3-EIF4A1A0A087X0R7 540 aa17.1■□□□□ 0.33
SMARCA4-205ENST00000450717 CDK11BP21127 795 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-205ENST00000450717 ARID4BQ4LE39 1312 aaPredicted RBP17.09■□□□□ 0.33
SMARCA4-205ENST00000450717 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-205ENST00000450717 KANK4Q5T7N3 995 aaPredicted RBP17.08■□□□□ 0.33
SMARCA4-205ENST00000450717 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-205ENST00000450717 CARMIL2Q6F5E8 1435 aa17.07■□□□□ 0.32
SMARCA4-205ENST00000450717 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
SMARCA4-205ENST00000450717 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-205ENST00000450717 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
SMARCA4-205ENST00000450717 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
SMARCA4-205ENST00000450717 A0A0G2JS52 829 aa17.04■□□□□ 0.32
SMARCA4-205ENST00000450717 RGS3P49796 1198 aa17.04■□□□□ 0.32
SMARCA4-205ENST00000450717 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
SMARCA4-205ENST00000450717 KTN1Q86UP2 1357 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-205ENST00000450717 PKD2Q13563 968 aa17.02■□□□□ 0.32
SMARCA4-205ENST00000450717 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.32
SMARCA4-205ENST00000450717 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-205ENST00000450717 U2SURPO15042 1029 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-205ENST00000450717 WIZO95785 1651 aa17.01■□□□□ 0.31
SMARCA4-205ENST00000450717 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
SMARCA4-205ENST00000450717 HDGFP51858 240 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-205ENST00000450717 MPHOSPH9Q99550 1183 aa16.99■□□□□ 0.31
SMARCA4-205ENST00000450717 ANKRD30AQ9BXX3 1397 aa16.98■□□□□ 0.31
SMARCA4-205ENST00000450717 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-205ENST00000450717 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
SMARCA4-205ENST00000450717 RALBP1Q15311 655 aa16.98■□□□□ 0.31
SMARCA4-205ENST00000450717 RAPGEF2Q9Y4G8 1499 aa16.97■□□□□ 0.31
SMARCA4-205ENST00000450717 HAP1P54257 671 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-205ENST00000450717 PTMAP06454 111 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms