RNA–Protein interactions for RNA: ENST00000442985.1

SPEN-203, Transcript of spen family transcriptional repressor, humanhuman

TSL 5

Gene SPEN, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-203ENST00000442985 BICRAQ9NZM4 1560 aa10.12□□□□□ -0.79
SPEN-203ENST00000442985 NUBP1P53384 320 aa10.1□□□□□ -0.79
SPEN-203ENST00000442985 SP7Q8TDD2 431 aaPredicted RBP10.1□□□□□ -0.79
SPEN-203ENST00000442985 MYO15BQ96JP2 1530 aa10.07□□□□□ -0.8
SPEN-203ENST00000442985 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
SPEN-203ENST00000442985 DCAF8Q5TAQ9 597 aa10.04□□□□□ -0.8
SPEN-203ENST00000442985 RASEFQ8IZ41 740 aa10.02□□□□□ -0.81
SPEN-203ENST00000442985 RTN4Q9NQC3 1192 aaKnown RBP10.02□□□□□ -0.81
SPEN-203ENST00000442985 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
SPEN-203ENST00000442985 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
SPEN-203ENST00000442985 CLCN6P51797 869 aa9.99□□□□□ -0.81
SPEN-203ENST00000442985 TAOK2Q9UL54 1235 aa9.99□□□□□ -0.81
SPEN-203ENST00000442985 C19orf67A6NJJ6 358 aa9.98□□□□□ -0.81
SPEN-203ENST00000442985 ECM2O94769 699 aaPredicted RBP9.98□□□□□ -0.81
SPEN-203ENST00000442985 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
SPEN-203ENST00000442985 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.82
SPEN-203ENST00000442985 HAX1O00165 279 aa9.95□□□□□ -0.82
SPEN-203ENST00000442985 PKD2Q13563 968 aa9.94□□□□□ -0.82
SPEN-203ENST00000442985 ZRANB1Q9UGI0 708 aa9.94□□□□□ -0.82
SPEN-203ENST00000442985 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
SPEN-203ENST00000442985 DCAF1Q9Y4B6 1507 aa9.92□□□□□ -0.82
SPEN-203ENST00000442985 ZNF579Q8NAF0 562 aaKnown RBP9.92□□□□□ -0.82
SPEN-203ENST00000442985 SGIP1Q9BQI5 828 aa9.92□□□□□ -0.82
SPEN-203ENST00000442985 CCDC61Q9Y6R9 512 aa9.92□□□□□ -0.82
SPEN-203ENST00000442985 CC2D2AQ9P2K1 1620 aa9.91□□□□□ -0.82
SPEN-203ENST00000442985 ZNF467Q7Z7K2 595 aaPredicted RBP9.9□□□□□ -0.82
SPEN-203ENST00000442985 CECR2Q9BXF3 1484 aa9.89□□□□□ -0.83
SPEN-203ENST00000442985 SHROOM4Q9ULL8 1493 aa9.89□□□□□ -0.83
SPEN-203ENST00000442985 EIF4G1Q04637 1599 aaKnown RBP9.86□□□□□ -0.83
SPEN-203ENST00000442985 RIOK3O14730 519 aaKnown RBP9.85□□□□□ -0.83
SPEN-203ENST00000442985 PYGBP11216 843 aa9.85□□□□□ -0.83
SPEN-203ENST00000442985 VGFO15240 615 aaPredicted RBP9.82□□□□□ -0.84
SPEN-203ENST00000442985 KIF12Q96FN5 646 aa9.82□□□□□ -0.84
SPEN-203ENST00000442985 PCDHB13Q9Y5F0 798 aa9.82□□□□□ -0.84
SPEN-203ENST00000442985 PHF12Q96QT6 1004 aa9.78□□□□□ -0.84
SPEN-203ENST00000442985 RGL2O15211 777 aa9.77□□□□□ -0.85
SPEN-203ENST00000442985 MAP3K13O43283 966 aa9.77□□□□□ -0.85
SPEN-203ENST00000442985 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
SPEN-203ENST00000442985 RNF25Q96BH1 459 aaPredicted RBP9.73□□□□□ -0.85
SPEN-203ENST00000442985 IFNL1Q8IU54 200 aa9.72□□□□□ -0.85
SPEN-203ENST00000442985 MS4A3Q96HJ5 214 aa9.71□□□□□ -0.86
SPEN-203ENST00000442985 HS6ST3Q8IZP7 471 aa9.7□□□□□ -0.86
SPEN-203ENST00000442985 TIE1P35590 1138 aa9.69□□□□□ -0.86
SPEN-203ENST00000442985 PSEN1P49768 467 aa9.69□□□□□ -0.86
SPEN-203ENST00000442985 EVX2Q03828 476 aa9.68□□□□□ -0.86
SPEN-203ENST00000442985 PCDHB8Q9UN66 801 aa9.68□□□□□ -0.86
SPEN-203ENST00000442985 STK25O00506 426 aa9.67□□□□□ -0.86
SPEN-203ENST00000442985 RYDENQ9NUL5 291 aaKnown RBP9.67□□□□□ -0.86
SPEN-203ENST00000442985 CHGAP10645 457 aaKnown RBP9.66□□□□□ -0.86
SPEN-203ENST00000442985 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.65□□□□□ -0.86
SPEN-203ENST00000442985 GABBR2O75899 941 aa9.65□□□□□ -0.86
SPEN-203ENST00000442985 GOLGA2Q08379 1002 aa9.65□□□□□ -0.86
SPEN-203ENST00000442985 ZFP91Q96JP5 570 aaPredicted RBP9.65□□□□□ -0.86
SPEN-203ENST00000442985 DNAJC5Q9H3Z4 198 aa9.64□□□□□ -0.87
SPEN-203ENST00000442985 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.64□□□□□ -0.87
SPEN-203ENST00000442985 GALR2O43603 387 aaPredicted RBP9.63□□□□□ -0.87
SPEN-203ENST00000442985 BCL11BQ9C0K0 894 aaPredicted RBP9.63□□□□□ -0.87
SPEN-203ENST00000442985 BBXQ8WY36 941 aaPredicted RBP9.62□□□□□ -0.87
SPEN-203ENST00000442985 DCBLD2Q96PD2 775 aa9.62□□□□□ -0.87
SPEN-203ENST00000442985 TMEM106CQ9BVX2 250 aa9.62□□□□□ -0.87
SPEN-203ENST00000442985 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
SPEN-203ENST00000442985 PLSCR2Q9NRY7 297 aa9.58□□□□□ -0.88
SPEN-203ENST00000442985 TTLL13PA6NNM8 815 aa9.57□□□□□ -0.88
SPEN-203ENST00000442985 ASTLQ6HA08 431 aaPredicted RBP9.57□□□□□ -0.88
SPEN-203ENST00000442985 BMP2KQ9NSY1 1161 aaPredicted RBP9.57□□□□□ -0.88
SPEN-203ENST00000442985 MKRN3Q13064 507 aaKnown RBP9.56□□□□□ -0.88
SPEN-203ENST00000442985 SOX12O15370 315 aa9.55□□□□□ -0.88
SPEN-203ENST00000442985 IER5LQ5T953 404 aa9.55□□□□□ -0.88
SPEN-203ENST00000442985 CABP2Q9NPB3 220 aa9.54□□□□□ -0.88
SPEN-203ENST00000442985 ATMINO43313 823 aaPredicted RBP9.52□□□□□ -0.89
SPEN-203ENST00000442985 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
SPEN-203ENST00000442985 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
SPEN-203ENST00000442985 NLRP6P59044 892 aa9.5□□□□□ -0.89
SPEN-203ENST00000442985 SLC39A7Q92504 469 aa9.5□□□□□ -0.89
SPEN-203ENST00000442985 TRPC6Q9Y210 931 aa9.5□□□□□ -0.89
SPEN-203ENST00000442985 NCAPD3P42695 1498 aa9.48□□□□□ -0.89
SPEN-203ENST00000442985 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
SPEN-203ENST00000442985 C7P10643 843 aa9.47□□□□□ -0.89
SPEN-203ENST00000442985 ATN1P54259 1190 aaPredicted RBP9.47□□□□□ -0.89
SPEN-203ENST00000442985 EFCAB3Q8N7B9 438 aa9.47□□□□□ -0.89
SPEN-203ENST00000442985 ERCC6Q03468 1493 aa9.47□□□□□ -0.89
SPEN-203ENST00000442985 ATAD2BQ9ULI0 1458 aa9.47□□□□□ -0.89
SPEN-203ENST00000442985 LHX8Q68G74 356 aa9.46□□□□□ -0.9
SPEN-203ENST00000442985 CUX2O14529 1486 aa9.46□□□□□ -0.9
SPEN-203ENST00000442985 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
SPEN-203ENST00000442985 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
SPEN-203ENST00000442985 NESP48681 1621 aa9.43□□□□□ -0.9
SPEN-203ENST00000442985 PLCG2P16885 1265 aa9.43□□□□□ -0.9
SPEN-203ENST00000442985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.43□□□□□ -0.92e-8■■□□□ 12
SPEN-203ENST00000442985 SEC24BO95487 1268 aa9.42□□□□□ -0.9
SPEN-203ENST00000442985 HMGXB3Q12766 1538 aa9.41□□□□□ -0.9
SPEN-203ENST00000442985 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
SPEN-203ENST00000442985 MFRPQ9BY79 579 aa9.41□□□□□ -0.9
SPEN-203ENST00000442985 OCEL1Q9H607 264 aa9.41□□□□□ -0.9
SPEN-203ENST00000442985 SMARCA2P51531 1590 aa9.41□□□□□ -0.9
SPEN-203ENST00000442985 G3V3G9 751 aa9.4□□□□□ -0.9
SPEN-203ENST00000442985 NKX1-1Q15270 411 aaPredicted RBP9.4□□□□□ -0.9
SPEN-203ENST00000442985 ILDR1Q86SU0 546 aaPredicted RBP9.39□□□□□ -0.91
SPEN-203ENST00000442985 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
SPEN-203ENST00000442985 METRNQ9UJH8 293 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms