RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CREBZFQ9NS37 354 aa10.68□□□□□ -0.7
TRAPPC13-204ENST00000438419 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
TRAPPC13-204ENST00000438419 MIER1Q8N108 512 aa10.65□□□□□ -0.7
TRAPPC13-204ENST00000438419 METRNQ9UJH8 293 aa10.65□□□□□ -0.7
TRAPPC13-204ENST00000438419 PAK3O75914 559 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC13-204ENST00000438419 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
TRAPPC13-204ENST00000438419 POTEJP0CG39 1038 aa10.59□□□□□ -0.71
TRAPPC13-204ENST00000438419 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC13-204ENST00000438419 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC13-204ENST00000438419 SLC39A7Q92504 469 aa10.59□□□□□ -0.71
TRAPPC13-204ENST00000438419 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
TRAPPC13-204ENST00000438419 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
TRAPPC13-204ENST00000438419 C7P10643 843 aa10.58□□□□□ -0.72
TRAPPC13-204ENST00000438419 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
TRAPPC13-204ENST00000438419 PLEKHG5O94827 1062 aa10.52□□□□□ -0.73
TRAPPC13-204ENST00000438419 ASTLQ6HA08 431 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC13-204ENST00000438419 ATMINO43313 823 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC13-204ENST00000438419 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
TRAPPC13-204ENST00000438419 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC13-204ENST00000438419 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAPPC13-204ENST00000438419 NUBP1P53384 320 aa10.43□□□□□ -0.74
TRAPPC13-204ENST00000438419 SPOCK2Q92563 424 aa10.42□□□□□ -0.74
TRAPPC13-204ENST00000438419 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
TRAPPC13-204ENST00000438419 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
TRAPPC13-204ENST00000438419 MMRN1Q13201 1228 aa10.38□□□□□ -0.75
TRAPPC13-204ENST00000438419 ATN1P54259 1190 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC13-204ENST00000438419 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
TRAPPC13-204ENST00000438419 TSPYL2Q9H2G4 693 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC13-204ENST00000438419 DCAF8Q5TAQ9 597 aa10.28□□□□□ -0.76
TRAPPC13-204ENST00000438419 POTEFA5A3E0 1075 aa10.27□□□□□ -0.77
TRAPPC13-204ENST00000438419 FAM212AQ96EL1 285 aa10.27□□□□□ -0.77
TRAPPC13-204ENST00000438419 ST18O60284 1047 aa10.25□□□□□ -0.77
TRAPPC13-204ENST00000438419 CIZ1Q9ULV3 898 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC13-204ENST00000438419 GSE1Q14687 1217 aa10.24□□□□□ -0.77
TRAPPC13-204ENST00000438419 CCDC61Q9Y6R9 512 aa10.24□□□□□ -0.77
TRAPPC13-204ENST00000438419 PKD2Q13563 968 aa10.24□□□□□ -0.77
TRAPPC13-204ENST00000438419 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
TRAPPC13-204ENST00000438419 SEC24BO95487 1268 aa10.22□□□□□ -0.77
TRAPPC13-204ENST00000438419 AMER1Q5JTC6 1135 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC13-204ENST00000438419 BMP2KQ9NSY1 1161 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC13-204ENST00000438419 SLAIN1Q8ND83 568 aa10.17□□□□□ -0.78
TRAPPC13-204ENST00000438419 PYGBP11216 843 aa10.16□□□□□ -0.78
TRAPPC13-204ENST00000438419 CHRM1P11229 460 aaPredicted RBP10.15□□□□□ -0.79
TRAPPC13-204ENST00000438419 KIF12Q96FN5 646 aa10.15□□□□□ -0.79
TRAPPC13-204ENST00000438419 COLQQ9Y215 455 aaPredicted RBP10.15□□□□□ -0.79
TRAPPC13-204ENST00000438419 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC13-204ENST00000438419 TRIM41Q8WV44 630 aa10.13□□□□□ -0.79
TRAPPC13-204ENST00000438419 MAP3K13O43283 966 aa10.11□□□□□ -0.79
TRAPPC13-204ENST00000438419 TIE1P35590 1138 aa10.11□□□□□ -0.79
TRAPPC13-204ENST00000438419 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC13-204ENST00000438419 RNF25Q96BH1 459 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC13-204ENST00000438419 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
TRAPPC13-204ENST00000438419 RGL2O15211 777 aa10.07□□□□□ -0.8
TRAPPC13-204ENST00000438419 SGIP1Q9BQI5 828 aa10.06□□□□□ -0.8
TRAPPC13-204ENST00000438419 PCDHB13Q9Y5F0 798 aa10.06□□□□□ -0.8
TRAPPC13-204ENST00000438419 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
TRAPPC13-204ENST00000438419 PCDHB8Q9UN66 801 aa10.04□□□□□ -0.8
TRAPPC13-204ENST00000438419 TTLL13PA6NNM8 815 aa10.02□□□□□ -0.81
TRAPPC13-204ENST00000438419 IER5LQ5T953 404 aa10.02□□□□□ -0.81
TRAPPC13-204ENST00000438419 MARVELD3Q96A59 401 aa10.01□□□□□ -0.81
TRAPPC13-204ENST00000438419 RIOK3O14730 519 aaKnown RBP10□□□□□ -0.81
TRAPPC13-204ENST00000438419 SNPHO15079 494 aa10□□□□□ -0.81
TRAPPC13-204ENST00000438419 ZNF467Q7Z7K2 595 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC13-204ENST00000438419 TRIM35Q9UPQ4 493 aa9.98□□□□□ -0.81
TRAPPC13-204ENST00000438419 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC13-204ENST00000438419 PSEN1P49768 467 aa9.92□□□□□ -0.82
TRAPPC13-204ENST00000438419 PDAP1Q13442 181 aaKnown RBP9.92□□□□□ -0.82
TRAPPC13-204ENST00000438419 PLCG2P16885 1265 aa9.91□□□□□ -0.82
TRAPPC13-204ENST00000438419 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC13-204ENST00000438419 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC13-204ENST00000438419 EMP3P54852 163 aa9.9□□□□□ -0.83
TRAPPC13-204ENST00000438419 TMEM106CQ9BVX2 250 aa9.88□□□□□ -0.83
TRAPPC13-204ENST00000438419 DCAF8L2P0C7V8 631 aa9.87□□□□□ -0.83
TRAPPC13-204ENST00000438419 KRTAP3-3Q9BYR6 98 aa9.87□□□□□ -0.83
TRAPPC13-204ENST00000438419 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
TRAPPC13-204ENST00000438419 TAOK2Q9UL54 1235 aa9.86□□□□□ -0.83
TRAPPC13-204ENST00000438419 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.84□□□□□ -0.83
TRAPPC13-204ENST00000438419 STK25O00506 426 aa9.83□□□□□ -0.84
TRAPPC13-204ENST00000438419 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
TRAPPC13-204ENST00000438419 BCL11BQ9C0K0 894 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC13-204ENST00000438419 HS6ST3Q8IZP7 471 aa9.82□□□□□ -0.84
TRAPPC13-204ENST00000438419 HS3ST6Q96QI5 342 aa9.82□□□□□ -0.84
TRAPPC13-204ENST00000438419 STK24Q9Y6E0 443 aa9.81□□□□□ -0.84
TRAPPC13-204ENST00000438419 FAM205CA6NFA0 338 aa9.8□□□□□ -0.84
TRAPPC13-204ENST00000438419 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
TRAPPC13-204ENST00000438419 IRX5P78411 483 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC13-204ENST00000438419 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
TRAPPC13-204ENST00000438419 DNAJC5Q9H3Z4 198 aa9.76□□□□□ -0.85
TRAPPC13-204ENST00000438419 POTEB3A0JP26 581 aa9.75□□□□□ -0.85
TRAPPC13-204ENST00000438419 POTEBQ6S5H4 581 aa9.75□□□□□ -0.85
TRAPPC13-204ENST00000438419 NKX1-1Q15270 411 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC13-204ENST00000438419 RNF166Q96A37 237 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC13-204ENST00000438419 OCEL1Q9H607 264 aa9.73□□□□□ -0.85
TRAPPC13-204ENST00000438419 GOLGA2Q08379 1002 aa9.71□□□□□ -0.86
TRAPPC13-204ENST00000438419 MKRN3Q13064 507 aaKnown RBP9.71□□□□□ -0.86
TRAPPC13-204ENST00000438419 BBXQ8WY36 941 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC13-204ENST00000438419 SOX12O15370 315 aa9.69□□□□□ -0.86
TRAPPC13-204ENST00000438419 ILDR1Q86SU0 546 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC13-204ENST00000438419 MFRPQ9BY79 579 aa9.69□□□□□ -0.86
TRAPPC13-204ENST00000438419 PHF8Q9UPP1 1060 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms