RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 POTEIP0CG38 1075 aa17.87■□□□□ 0.45
COPS7B-214ENST00000449784 DCBLD2Q96PD2 775 aa17.82■□□□□ 0.44
COPS7B-214ENST00000449784 PHF12Q96QT6 1004 aa17.82■□□□□ 0.44
COPS7B-214ENST00000449784 CLCN6P51797 869 aa17.81■□□□□ 0.44
COPS7B-214ENST00000449784 GALR2O43603 387 aaPredicted RBP17.79■□□□□ 0.44
COPS7B-214ENST00000449784 LHX8Q68G74 356 aa17.78■□□□□ 0.44
COPS7B-214ENST00000449784 FKBP8Q14318 412 aa17.7■□□□□ 0.42
COPS7B-214ENST00000449784 MIER1Q8N108 512 aa17.7■□□□□ 0.42
COPS7B-214ENST00000449784 TSPYL2Q9H2G4 693 aaPredicted RBP17.69■□□□□ 0.42
COPS7B-214ENST00000449784 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
COPS7B-214ENST00000449784 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
COPS7B-214ENST00000449784 PLCD3Q8N3E9 789 aa17.58■□□□□ 0.4
COPS7B-214ENST00000449784 MS4A3Q96HJ5 214 aa17.55■□□□□ 0.4
COPS7B-214ENST00000449784 CCDC61Q9Y6R9 512 aa17.48■□□□□ 0.39
COPS7B-214ENST00000449784 RASEFQ8IZ41 740 aa17.47■□□□□ 0.39
COPS7B-214ENST00000449784 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
COPS7B-214ENST00000449784 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
COPS7B-214ENST00000449784 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
COPS7B-214ENST00000449784 KIF12Q96FN5 646 aa17.38■□□□□ 0.37
COPS7B-214ENST00000449784 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
COPS7B-214ENST00000449784 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
COPS7B-214ENST00000449784 ATMINO43313 823 aaPredicted RBP17.33■□□□□ 0.36
COPS7B-214ENST00000449784 MAP3K13O43283 966 aa17.32■□□□□ 0.36
COPS7B-214ENST00000449784 ASTLQ6HA08 431 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-214ENST00000449784 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-214ENST00000449784 POTEB2H3BUK9 544 aa17.31■□□□□ 0.36
COPS7B-214ENST00000449784 TRPC6Q9Y210 931 aa17.3■□□□□ 0.36
COPS7B-214ENST00000449784 METRNQ9UJH8 293 aa17.28■□□□□ 0.36
COPS7B-214ENST00000449784 NUBP1P53384 320 aa17.27■□□□□ 0.36
COPS7B-214ENST00000449784 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
COPS7B-214ENST00000449784 ATAD2BQ9ULI0 1458 aa17.25■□□□□ 0.35
COPS7B-214ENST00000449784 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
COPS7B-214ENST00000449784 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
COPS7B-214ENST00000449784 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
COPS7B-214ENST00000449784 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
COPS7B-214ENST00000449784 SLC39A7Q92504 469 aa17.22■□□□□ 0.35
COPS7B-214ENST00000449784 OTUD5Q96G74 571 aa17.21■□□□□ 0.35
COPS7B-214ENST00000449784 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
COPS7B-214ENST00000449784 FBXO3Q9UK99 471 aa17.2■□□□□ 0.34
COPS7B-214ENST00000449784 FAM212AQ96EL1 285 aa17.18■□□□□ 0.34
COPS7B-214ENST00000449784 C7P10643 843 aa17.17■□□□□ 0.34
COPS7B-214ENST00000449784 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
COPS7B-214ENST00000449784 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
COPS7B-214ENST00000449784 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
COPS7B-214ENST00000449784 TIE1P35590 1138 aa17.11■□□□□ 0.33
COPS7B-214ENST00000449784 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
COPS7B-214ENST00000449784 DCAF8Q5TAQ9 597 aa17.1■□□□□ 0.33
COPS7B-214ENST00000449784 TTLL13PA6NNM8 815 aa17.08■□□□□ 0.32
COPS7B-214ENST00000449784 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
COPS7B-214ENST00000449784 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
COPS7B-214ENST00000449784 IFNL1Q8IU54 200 aa17.06■□□□□ 0.32
COPS7B-214ENST00000449784 WIZO95785 1651 aa17.05■□□□□ 0.32
COPS7B-214ENST00000449784 VASPP50552 380 aaPredicted RBP17.05■□□□□ 0.32
COPS7B-214ENST00000449784 PYGBP11216 843 aa17.02■□□□□ 0.32
COPS7B-214ENST00000449784 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
COPS7B-214ENST00000449784 POTEFA5A3E0 1075 aa17■□□□□ 0.31
COPS7B-214ENST00000449784 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
COPS7B-214ENST00000449784 SEC24BO95487 1268 aa16.97■□□□□ 0.31
COPS7B-214ENST00000449784 TMEM106CQ9BVX2 250 aa16.95■□□□□ 0.3
COPS7B-214ENST00000449784 COLQQ9Y215 455 aaPredicted RBP16.94■□□□□ 0.3
COPS7B-214ENST00000449784 TOP2AP11388 1531 aaKnown RBP16.93■□□□□ 0.3
COPS7B-214ENST00000449784 MAMSTRQ6ZN01 415 aa16.92■□□□□ 0.3
COPS7B-214ENST00000449784 SCUBE2Q9NQ36 999 aa16.89■□□□□ 0.29
COPS7B-214ENST00000449784 PCDHB8Q9UN66 801 aa16.89■□□□□ 0.29
COPS7B-214ENST00000449784 GSE1Q14687 1217 aa16.81■□□□□ 0.28
COPS7B-214ENST00000449784 IER5LQ5T953 404 aa16.81■□□□□ 0.28
COPS7B-214ENST00000449784 IFNLR1Q8IU57 520 aaPredicted RBP16.76■□□□□ 0.27
COPS7B-214ENST00000449784 POTEMA6NI47 508 aa16.75■□□□□ 0.27
COPS7B-214ENST00000449784 PLCG2P16885 1265 aa16.75■□□□□ 0.27
COPS7B-214ENST00000449784 NESP48681 1621 aa16.74■□□□□ 0.27
COPS7B-214ENST00000449784 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
COPS7B-214ENST00000449784 FAM163AQ96GL9 167 aaPredicted RBP16.73■□□□□ 0.27
COPS7B-214ENST00000449784 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
COPS7B-214ENST00000449784 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
COPS7B-214ENST00000449784 POTEGQ6S5H5 508 aa16.72■□□□□ 0.27
COPS7B-214ENST00000449784 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
COPS7B-214ENST00000449784 PLSCR2Q9NRY7 297 aa16.71■□□□□ 0.27
COPS7B-214ENST00000449784 SPOCK2Q92563 424 aa16.7■□□□□ 0.26
COPS7B-214ENST00000449784 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
COPS7B-214ENST00000449784 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
COPS7B-214ENST00000449784 ZNF467Q7Z7K2 595 aaPredicted RBP16.67■□□□□ 0.26
COPS7B-214ENST00000449784 CFTRP13569 1480 aa16.67■□□□□ 0.26
COPS7B-214ENST00000449784 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
COPS7B-214ENST00000449784 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
COPS7B-214ENST00000449784 LCE2DQ5TA82 110 aaPredicted RBP16.6■□□□□ 0.25
COPS7B-214ENST00000449784 SLAIN1Q8ND83 568 aa16.6■□□□□ 0.25
COPS7B-214ENST00000449784 OCEL1Q9H607 264 aa16.6■□□□□ 0.25
COPS7B-214ENST00000449784 CHRM1P11229 460 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-214ENST00000449784 GOLGA2Q08379 1002 aa16.59■□□□□ 0.25
COPS7B-214ENST00000449784 PSEN1P49768 467 aa16.57■□□□□ 0.24
COPS7B-214ENST00000449784 MKRN3Q13064 507 aaKnown RBP16.53■□□□□ 0.24
COPS7B-214ENST00000449784 FANCD2Q9BXW9 1451 aa16.52■□□□□ 0.23
COPS7B-214ENST00000449784 KIF21AQ7Z4S6 1674 aa16.52■□□□□ 0.23
COPS7B-214ENST00000449784 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
COPS7B-214ENST00000449784 THOC2Q8NI27 1593 aaKnown RBP16.48■□□□□ 0.23
COPS7B-214ENST00000449784 PDAP1Q13442 181 aaKnown RBP16.48■□□□□ 0.23
COPS7B-214ENST00000449784 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
COPS7B-214ENST00000449784 PDCD7Q8N8D1 485 aaKnown RBP16.45■□□□□ 0.22
COPS7B-214ENST00000449784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.45■□□□□ 0.22
COPS7B-214ENST00000449784 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms