RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ZBTB47Q9UFB7 747 aaPredicted RBP9.7□□□□□ -0.86
ALMS1-IT1-201ENST00000441587 GTPBP6O43824 516 aaPredicted RBP9.68□□□□□ -0.86
ALMS1-IT1-201ENST00000441587 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
ALMS1-IT1-201ENST00000441587 PLEKHG5O94827 1062 aa9.68□□□□□ -0.86
ALMS1-IT1-201ENST00000441587 ZBTB12Q9Y330 459 aaPredicted RBP9.68□□□□□ -0.86
ALMS1-IT1-201ENST00000441587 EIF5BO60841 1220 aaKnown RBP9.67□□□□□ -0.86
ALMS1-IT1-201ENST00000441587 P3H3Q8IVL6 736 aa9.67□□□□□ -0.86
ALMS1-IT1-201ENST00000441587 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
ALMS1-IT1-201ENST00000441587 ZNF692Q9BU19 519 aaPredicted RBP9.64□□□□□ -0.87
ALMS1-IT1-201ENST00000441587 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
ALMS1-IT1-201ENST00000441587 RNF25Q96BH1 459 aaPredicted RBP9.62□□□□□ -0.87
ALMS1-IT1-201ENST00000441587 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
ALMS1-IT1-201ENST00000441587 SPINK5Q9NQ38 1064 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-IT1-201ENST00000441587 GSE1Q14687 1217 aa9.56□□□□□ -0.88
ALMS1-IT1-201ENST00000441587 STK25O00506 426 aa9.56□□□□□ -0.88
ALMS1-IT1-201ENST00000441587 RIOK3O14730 519 aaKnown RBP9.56□□□□□ -0.88
ALMS1-IT1-201ENST00000441587 NEUROD2Q15784 382 aa9.56□□□□□ -0.88
ALMS1-IT1-201ENST00000441587 RYDENQ9NUL5 291 aaKnown RBP9.55□□□□□ -0.88
ALMS1-IT1-201ENST00000441587 CAPN15O75808 1086 aa9.55□□□□□ -0.88
ALMS1-IT1-201ENST00000441587 PABPN1Q86U42 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
ALMS1-IT1-201ENST00000441587 UBTFP17480 764 aaKnown RBP9.53□□□□□ -0.88
ALMS1-IT1-201ENST00000441587 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
ALMS1-IT1-201ENST00000441587 SSUH2Q9Y2M2 353 aa9.5□□□□□ -0.89
ALMS1-IT1-201ENST00000441587 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
ALMS1-IT1-201ENST00000441587 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
ALMS1-IT1-201ENST00000441587 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
ALMS1-IT1-201ENST00000441587 NPM2Q86SE8 214 aaKnown RBP9.49□□□□□ -0.89
ALMS1-IT1-201ENST00000441587 KCNV2Q8TDN2 545 aa9.49□□□□□ -0.89
ALMS1-IT1-201ENST00000441587 TRIM26Q12899 539 aaPredicted RBP9.49□□□□□ -0.89
ALMS1-IT1-201ENST00000441587 VGFO15240 615 aaPredicted RBP9.47□□□□□ -0.89
ALMS1-IT1-201ENST00000441587 ZC3H15Q8WU90 426 aaKnown RBP9.46□□□□□ -0.9
ALMS1-IT1-201ENST00000441587 ABCB7O75027 752 aa9.44□□□□□ -0.9
ALMS1-IT1-201ENST00000441587 SLC24A3Q9HC58 644 aa9.44□□□□□ -0.9
ALMS1-IT1-201ENST00000441587 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
ALMS1-IT1-201ENST00000441587 STK24Q9Y6E0 443 aa9.43□□□□□ -0.9
ALMS1-IT1-201ENST00000441587 BCL11BQ9C0K0 894 aaPredicted RBP9.41□□□□□ -0.9
ALMS1-IT1-201ENST00000441587 OSCARQ8IYS5 282 aa9.4□□□□□ -0.9
ALMS1-IT1-201ENST00000441587 ZMYND15Q9H091 742 aa9.4□□□□□ -0.91
ALMS1-IT1-201ENST00000441587 NUBP1P53384 320 aa9.38□□□□□ -0.91
ALMS1-IT1-201ENST00000441587 HRCP23327 699 aa9.37□□□□□ -0.91
ALMS1-IT1-201ENST00000441587 RSPH6AQ9H0K4 717 aa9.37□□□□□ -0.91
ALMS1-IT1-201ENST00000441587 SGIP1Q9BQI5 828 aa9.37□□□□□ -0.91
ALMS1-IT1-201ENST00000441587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.35□□□□□ -0.91
ALMS1-IT1-201ENST00000441587 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
ALMS1-IT1-201ENST00000441587 CADPS2Q86UW7 1296 aa9.33□□□□□ -0.92
ALMS1-IT1-201ENST00000441587 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
ALMS1-IT1-201ENST00000441587 FAM212AQ96EL1 285 aa9.32□□□□□ -0.92
ALMS1-IT1-201ENST00000441587 ARID3AQ99856 593 aa9.31□□□□□ -0.92
ALMS1-IT1-201ENST00000441587 CHRM1P11229 460 aaPredicted RBP9.3□□□□□ -0.92
ALMS1-IT1-201ENST00000441587 ZMYND10O75800 440 aa9.28□□□□□ -0.92
ALMS1-IT1-201ENST00000441587 SEMA3EO15041 775 aa9.27□□□□□ -0.93
ALMS1-IT1-201ENST00000441587 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
ALMS1-IT1-201ENST00000441587 E2F4Q16254 413 aa9.23□□□□□ -0.93
ALMS1-IT1-201ENST00000441587 IL27Q8NEV9 243 aa9.23□□□□□ -0.93
ALMS1-IT1-201ENST00000441587 SMYD5Q6GMV2 418 aa9.22□□□□□ -0.93
ALMS1-IT1-201ENST00000441587 RNF39Q9H2S5 420 aa9.22□□□□□ -0.93
ALMS1-IT1-201ENST00000441587 GPBP1L1Q9HC44 474 aaPredicted RBP9.2□□□□□ -0.94
ALMS1-IT1-201ENST00000441587 ZBTB7CA1YPR0 619 aa9.2□□□□□ -0.94
ALMS1-IT1-201ENST00000441587 CCDC9Q9Y3X0 531 aaKnown RBP9.2□□□□□ -0.94
ALMS1-IT1-201ENST00000441587 BARGINQ6ZT62 677 aa9.19□□□□□ -0.94
ALMS1-IT1-201ENST00000441587 AK7Q96M32 723 aa9.19□□□□□ -0.94
ALMS1-IT1-201ENST00000441587 C1QBPQ07021 282 aaKnown RBP9.18□□□□□ -0.94
ALMS1-IT1-201ENST00000441587 PYGBP11216 843 aa9.17□□□□□ -0.94
ALMS1-IT1-201ENST00000441587 PDIA4P13667 645 aaKnown RBP9.17□□□□□ -0.94
ALMS1-IT1-201ENST00000441587 C1orf115Q9H7X2 142 aa9.17□□□□□ -0.94
ALMS1-IT1-201ENST00000441587 KDM4CQ9H3R0 1056 aa9.14□□□□□ -0.95
ALMS1-IT1-201ENST00000441587 APBB1O00213 710 aa9.14□□□□□ -0.95
ALMS1-IT1-201ENST00000441587 KRI1Q8N9T8 703 aaKnown RBP9.13□□□□□ -0.95
ALMS1-IT1-201ENST00000441587 PLSCR2Q9NRY7 297 aa9.13□□□□□ -0.95
ALMS1-IT1-201ENST00000441587 ARID3CA6NKF2 412 aa9.13□□□□□ -0.95
ALMS1-IT1-201ENST00000441587 RASEFQ8IZ41 740 aa9.13□□□□□ -0.95
ALMS1-IT1-201ENST00000441587 DSG3P32926 999 aa9.11□□□□□ -0.95
ALMS1-IT1-201ENST00000441587 MKRN3Q13064 507 aaKnown RBP9.1□□□□□ -0.95
ALMS1-IT1-201ENST00000441587 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 MFRPQ9BY79 579 aa9.07□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 PDE4DQ08499 809 aa9.05□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 ZNF467Q7Z7K2 595 aaPredicted RBP9.05□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 FLIIQ13045 1269 aa9.04□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 CREBZFQ9NS37 354 aa9.04□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 TRIM66O15016 1216 aa9.04□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 LOC105371045A0A1W2PR82 267 aa9.03□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 PDAP1Q13442 181 aaKnown RBP9.03□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 NECTIN2Q92692 538 aa9.03□□□□□ -0.96
ALMS1-IT1-201ENST00000441587 ZNF316A6NFI3 1004 aaPredicted RBP9.01□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 PPP1R37O75864 691 aa9.01□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 RBM26Q5T8P6 1007 aaKnown RBP9.01□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 SPDYE1Q8NFV5 336 aaPredicted RBP8.99□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 PRR29P0C7W0 189 aa8.99□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 LARP6Q9BRS8 491 aaKnown RBP8.99□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 FAM117AQ9C073 453 aa8.99□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 ARIH1Q9Y4X5 557 aaPredicted RBP8.99□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 CCDC82Q8N4S0 544 aa8.98□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 PDE4AP27815 886 aa8.96□□□□□ -0.97
ALMS1-IT1-201ENST00000441587 DDRGK1Q96HY6 314 aa8.96□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 NCKAP5LQ9HCH0 1330 aa8.95□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 CDK11BP21127 795 aaKnown RBP8.95□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 CDK11AQ9UQ88 783 aaPredicted RBP8.95□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 CLEC11AQ9Y240 323 aa8.95□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 NLRP6P59044 892 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms