RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 DHX37Q8IY37 1157 aaKnown RBP8.69□□□□□ -1.02
BDNF-211ENST00000439476 HNRNPUQ00839 825 aaKnown RBP eCLIP8.68□□□□□ -1.02
BDNF-211ENST00000439476 MROH2BQ7Z745 1585 aa8.68□□□□□ -1.02
BDNF-211ENST00000439476 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
BDNF-211ENST00000439476 FGD1P98174 961 aa8.68□□□□□ -1.02
BDNF-211ENST00000439476 CEP164Q9UPV0 1460 aa8.67□□□□□ -1.02
BDNF-211ENST00000439476 HOMEZQ8IX15 550 aa8.66□□□□□ -1.02
BDNF-211ENST00000439476 TONSLQ96HA7 1378 aa8.66□□□□□ -1.02
BDNF-211ENST00000439476 HIRIP3Q9BW71 556 aaPredicted RBP8.66□□□□□ -1.02
BDNF-211ENST00000439476 ZBTB47Q9UFB7 747 aaPredicted RBP8.65□□□□□ -1.02
BDNF-211ENST00000439476 CCDC88BA6NC98 1476 aa8.65□□□□□ -1.02
BDNF-211ENST00000439476 TAF7LQ5H9L4 462 aa8.65□□□□□ -1.03
BDNF-211ENST00000439476 BAZ1AQ9NRL2 1556 aaPredicted RBP8.64□□□□□ -1.03
BDNF-211ENST00000439476 ABCC8Q09428 1581 aa8.64□□□□□ -1.03
BDNF-211ENST00000439476 PAXIP1Q6ZW49 1069 aaPredicted RBP8.63□□□□□ -1.03
BDNF-211ENST00000439476 ZMYND15Q9H091 742 aa8.63□□□□□ -1.03
BDNF-211ENST00000439476 C14orf37Q86TY3 774 aa8.62□□□□□ -1.03
BDNF-211ENST00000439476 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
BDNF-211ENST00000439476 IRX6P78412 446 aaPredicted RBP8.61□□□□□ -1.03
BDNF-211ENST00000439476 RBM10P98175 930 aaKnown RBP8.61□□□□□ -1.03
BDNF-211ENST00000439476 SLC4A1APQ9BWU0 796 aaKnown RBP8.6□□□□□ -1.03
BDNF-211ENST00000439476 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
BDNF-211ENST00000439476 CHMP4AQ9BY43 222 aa8.6□□□□□ -1.03
BDNF-211ENST00000439476 VPS8Q8N3P4 1428 aa8.6□□□□□ -1.03
BDNF-211ENST00000439476 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
BDNF-211ENST00000439476 FAM9BQ8IZU0 186 aa8.59□□□□□ -1.03
BDNF-211ENST00000439476 NEFMP07197 916 aa8.59□□□□□ -1.03
BDNF-211ENST00000439476 WIZO95785 1651 aa8.59□□□□□ -1.03
BDNF-211ENST00000439476 SIN3AQ96ST3 1273 aa8.57□□□□□ -1.04
BDNF-211ENST00000439476 UNC13AQ9UPW8 1703 aa8.56□□□□□ -1.04
BDNF-211ENST00000439476 AAMPQ13685 434 aa8.56□□□□□ -1.04
BDNF-211ENST00000439476 CCNB3Q8WWL7 1395 aa8.55□□□□□ -1.04
BDNF-211ENST00000439476 NBR1Q14596 966 aa8.54□□□□□ -1.04
BDNF-211ENST00000439476 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
BDNF-211ENST00000439476 RBM19Q9Y4C8 960 aaKnown RBP8.54□□□□□ -1.04
BDNF-211ENST00000439476 MRS2Q9HD23 443 aa8.54□□□□□ -1.04
BDNF-211ENST00000439476 CANXP27824 592 aaKnown RBP8.53□□□□□ -1.04
BDNF-211ENST00000439476 KANK4Q5T7N3 995 aaPredicted RBP8.53□□□□□ -1.04
BDNF-211ENST00000439476 NAP1L5Q96NT1 182 aaPredicted RBP8.53□□□□□ -1.04
BDNF-211ENST00000439476 RUSC2Q8N2Y8 1516 aa8.52□□□□□ -1.05
BDNF-211ENST00000439476 ARID3CA6NKF2 412 aa8.51□□□□□ -1.05
BDNF-211ENST00000439476 ANP32BQ92688 251 aaKnown RBP8.51□□□□□ -1.05
BDNF-211ENST00000439476 CHIC2Q9UKJ5 165 aa8.51□□□□□ -1.05
BDNF-211ENST00000439476 BICRAQ9NZM4 1560 aa8.5□□□□□ -1.05
BDNF-211ENST00000439476 EIF4G2P78344 907 aaKnown RBP eCLIP8.5□□□□□ -1.05
BDNF-211ENST00000439476 KIF27Q86VH2 1401 aa8.5□□□□□ -1.05
BDNF-211ENST00000439476 CCER2I3L3R5 266 aa8.5□□□□□ -1.05
BDNF-211ENST00000439476 TOP2AP11388 1531 aaKnown RBP8.49□□□□□ -1.05
BDNF-211ENST00000439476 DHX57Q6P158 1386 aaKnown RBP8.49□□□□□ -1.05
BDNF-211ENST00000439476 UPF2Q9HAU5 1272 aaKnown RBP8.49□□□□□ -1.05
BDNF-211ENST00000439476 MTUS2Q5JR59 1369 aa8.49□□□□□ -1.05
BDNF-211ENST00000439476 BRD2P25440 801 aaKnown RBP8.49□□□□□ -1.05
BDNF-211ENST00000439476 BAZ1BQ9UIG0 1483 aaKnown RBP8.49□□□□□ -1.05
BDNF-211ENST00000439476 KCNH8Q96L42 1107 aa8.48□□□□□ -1.05
BDNF-211ENST00000439476 PPP4R2Q9NY27 417 aa8.47□□□□□ -1.05
BDNF-211ENST00000439476 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
BDNF-211ENST00000439476 RAB3GAP2Q9H2M9 1393 aa8.46□□□□□ -1.05
BDNF-211ENST00000439476 TMC1Q8TDI8 760 aa8.46□□□□□ -1.06
BDNF-211ENST00000439476 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.06
BDNF-211ENST00000439476 RRP7BPQ9NSQ0 103 aa8.45□□□□□ -1.06
BDNF-211ENST00000439476 RAPGEF2Q9Y4G8 1499 aa8.45□□□□□ -1.06
BDNF-211ENST00000439476 B4GALNT3Q6L9W6 998 aa8.43□□□□□ -1.06
BDNF-211ENST00000439476 SMARCA4P51532 1647 aa8.43□□□□□ -1.06
BDNF-211ENST00000439476 ZNF777Q9ULD5 760 aaPredicted RBP8.42□□□□□ -1.06
BDNF-211ENST00000439476 PPP1R15AO75807 674 aaPredicted RBP8.41□□□□□ -1.06
BDNF-211ENST00000439476 TPRNQ4KMQ1 711 aa8.41□□□□□ -1.06
BDNF-211ENST00000439476 NOP58Q9Y2X3 529 aaKnown RBP8.41□□□□□ -1.06
BDNF-211ENST00000439476 SAMD1Q6SPF0 538 aaPredicted RBP8.4□□□□□ -1.06
BDNF-211ENST00000439476 SENP3-EIF4A1A0A087X0R7 540 aa8.4□□□□□ -1.07
BDNF-211ENST00000439476 NAP1L2Q9ULW6 460 aaPredicted RBP8.39□□□□□ -1.07
BDNF-211ENST00000439476 FHAD1B1AJZ9 1412 aa8.39□□□□□ -1.07
BDNF-211ENST00000439476 AMER1Q5JTC6 1135 aaPredicted RBP8.39□□□□□ -1.07
BDNF-211ENST00000439476 CDK11BP21127 795 aaKnown RBP8.39□□□□□ -1.07
BDNF-211ENST00000439476 TAOK2Q9UL54 1235 aa8.39□□□□□ -1.07
BDNF-211ENST00000439476 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
BDNF-211ENST00000439476 HSP90AA1P07900 732 aaKnown RBP8.38□□□□□ -1.07
BDNF-211ENST00000439476 SMARCA2P51531 1590 aa8.37□□□□□ -1.07
BDNF-211ENST00000439476 MSH5O43196 834 aa8.37□□□□□ -1.07
BDNF-211ENST00000439476 CARMIL1Q5VZK9 1371 aa8.37□□□□□ -1.07
BDNF-211ENST00000439476 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
BDNF-211ENST00000439476 HSPA5P11021 654 aaKnown RBP8.36□□□□□ -1.07
BDNF-211ENST00000439476 DDRGK1Q96HY6 314 aa8.36□□□□□ -1.07
BDNF-211ENST00000439476 EIF4G1Q04637 1599 aaKnown RBP8.36□□□□□ -1.07
BDNF-211ENST00000439476 CUX2O14529 1486 aa8.35□□□□□ -1.07
BDNF-211ENST00000439476 BBXQ8WY36 941 aaPredicted RBP8.35□□□□□ -1.07
BDNF-211ENST00000439476 KDM2AQ9Y2K7 1162 aa8.35□□□□□ -1.07
BDNF-211ENST00000439476 FBLN2P98095 1184 aa8.34□□□□□ -1.07
BDNF-211ENST00000439476 ARHGAP35Q9NRY4 1499 aa8.34□□□□□ -1.07
BDNF-211ENST00000439476 ATAD2BQ9ULI0 1458 aa8.33□□□□□ -1.08
BDNF-211ENST00000439476 KIF21BO75037 1637 aa8.33□□□□□ -1.08
BDNF-211ENST00000439476 TSPY4P0CV99 314 aa8.33□□□□□ -1.08
BDNF-211ENST00000439476 TSPY10P0CW01 314 aa8.33□□□□□ -1.08
BDNF-211ENST00000439476 WDR43Q15061 677 aaKnown RBP eCLIP8.33□□□□□ -1.08
BDNF-211ENST00000439476 LAS1LQ9Y4W2 734 aaKnown RBP8.31□□□□□ -1.08
BDNF-211ENST00000439476 BECN1Q14457 450 aa8.31□□□□□ -1.08
BDNF-211ENST00000439476 ESF1Q9H501 851 aaKnown RBP8.31□□□□□ -1.08
BDNF-211ENST00000439476 PPM1GO15355 546 aaPredicted RBP8.3□□□□□ -1.08
BDNF-211ENST00000439476 HSP90AA2PQ14568 343 aaPredicted RBP8.3□□□□□ -1.08
BDNF-211ENST00000439476 CDCA8Q53HL2 280 aa8.3□□□□□ -1.08
BDNF-211ENST00000439476 FANCIQ9NVI1 1328 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms