RNA–Protein interactions for RNA: ENST00000441841.1

LINC02243-201, Transcript of long intergenic non-protein coding RNA 2243, humanhuman

TSL 1 (best) BASIC

Gene LINC02243, Length 961 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02243-201ENST00000441841 NUBP1P53384 320 aa16.24■□□□□ 0.19
LINC02243-201ENST00000441841 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
LINC02243-201ENST00000441841 DCAF8Q5TAQ9 597 aa16.14■□□□□ 0.17
LINC02243-201ENST00000441841 CCDC180Q9P1Z9 1646 aa16.14■□□□□ 0.17
LINC02243-201ENST00000441841 RIOK3O14730 519 aaKnown RBP16.13■□□□□ 0.17
LINC02243-201ENST00000441841 SPDYE1Q8NFV5 336 aaPredicted RBP16.12■□□□□ 0.17
LINC02243-201ENST00000441841 NKX1-1Q15270 411 aaPredicted RBP16.11■□□□□ 0.17
LINC02243-201ENST00000441841 NBR1Q14596 966 aa16.07■□□□□ 0.16
LINC02243-201ENST00000441841 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
LINC02243-201ENST00000441841 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
LINC02243-201ENST00000441841 GTPBP6O43824 516 aaPredicted RBP16.04■□□□□ 0.16
LINC02243-201ENST00000441841 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
LINC02243-201ENST00000441841 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
LINC02243-201ENST00000441841 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
LINC02243-201ENST00000441841 STK25O00506 426 aa16■□□□□ 0.15
LINC02243-201ENST00000441841 CHRM1P11229 460 aaPredicted RBP16■□□□□ 0.15
LINC02243-201ENST00000441841 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
LINC02243-201ENST00000441841 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
LINC02243-201ENST00000441841 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
LINC02243-201ENST00000441841 SGIP1Q9BQI5 828 aa15.94■□□□□ 0.14
LINC02243-201ENST00000441841 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
LINC02243-201ENST00000441841 REM2Q8IYK8 340 aaPredicted RBP15.88■□□□□ 0.13
LINC02243-201ENST00000441841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.87■□□□□ 0.13
LINC02243-201ENST00000441841 ZFP91Q96JP5 570 aaPredicted RBP15.87■□□□□ 0.13
LINC02243-201ENST00000441841 BCL11BQ9C0K0 894 aaPredicted RBP15.86■□□□□ 0.13
LINC02243-201ENST00000441841 STK24Q9Y6E0 443 aa15.86■□□□□ 0.13
LINC02243-201ENST00000441841 RYDENQ9NUL5 291 aaKnown RBP15.83■□□□□ 0.12
LINC02243-201ENST00000441841 PYGBP11216 843 aa15.81■□□□□ 0.12
LINC02243-201ENST00000441841 ABCC9O60706 1549 aa15.71■□□□□ 0.11
LINC02243-201ENST00000441841 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
LINC02243-201ENST00000441841 ZNF467Q7Z7K2 595 aaPredicted RBP15.61■□□□□ 0.09
LINC02243-201ENST00000441841 P3H3Q8IVL6 736 aa15.61■□□□□ 0.09
LINC02243-201ENST00000441841 TSPYL2Q9H2G4 693 aaPredicted RBP15.56■□□□□ 0.08
LINC02243-201ENST00000441841 PDAP1Q13442 181 aaKnown RBP15.54■□□□□ 0.08
LINC02243-201ENST00000441841 CADPS2Q86UW7 1296 aa15.54■□□□□ 0.08
LINC02243-201ENST00000441841 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
LINC02243-201ENST00000441841 WDR70Q9NW82 654 aa15.51■□□□□ 0.07
LINC02243-201ENST00000441841 KCNV2Q8TDN2 545 aa15.49■□□□□ 0.07
LINC02243-201ENST00000441841 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
LINC02243-201ENST00000441841 PCDHB8Q9UN66 801 aa15.47■□□□□ 0.07
LINC02243-201ENST00000441841 PCDHB13Q9Y5F0 798 aa15.47■□□□□ 0.07
LINC02243-201ENST00000441841 MFRPQ9BY79 579 aa15.44■□□□□ 0.06
LINC02243-201ENST00000441841 PSEN1P49768 467 aa15.43■□□□□ 0.06
LINC02243-201ENST00000441841 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
LINC02243-201ENST00000441841 CCDC61Q9Y6R9 512 aa15.42■□□□□ 0.06
LINC02243-201ENST00000441841 GTF3C3Q9Y5Q9 886 aa15.4■□□□□ 0.06
LINC02243-201ENST00000441841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.39■□□□□ 0.05
LINC02243-201ENST00000441841 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
LINC02243-201ENST00000441841 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
LINC02243-201ENST00000441841 TULP1O00294 542 aaPredicted RBP15.35■□□□□ 0.05
LINC02243-201ENST00000441841 TMEM132AQ24JP5 1023 aa15.35■□□□□ 0.05
LINC02243-201ENST00000441841 PPP1R37O75864 691 aa15.3■□□□□ 0.04
LINC02243-201ENST00000441841 PRKAR2AP13861 404 aaKnown RBP15.3■□□□□ 0.04
LINC02243-201ENST00000441841 FBXO22Q8NEZ5 403 aa15.28■□□□□ 0.04
LINC02243-201ENST00000441841 ARHGEF1Q92888 912 aaKnown RBP15.28■□□□□ 0.04
LINC02243-201ENST00000441841 IFNL1Q8IU54 200 aa15.27■□□□□ 0.04
LINC02243-201ENST00000441841 NLRP6P59044 892 aa15.26■□□□□ 0.03
LINC02243-201ENST00000441841 EFCAB3Q8N7B9 438 aa15.26■□□□□ 0.03
LINC02243-201ENST00000441841 SOX12O15370 315 aa15.25■□□□□ 0.03
LINC02243-201ENST00000441841 E2F4Q16254 413 aa15.23■□□□□ 0.03
LINC02243-201ENST00000441841 PAK3O75914 559 aaPredicted RBP15.22■□□□□ 0.03
LINC02243-201ENST00000441841 CABP2Q9NPB3 220 aa15.22■□□□□ 0.03
LINC02243-201ENST00000441841 PHF8Q9UPP1 1060 aa15.22■□□□□ 0.03
LINC02243-201ENST00000441841 MAP3K13O43283 966 aa15.21■□□□□ 0.03
LINC02243-201ENST00000441841 FXR2P51116 673 aaKnown RBP eCLIP15.21■□□□□ 0.03
LINC02243-201ENST00000441841 RB1CC1Q8TDY2 1594 aa15.2■□□□□ 0.02
LINC02243-201ENST00000441841 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
LINC02243-201ENST00000441841 ERICH6Q7L0X2 663 aa15.19■□□□□ 0.02
LINC02243-201ENST00000441841 NACADO15069 1562 aa15.17■□□□□ 0.02
LINC02243-201ENST00000441841 TESPA1A2RU30 521 aaPredicted RBP15.14■□□□□ 0.01
LINC02243-201ENST00000441841 ZC3H15Q8WU90 426 aaKnown RBP15.14■□□□□ 0.01
LINC02243-201ENST00000441841 SEMA3EO15041 775 aa15.13■□□□□ 0.01
LINC02243-201ENST00000441841 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
LINC02243-201ENST00000441841 NCKAP5LQ9HCH0 1330 aa15.11■□□□□ 0.01
LINC02243-201ENST00000441841 BRPF1P55201 1214 aaPredicted RBP15.1■□□□□ 0.01
LINC02243-201ENST00000441841 PDE4AP27815 886 aa15.06■□□□□ 0
LINC02243-201ENST00000441841 MFSD10Q14728 455 aa15.05■□□□□ -0
LINC02243-201ENST00000441841 MS4A4AQ96JQ5 239 aa15.05■□□□□ -0
LINC02243-201ENST00000441841 LARP6Q9BRS8 491 aaKnown RBP15.05■□□□□ -0
LINC02243-201ENST00000441841 CRISPLD2Q9H0B8 497 aa15.02■□□□□ -0
LINC02243-201ENST00000441841 SLC24A3Q9HC58 644 aa15□□□□□ -0.01
LINC02243-201ENST00000441841 ARIH1Q9Y4X5 557 aaPredicted RBP15□□□□□ -0.01
LINC02243-201ENST00000441841 PIP4P2Q8N4L2 257 aa14.99□□□□□ -0.01
LINC02243-201ENST00000441841 ZRANB1Q9UGI0 708 aa14.99□□□□□ -0.01
LINC02243-201ENST00000441841 SMYD5Q6GMV2 418 aa14.98□□□□□ -0.01
LINC02243-201ENST00000441841 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
LINC02243-201ENST00000441841 DDX27Q96GQ7 796 aaKnown RBP14.97□□□□□ -0.01
LINC02243-201ENST00000441841 NEUROD2Q15784 382 aa14.96□□□□□ -0.01
LINC02243-201ENST00000441841 ZCCHC6Q5VYS8 1495 aaKnown RBP14.95□□□□□ -0.02
LINC02243-201ENST00000441841 ZMYND10O75800 440 aa14.95□□□□□ -0.02
LINC02243-201ENST00000441841 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
LINC02243-201ENST00000441841 C14orf37Q86TY3 774 aa14.95□□□□□ -0.02
LINC02243-201ENST00000441841 PHF12Q96QT6 1004 aa14.94□□□□□ -0.02
LINC02243-201ENST00000441841 CAMK2BQ13554 666 aa14.93□□□□□ -0.02
LINC02243-201ENST00000441841 CD44P16070 742 aaKnown RBP14.92□□□□□ -0.02
LINC02243-201ENST00000441841 GOLGA2Q08379 1002 aa14.92□□□□□ -0.02
LINC02243-201ENST00000441841 TMEM106CQ9BVX2 250 aa14.91□□□□□ -0.02
LINC02243-201ENST00000441841 MKRN3Q13064 507 aaKnown RBP14.85□□□□□ -0.03
LINC02243-201ENST00000441841 BARGINQ6ZT62 677 aa14.85□□□□□ -0.03
LINC02243-201ENST00000441841 ARXQ96QS3 562 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms