RNA–Protein interactions for RNA: ENST00000439214.1

SNAP29-202, Transcript of synaptosome associated protein 29, humanhuman

TSL 3

Gene SNAP29, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-202ENST00000439214 FXR2P51116 673 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNAP29-202ENST00000439214 NPM1P06748 294 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNAP29-202ENST00000439214 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
SNAP29-202ENST00000439214 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
SNAP29-202ENST00000439214 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
SNAP29-202ENST00000439214 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
SNAP29-202ENST00000439214 NUBP1P53384 320 aa11.74□□□□□ -0.53
SNAP29-202ENST00000439214 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
SNAP29-202ENST00000439214 SP7Q8TDD2 431 aaPredicted RBP11.71□□□□□ -0.53
SNAP29-202ENST00000439214 HAX1O00165 279 aa11.69□□□□□ -0.54
SNAP29-202ENST00000439214 RIOK3O14730 519 aaKnown RBP11.66□□□□□ -0.54
SNAP29-202ENST00000439214 BCANQ96GW7 911 aa11.66□□□□□ -0.54
SNAP29-202ENST00000439214 PRKAR2AP13861 404 aaKnown RBP11.63□□□□□ -0.55
SNAP29-202ENST00000439214 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
SNAP29-202ENST00000439214 STK25O00506 426 aa11.6□□□□□ -0.55
SNAP29-202ENST00000439214 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
SNAP29-202ENST00000439214 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
SNAP29-202ENST00000439214 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
SNAP29-202ENST00000439214 EVX2Q03828 476 aa11.59□□□□□ -0.55
SNAP29-202ENST00000439214 PYGBP11216 843 aa11.58□□□□□ -0.56
SNAP29-202ENST00000439214 RNF25Q96BH1 459 aaPredicted RBP11.57□□□□□ -0.56
SNAP29-202ENST00000439214 TSHZ2Q9NRE2 1034 aa11.57□□□□□ -0.56
SNAP29-202ENST00000439214 CHRM1P11229 460 aaPredicted RBP11.55□□□□□ -0.56
SNAP29-202ENST00000439214 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
SNAP29-202ENST00000439214 TSPYL2Q9H2G4 693 aaPredicted RBP11.55□□□□□ -0.56
SNAP29-202ENST00000439214 KDM2AQ9Y2K7 1162 aa11.53□□□□□ -0.56
SNAP29-202ENST00000439214 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
SNAP29-202ENST00000439214 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
SNAP29-202ENST00000439214 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
SNAP29-202ENST00000439214 RYDENQ9NUL5 291 aaKnown RBP11.47□□□□□ -0.57
SNAP29-202ENST00000439214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.46□□□□□ -0.57
SNAP29-202ENST00000439214 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
SNAP29-202ENST00000439214 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
SNAP29-202ENST00000439214 ZFP91Q96JP5 570 aaPredicted RBP11.46□□□□□ -0.57
SNAP29-202ENST00000439214 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
SNAP29-202ENST00000439214 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
SNAP29-202ENST00000439214 SGIP1Q9BQI5 828 aa11.41□□□□□ -0.58
SNAP29-202ENST00000439214 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
SNAP29-202ENST00000439214 GTPBP6O43824 516 aaPredicted RBP11.39□□□□□ -0.59
SNAP29-202ENST00000439214 NBR1Q14596 966 aa11.39□□□□□ -0.59
SNAP29-202ENST00000439214 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
SNAP29-202ENST00000439214 PCDHB8Q9UN66 801 aa11.33□□□□□ -0.6
SNAP29-202ENST00000439214 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
SNAP29-202ENST00000439214 GABBR2O75899 941 aa11.29□□□□□ -0.6
SNAP29-202ENST00000439214 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
SNAP29-202ENST00000439214 PSEN1P49768 467 aa11.29□□□□□ -0.6
SNAP29-202ENST00000439214 TPRNQ4KMQ1 711 aa11.28□□□□□ -0.6
SNAP29-202ENST00000439214 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
SNAP29-202ENST00000439214 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.61
SNAP29-202ENST00000439214 CD44P16070 742 aaKnown RBP11.26□□□□□ -0.61
SNAP29-202ENST00000439214 WDR70Q9NW82 654 aa11.25□□□□□ -0.61
SNAP29-202ENST00000439214 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
SNAP29-202ENST00000439214 MAP3K13O43283 966 aa11.19□□□□□ -0.62
SNAP29-202ENST00000439214 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
SNAP29-202ENST00000439214 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
SNAP29-202ENST00000439214 GOLGA2Q08379 1002 aa11.16□□□□□ -0.62
SNAP29-202ENST00000439214 KIF12Q96FN5 646 aa11.16□□□□□ -0.62
SNAP29-202ENST00000439214 NLRP6P59044 892 aa11.13□□□□□ -0.63
SNAP29-202ENST00000439214 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
SNAP29-202ENST00000439214 EFCAB3Q8N7B9 438 aa11.12□□□□□ -0.63
SNAP29-202ENST00000439214 SOX12O15370 315 aa11.1□□□□□ -0.63
SNAP29-202ENST00000439214 MFRPQ9BY79 579 aa11.1□□□□□ -0.63
SNAP29-202ENST00000439214 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
SNAP29-202ENST00000439214 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
SNAP29-202ENST00000439214 CLCN6P51797 869 aa11.06□□□□□ -0.64
SNAP29-202ENST00000439214 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
SNAP29-202ENST00000439214 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
SNAP29-202ENST00000439214 CADPS2Q86UW7 1296 aa11.03□□□□□ -0.64
SNAP29-202ENST00000439214 TMEM106CQ9BVX2 250 aa11.03□□□□□ -0.64
SNAP29-202ENST00000439214 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
SNAP29-202ENST00000439214 PPP1R37O75864 691 aa10.99□□□□□ -0.65
SNAP29-202ENST00000439214 LHX8Q68G74 356 aa10.99□□□□□ -0.65
SNAP29-202ENST00000439214 FBXO22Q8NEZ5 403 aa10.97□□□□□ -0.65
SNAP29-202ENST00000439214 DCBLD2Q96PD2 775 aa10.97□□□□□ -0.65
SNAP29-202ENST00000439214 GALR2O43603 387 aaPredicted RBP10.96□□□□□ -0.65
SNAP29-202ENST00000439214 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
SNAP29-202ENST00000439214 PDE4AP27815 886 aa10.94□□□□□ -0.66
SNAP29-202ENST00000439214 KCNV2Q8TDN2 545 aa10.94□□□□□ -0.66
SNAP29-202ENST00000439214 E2F4Q16254 413 aa10.93□□□□□ -0.66
SNAP29-202ENST00000439214 LARP6Q9BRS8 491 aaKnown RBP10.92□□□□□ -0.66
SNAP29-202ENST00000439214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNAP29-202ENST00000439214 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
SNAP29-202ENST00000439214 TIE1P35590 1138 aa10.87□□□□□ -0.67
SNAP29-202ENST00000439214 ARHGEF1Q92888 912 aaKnown RBP10.87□□□□□ -0.67
SNAP29-202ENST00000439214 TRPC6Q9Y210 931 aa10.87□□□□□ -0.67
SNAP29-202ENST00000439214 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
SNAP29-202ENST00000439214 TTLL13PA6NNM8 815 aa10.83□□□□□ -0.68
SNAP29-202ENST00000439214 LMOD2Q6P5Q4 547 aa10.83□□□□□ -0.68
SNAP29-202ENST00000439214 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
SNAP29-202ENST00000439214 G3V3G9 751 aa10.82□□□□□ -0.68
SNAP29-202ENST00000439214 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
SNAP29-202ENST00000439214 SMYD5Q6GMV2 418 aa10.8□□□□□ -0.68
SNAP29-202ENST00000439214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.8□□□□□ -0.68
SNAP29-202ENST00000439214 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
SNAP29-202ENST00000439214 NCKAP5LQ9HCH0 1330 aa10.79□□□□□ -0.68
SNAP29-202ENST00000439214 PELP1Q8IZL8 1130 aaKnown RBP10.78□□□□□ -0.68
SNAP29-202ENST00000439214 SEMA3EO15041 775 aa10.75□□□□□ -0.69
SNAP29-202ENST00000439214 CRISPLD2Q9H0B8 497 aa10.74□□□□□ -0.69
SNAP29-202ENST00000439214 MFSD10Q14728 455 aa10.73□□□□□ -0.69
SNAP29-202ENST00000439214 TMC2Q8TDI7 906 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms