RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 EIF4G1Q04637 1599 aaKnown RBP8.28□□□□□ -1.08
LINC00415-201ENST00000439079 ECM2O94769 699 aaPredicted RBP8.28□□□□□ -1.08
LINC00415-201ENST00000439079 TMEM132AQ24JP5 1023 aa8.27□□□□□ -1.09
LINC00415-201ENST00000439079 PLEKHG5O94827 1062 aa8.25□□□□□ -1.09
LINC00415-201ENST00000439079 ZBTB47Q9UFB7 747 aaPredicted RBP8.25□□□□□ -1.09
LINC00415-201ENST00000439079 KDM2AQ9Y2K7 1162 aa8.25□□□□□ -1.09
LINC00415-201ENST00000439079 SHROOM4Q9ULL8 1493 aa8.25□□□□□ -1.09
LINC00415-201ENST00000439079 CACNB1Q02641 598 aaPredicted RBP8.24□□□□□ -1.09
LINC00415-201ENST00000439079 BBXQ8WY36 941 aaPredicted RBP8.22□□□□□ -1.09
LINC00415-201ENST00000439079 C14orf37Q86TY3 774 aa8.21□□□□□ -1.1
LINC00415-201ENST00000439079 RGL2O15211 777 aa8.18□□□□□ -1.1
LINC00415-201ENST00000439079 NBR1Q14596 966 aa8.18□□□□□ -1.1
LINC00415-201ENST00000439079 NPM1P06748 294 aaKnown RBP eCLIP8.17□□□□□ -1.1
LINC00415-201ENST00000439079 PODXL2Q9NZ53 605 aa8.16□□□□□ -1.1
LINC00415-201ENST00000439079 CIZ1Q9ULV3 898 aaPredicted RBP8.16□□□□□ -1.1
LINC00415-201ENST00000439079 SCRIBQ14160 1630 aa8.14□□□□□ -1.11
LINC00415-201ENST00000439079 TRIM41Q8WV44 630 aa8.14□□□□□ -1.11
LINC00415-201ENST00000439079 PAXIP1Q6ZW49 1069 aaPredicted RBP8.13□□□□□ -1.11
LINC00415-201ENST00000439079 TTBK1Q5TCY1 1321 aaPredicted RBP8.11□□□□□ -1.11
LINC00415-201ENST00000439079 CUX2O14529 1486 aa8.11□□□□□ -1.11
LINC00415-201ENST00000439079 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
LINC00415-201ENST00000439079 GSE1Q14687 1217 aa8.09□□□□□ -1.11
LINC00415-201ENST00000439079 SPRYD3Q8NCJ5 442 aa8.09□□□□□ -1.11
LINC00415-201ENST00000439079 SPDYE1Q8NFV5 336 aaPredicted RBP8.09□□□□□ -1.11
LINC00415-201ENST00000439079 RBM42Q9BTD8 480 aaKnown RBP8.09□□□□□ -1.11
LINC00415-201ENST00000439079 MYT1Q01538 1121 aa8.08□□□□□ -1.12
LINC00415-201ENST00000439079 PELP1Q8IZL8 1130 aaKnown RBP8.08□□□□□ -1.12
LINC00415-201ENST00000439079 AKT1S1Q96B36 256 aa8.08□□□□□ -1.12
LINC00415-201ENST00000439079 CHGAP10645 457 aaKnown RBP8.07□□□□□ -1.12
LINC00415-201ENST00000439079 DCAF1Q9Y4B6 1507 aa8.07□□□□□ -1.12
LINC00415-201ENST00000439079 ZCCHC6Q5VYS8 1495 aaKnown RBP8.06□□□□□ -1.12
LINC00415-201ENST00000439079 NUBP1P53384 320 aa8.04□□□□□ -1.12
LINC00415-201ENST00000439079 PRR29P0C7W0 189 aa8.02□□□□□ -1.13
LINC00415-201ENST00000439079 HS6ST3Q8IZP7 471 aa8.02□□□□□ -1.13
LINC00415-201ENST00000439079 DCAF8Q5TAQ9 597 aa8.01□□□□□ -1.13
LINC00415-201ENST00000439079 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
LINC00415-201ENST00000439079 CLEC11AQ9Y240 323 aa8.01□□□□□ -1.13
LINC00415-201ENST00000439079 CREBZFQ9NS37 354 aa8□□□□□ -1.13
LINC00415-201ENST00000439079 REM2Q8IYK8 340 aaPredicted RBP7.99□□□□□ -1.13
LINC00415-201ENST00000439079 RNF25Q96BH1 459 aaPredicted RBP7.99□□□□□ -1.13
LINC00415-201ENST00000439079 TSHZ2Q9NRE2 1034 aa7.99□□□□□ -1.13
LINC00415-201ENST00000439079 FAM212AQ96EL1 285 aa7.98□□□□□ -1.13
LINC00415-201ENST00000439079 RIOK3O14730 519 aaKnown RBP7.97□□□□□ -1.13
LINC00415-201ENST00000439079 MNX1P50219 401 aaPredicted RBP7.97□□□□□ -1.13
LINC00415-201ENST00000439079 ERCC6Q03468 1493 aa7.97□□□□□ -1.13
LINC00415-201ENST00000439079 CHRM1P11229 460 aaPredicted RBP7.94□□□□□ -1.14
LINC00415-201ENST00000439079 THOC2Q8NI27 1593 aaKnown RBP7.93□□□□□ -1.14
LINC00415-201ENST00000439079 NESP48681 1621 aa7.92□□□□□ -1.14
LINC00415-201ENST00000439079 VGFO15240 615 aaPredicted RBP7.91□□□□□ -1.14
LINC00415-201ENST00000439079 RASEFQ8IZ41 740 aa7.9□□□□□ -1.14
LINC00415-201ENST00000439079 SGIP1Q9BQI5 828 aa7.89□□□□□ -1.15
LINC00415-201ENST00000439079 NCAPD3P42695 1498 aa7.88□□□□□ -1.15
LINC00415-201ENST00000439079 STK25O00506 426 aa7.88□□□□□ -1.15
LINC00415-201ENST00000439079 PITPNM1O00562 1244 aa7.88□□□□□ -1.15
LINC00415-201ENST00000439079 NKX1-1Q15270 411 aaPredicted RBP7.88□□□□□ -1.15
LINC00415-201ENST00000439079 GTPBP6O43824 516 aaPredicted RBP7.86□□□□□ -1.15
LINC00415-201ENST00000439079 SUPT5HO00267 1087 aaKnown RBP7.85□□□□□ -1.15
LINC00415-201ENST00000439079 KIF21AQ7Z4S6 1674 aa7.84□□□□□ -1.15
LINC00415-201ENST00000439079 PYGBP11216 843 aa7.83□□□□□ -1.16
LINC00415-201ENST00000439079 RYDENQ9NUL5 291 aaKnown RBP7.83□□□□□ -1.16
LINC00415-201ENST00000439079 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.82□□□□□ -1.16
LINC00415-201ENST00000439079 ZFP91Q96JP5 570 aaPredicted RBP7.82□□□□□ -1.16
LINC00415-201ENST00000439079 BCL11BQ9C0K0 894 aaPredicted RBP7.82□□□□□ -1.16
LINC00415-201ENST00000439079 STK24Q9Y6E0 443 aa7.82□□□□□ -1.16
LINC00415-201ENST00000439079 ATAD2BQ9ULI0 1458 aa7.81□□□□□ -1.16
LINC00415-201ENST00000439079 TRIM26Q12899 539 aaPredicted RBP7.81□□□□□ -1.16
LINC00415-201ENST00000439079 SMARCA2P51531 1590 aa7.8□□□□□ -1.16
LINC00415-201ENST00000439079 HMGXB3Q12766 1538 aa7.79□□□□□ -1.16
LINC00415-201ENST00000439079 CHADLQ6NUI6 762 aa7.76□□□□□ -1.17
LINC00415-201ENST00000439079 ZNF467Q7Z7K2 595 aaPredicted RBP7.76□□□□□ -1.17
LINC00415-201ENST00000439079 FARP1Q9Y4F1 1045 aaPredicted RBP7.76□□□□□ -1.17
LINC00415-201ENST00000439079 LAMC3Q9Y6N6 1575 aa7.76□□□□□ -1.17
LINC00415-201ENST00000439079 TSPYL2Q9H2G4 693 aaPredicted RBP7.75□□□□□ -1.17
LINC00415-201ENST00000439079 BAZ1AQ9NRL2 1556 aaPredicted RBP7.75□□□□□ -1.17
LINC00415-201ENST00000439079 SMARCA4P51532 1647 aa7.74□□□□□ -1.17
LINC00415-201ENST00000439079 UBTFP17480 764 aaKnown RBP7.74□□□□□ -1.17
LINC00415-201ENST00000439079 CCDC9Q9Y3X0 531 aaKnown RBP7.73□□□□□ -1.17
LINC00415-201ENST00000439079 PDAP1Q13442 181 aaKnown RBP7.72□□□□□ -1.17
LINC00415-201ENST00000439079 RIMBP3CA6NJZ7 1639 aa7.7□□□□□ -1.18
LINC00415-201ENST00000439079 RIMBP3BA6NNM3 1639 aa7.7□□□□□ -1.18
LINC00415-201ENST00000439079 RIMBP3Q9UFD9 1639 aa7.7□□□□□ -1.18
LINC00415-201ENST00000439079 PRKAR2AP13861 404 aaKnown RBP7.69□□□□□ -1.18
LINC00415-201ENST00000439079 HRCP23327 699 aa7.69□□□□□ -1.18
LINC00415-201ENST00000439079 BAZ1BQ9UIG0 1483 aaKnown RBP7.68□□□□□ -1.18
LINC00415-201ENST00000439079 WDR62O43379 1518 aa7.68□□□□□ -1.18
LINC00415-201ENST00000439079 ZNF579Q8NAF0 562 aaKnown RBP7.68□□□□□ -1.18
LINC00415-201ENST00000439079 PCDHB8Q9UN66 801 aa7.68□□□□□ -1.18
LINC00415-201ENST00000439079 PCDHB13Q9Y5F0 798 aa7.68□□□□□ -1.18
LINC00415-201ENST00000439079 CCDC61Q9Y6R9 512 aa7.68□□□□□ -1.18
LINC00415-201ENST00000439079 PEG3Q9GZU2 1588 aa7.67□□□□□ -1.18
LINC00415-201ENST00000439079 ZBTB7CA1YPR0 619 aa7.67□□□□□ -1.18
LINC00415-201ENST00000439079 FXR2P51116 673 aaKnown RBP eCLIP7.67□□□□□ -1.18
LINC00415-201ENST00000439079 BRPF1P55201 1214 aaPredicted RBP7.67□□□□□ -1.18
LINC00415-201ENST00000439079 P3H3Q8IVL6 736 aa7.67□□□□□ -1.18
LINC00415-201ENST00000439079 PSEN1P49768 467 aa7.66□□□□□ -1.18
LINC00415-201ENST00000439079 RSPH6AQ9H0K4 717 aa7.66□□□□□ -1.18
LINC00415-201ENST00000439079 PDS5BQ9NTI5 1447 aa7.66□□□□□ -1.18
LINC00415-201ENST00000439079 MRC2Q9UBG0 1479 aa7.66□□□□□ -1.18
LINC00415-201ENST00000439079 PAK3O75914 559 aaPredicted RBP7.65□□□□□ -1.18
LINC00415-201ENST00000439079 ZMYND15Q9H091 742 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms