RNA–Protein interactions for RNA: ENST00000443977.1

PRKD3-204, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-204ENST00000443977 MAMSTRQ6ZN01 415 aa9.43□□□□□ -0.9
PRKD3-204ENST00000443977 POTEMA6NI47 508 aa9.42□□□□□ -0.9
PRKD3-204ENST00000443977 PELP1Q8IZL8 1130 aaKnown RBP9.42□□□□□ -0.9
PRKD3-204ENST00000443977 PLEKHG5O94827 1062 aa9.41□□□□□ -0.9
PRKD3-204ENST00000443977 ATMINO43313 823 aaPredicted RBP9.4□□□□□ -0.9
PRKD3-204ENST00000443977 TSPYL2Q9H2G4 693 aaPredicted RBP9.4□□□□□ -0.9
PRKD3-204ENST00000443977 POTEGQ6S5H5 508 aa9.38□□□□□ -0.91
PRKD3-204ENST00000443977 SCUBE2Q9NQ36 999 aa9.36□□□□□ -0.91
PRKD3-204ENST00000443977 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
PRKD3-204ENST00000443977 PROM2Q8N271 834 aa9.34□□□□□ -0.91
PRKD3-204ENST00000443977 CCDC61Q9Y6R9 512 aa9.34□□□□□ -0.91
PRKD3-204ENST00000443977 ATN1P54259 1190 aaPredicted RBP9.3□□□□□ -0.92
PRKD3-204ENST00000443977 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
PRKD3-204ENST00000443977 TIE1P35590 1138 aa9.27□□□□□ -0.93
PRKD3-204ENST00000443977 MIER1Q8N108 512 aa9.27□□□□□ -0.93
PRKD3-204ENST00000443977 BMP2KQ9NSY1 1161 aaPredicted RBP9.26□□□□□ -0.93
PRKD3-204ENST00000443977 POTEJP0CG39 1038 aa9.25□□□□□ -0.93
PRKD3-204ENST00000443977 MAP3K13O43283 966 aa9.23□□□□□ -0.93
PRKD3-204ENST00000443977 FAM163AQ96GL9 167 aaPredicted RBP9.23□□□□□ -0.93
PRKD3-204ENST00000443977 SEC24BO95487 1268 aa9.22□□□□□ -0.93
PRKD3-204ENST00000443977 PLCD3Q8N3E9 789 aa9.21□□□□□ -0.94
PRKD3-204ENST00000443977 ZBTB47Q9UFB7 747 aaPredicted RBP9.21□□□□□ -0.94
PRKD3-204ENST00000443977 RASEFQ8IZ41 740 aa9.2□□□□□ -0.94
PRKD3-204ENST00000443977 TRPC6Q9Y210 931 aa9.18□□□□□ -0.94
PRKD3-204ENST00000443977 TTLL13PA6NNM8 815 aa9.17□□□□□ -0.94
PRKD3-204ENST00000443977 IER5LQ5T953 404 aa9.17□□□□□ -0.94
PRKD3-204ENST00000443977 SGIP1Q9BQI5 828 aa9.17□□□□□ -0.94
PRKD3-204ENST00000443977 POTEFA5A3E0 1075 aa9.15□□□□□ -0.94
PRKD3-204ENST00000443977 PCDHB13Q9Y5F0 798 aa9.15□□□□□ -0.94
PRKD3-204ENST00000443977 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
PRKD3-204ENST00000443977 TRIM35Q9UPQ4 493 aa9.13□□□□□ -0.95
PRKD3-204ENST00000443977 FAM212AQ96EL1 285 aa9.11□□□□□ -0.95
PRKD3-204ENST00000443977 COLQQ9Y215 455 aaPredicted RBP9.11□□□□□ -0.95
PRKD3-204ENST00000443977 PLCG2P16885 1265 aa9.08□□□□□ -0.96
PRKD3-204ENST00000443977 TMEM106CQ9BVX2 250 aa9.06□□□□□ -0.96
PRKD3-204ENST00000443977 NUBP1P53384 320 aa9.05□□□□□ -0.96
PRKD3-204ENST00000443977 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
PRKD3-204ENST00000443977 IFNL1Q8IU54 200 aa9.04□□□□□ -0.96
PRKD3-204ENST00000443977 CDAN1Q8IWY9 1227 aa9.03□□□□□ -0.96
PRKD3-204ENST00000443977 NISCHQ9Y2I1 1504 aa9□□□□□ -0.97
PRKD3-204ENST00000443977 SNPHO15079 494 aa8.96□□□□□ -0.98
PRKD3-204ENST00000443977 ST18O60284 1047 aa8.96□□□□□ -0.98
PRKD3-204ENST00000443977 IRX5P78411 483 aaPredicted RBP8.96□□□□□ -0.98
PRKD3-204ENST00000443977 DCAF8Q5TAQ9 597 aa8.95□□□□□ -0.98
PRKD3-204ENST00000443977 OCEL1Q9H607 264 aa8.95□□□□□ -0.98
PRKD3-204ENST00000443977 TMEM121BQ9BXQ6 578 aaPredicted RBP8.94□□□□□ -0.98
PRKD3-204ENST00000443977 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.94□□□□□ -0.98
PRKD3-204ENST00000443977 FKBP8Q14318 412 aa8.92□□□□□ -0.98
PRKD3-204ENST00000443977 PYGBP11216 843 aa8.91□□□□□ -0.98
PRKD3-204ENST00000443977 FBXO3Q9UK99 471 aa8.9□□□□□ -0.98
PRKD3-204ENST00000443977 GOLGA2Q08379 1002 aa8.89□□□□□ -0.99
PRKD3-204ENST00000443977 C3orf67Q6ZVT6 689 aa8.87□□□□□ -0.99
PRKD3-204ENST00000443977 ZNF467Q7Z7K2 595 aaPredicted RBP8.86□□□□□ -0.99
PRKD3-204ENST00000443977 PCDHB8Q9UN66 801 aa8.86□□□□□ -0.99
PRKD3-204ENST00000443977 GSE1Q14687 1217 aa8.85□□□□□ -0.99
PRKD3-204ENST00000443977 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
PRKD3-204ENST00000443977 L3MBTL3Q96JM7 780 aaPredicted RBP8.83□□□□□ -1
PRKD3-204ENST00000443977 KLHL34Q8N239 644 aa8.82□□□□□ -1
PRKD3-204ENST00000443977 MMRN1Q13201 1228 aa8.81□□□□□ -1
PRKD3-204ENST00000443977 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
PRKD3-204ENST00000443977 MARVELD3Q96A59 401 aa8.8□□□□□ -1
PRKD3-204ENST00000443977 EMP3P54852 163 aa8.79□□□□□ -1
PRKD3-204ENST00000443977 PDCD7Q8N8D1 485 aaKnown RBP8.77□□□□□ -1.01
PRKD3-204ENST00000443977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.76□□□□□ -1.015e-7■■■□□ 15.4
PRKD3-204ENST00000443977 G3V3G9 751 aa8.75□□□□□ -1.01
PRKD3-204ENST00000443977 PSEN1P49768 467 aa8.74□□□□□ -1.01
PRKD3-204ENST00000443977 VASPP50552 380 aaPredicted RBP8.74□□□□□ -1.01
PRKD3-204ENST00000443977 CHRM1P11229 460 aaPredicted RBP8.73□□□□□ -1.01
PRKD3-204ENST00000443977 PDAP1Q13442 181 aaKnown RBP8.7□□□□□ -1.02
PRKD3-204ENST00000443977 HS3ST6Q96QI5 342 aa8.69□□□□□ -1.02
PRKD3-204ENST00000443977 FAM205CA6NFA0 338 aa8.68□□□□□ -1.02
PRKD3-204ENST00000443977 BOLA1Q9Y3E2 137 aa8.64□□□□□ -1.03
PRKD3-204ENST00000443977 ZNF710Q8N1W2 664 aa8.63□□□□□ -1.03
PRKD3-204ENST00000443977 CABP2Q9NPB3 220 aa8.63□□□□□ -1.03
PRKD3-204ENST00000443977 ILDR1Q86SU0 546 aaPredicted RBP8.62□□□□□ -1.03
PRKD3-204ENST00000443977 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
PRKD3-204ENST00000443977 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
PRKD3-204ENST00000443977 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
PRKD3-204ENST00000443977 CIZ1Q9ULV3 898 aaPredicted RBP8.61□□□□□ -1.03
PRKD3-204ENST00000443977 DOK7Q18PE1 504 aa8.6□□□□□ -1.03
PRKD3-204ENST00000443977 RIMBP2O15034 1052 aa8.59□□□□□ -1.03
PRKD3-204ENST00000443977 DPY19L2Q6NUT2 758 aa8.58□□□□□ -1.04
PRKD3-204ENST00000443977 POTEB3A0JP26 581 aa8.57□□□□□ -1.04
PRKD3-204ENST00000443977 POTEBQ6S5H4 581 aa8.57□□□□□ -1.04
PRKD3-204ENST00000443977 ERBB3P21860 1342 aa8.56□□□□□ -1.04
PRKD3-204ENST00000443977 HOXB1P14653 301 aaPredicted RBP8.56□□□□□ -1.04
PRKD3-204ENST00000443977 HOXB3P14651 431 aaPredicted RBP8.55□□□□□ -1.04
PRKD3-204ENST00000443977 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
PRKD3-204ENST00000443977 RNF166Q96A37 237 aaPredicted RBP8.5□□□□□ -1.05
PRKD3-204ENST00000443977 VARS2Q5ST30 1063 aaKnown RBP8.48□□□□□ -1.05
PRKD3-204ENST00000443977 IFNLR1Q8IU57 520 aaPredicted RBP8.48□□□□□ -1.05
PRKD3-204ENST00000443977 ZSWIM6Q9HCJ5 1215 aa8.48□□□□□ -1.05
PRKD3-204ENST00000443977 EFCAB3Q8N7B9 438 aa8.47□□□□□ -1.05
PRKD3-204ENST00000443977 PTGER2P43116 358 aa8.45□□□□□ -1.06
PRKD3-204ENST00000443977 MYT1LQ9UL68 1186 aa8.45□□□□□ -1.06
PRKD3-204ENST00000443977 MICALL2Q8IY33 904 aa8.44□□□□□ -1.06
PRKD3-204ENST00000443977 SOX12O15370 315 aa8.42□□□□□ -1.06
PRKD3-204ENST00000443977 ZNF687Q8N1G0 1237 aa8.41□□□□□ -1.06
PRKD3-204ENST00000443977 RIOK3O14730 519 aaKnown RBP8.38□□□□□ -1.07
PRKD3-204ENST00000443977 VGFO15240 615 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms