RNA–Protein interactions for RNA: ENST00000438169.6

KRR1-202, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 1 (best) BASIC

Gene KRR1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-202ENST00000438169 PCDH10Q9P2E7 1040 aa13□□□□□ -0.33
KRR1-202ENST00000438169 SLC39A7Q92504 469 aa12.96□□□□□ -0.33
KRR1-202ENST00000438169 C7P10643 843 aa12.95□□□□□ -0.34
KRR1-202ENST00000438169 NPM1P06748 294 aaKnown RBP eCLIP12.92□□□□□ -0.34
KRR1-202ENST00000438169 POTEFA5A3E0 1075 aa12.91□□□□□ -0.34
KRR1-202ENST00000438169 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
KRR1-202ENST00000438169 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
KRR1-202ENST00000438169 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
KRR1-202ENST00000438169 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
KRR1-202ENST00000438169 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
KRR1-202ENST00000438169 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
KRR1-202ENST00000438169 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
KRR1-202ENST00000438169 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
KRR1-202ENST00000438169 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
KRR1-202ENST00000438169 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
KRR1-202ENST00000438169 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
KRR1-202ENST00000438169 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
KRR1-202ENST00000438169 CDAN1Q8IWY9 1227 aa12.68□□□□□ -0.38
KRR1-202ENST00000438169 MAP3K13O43283 966 aa12.65□□□□□ -0.38
KRR1-202ENST00000438169 TIE1P35590 1138 aa12.62□□□□□ -0.39
KRR1-202ENST00000438169 TTLL13PA6NNM8 815 aa12.6□□□□□ -0.39
KRR1-202ENST00000438169 PROM2Q8N271 834 aa12.58□□□□□ -0.4
KRR1-202ENST00000438169 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
KRR1-202ENST00000438169 ST18O60284 1047 aa12.54□□□□□ -0.4
KRR1-202ENST00000438169 SEC24BO95487 1268 aa12.52□□□□□ -0.41
KRR1-202ENST00000438169 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
KRR1-202ENST00000438169 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
KRR1-202ENST00000438169 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
KRR1-202ENST00000438169 IER5LQ5T953 404 aa12.44□□□□□ -0.42
KRR1-202ENST00000438169 SPNS2Q8IVW8 549 aa12.41□□□□□ -0.42
KRR1-202ENST00000438169 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
KRR1-202ENST00000438169 IFNL1Q8IU54 200 aa12.36□□□□□ -0.43
KRR1-202ENST00000438169 MIER1Q8N108 512 aa12.36□□□□□ -0.43
KRR1-202ENST00000438169 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
KRR1-202ENST00000438169 IRX5P78411 483 aaPredicted RBP12.32□□□□□ -0.44
KRR1-202ENST00000438169 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
KRR1-202ENST00000438169 NUBP1P53384 320 aa12.29□□□□□ -0.44
KRR1-202ENST00000438169 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
KRR1-202ENST00000438169 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
KRR1-202ENST00000438169 PLCG2P16885 1265 aa12.27□□□□□ -0.45
KRR1-202ENST00000438169 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
KRR1-202ENST00000438169 TMEM121BQ9BXQ6 578 aaPredicted RBP12.24□□□□□ -0.45
KRR1-202ENST00000438169 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
KRR1-202ENST00000438169 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
KRR1-202ENST00000438169 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
KRR1-202ENST00000438169 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
KRR1-202ENST00000438169 KRTAP3-3Q9BYR6 98 aa12.14□□□□□ -0.47
KRR1-202ENST00000438169 KRTAP3-2Q9BYR7 98 aa12.14□□□□□ -0.47
KRR1-202ENST00000438169 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.12□□□□□ -0.47
KRR1-202ENST00000438169 SNPHO15079 494 aa12.11□□□□□ -0.47
KRR1-202ENST00000438169 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
KRR1-202ENST00000438169 PDCD7Q8N8D1 485 aaKnown RBP12.06□□□□□ -0.48
KRR1-202ENST00000438169 EMP3P54852 163 aa12.05□□□□□ -0.48
KRR1-202ENST00000438169 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
KRR1-202ENST00000438169 PCDHB8Q9UN66 801 aa12.05□□□□□ -0.48
KRR1-202ENST00000438169 PYGBP11216 843 aa12.04□□□□□ -0.48
KRR1-202ENST00000438169 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
KRR1-202ENST00000438169 FAM205CA6NFA0 338 aa12□□□□□ -0.49
KRR1-202ENST00000438169 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
KRR1-202ENST00000438169 C3orf67Q6ZVT6 689 aa11.93□□□□□ -0.5
KRR1-202ENST00000438169 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
KRR1-202ENST00000438169 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
KRR1-202ENST00000438169 DPY19L2Q6NUT2 758 aa11.84□□□□□ -0.51
KRR1-202ENST00000438169 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
KRR1-202ENST00000438169 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
KRR1-202ENST00000438169 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.523e-6■■■□□ 14.7
KRR1-202ENST00000438169 GOLGA2Q08379 1002 aa11.76□□□□□ -0.53
KRR1-202ENST00000438169 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
KRR1-202ENST00000438169 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
KRR1-202ENST00000438169 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
KRR1-202ENST00000438169 PSEN1P49768 467 aa11.73□□□□□ -0.53
KRR1-202ENST00000438169 ERBB3P21860 1342 aa11.68□□□□□ -0.54
KRR1-202ENST00000438169 BOLA1Q9Y3E2 137 aa11.67□□□□□ -0.54
KRR1-202ENST00000438169 CHRM1P11229 460 aaPredicted RBP11.66□□□□□ -0.54
KRR1-202ENST00000438169 FKBP8Q14318 412 aa11.66□□□□□ -0.54
KRR1-202ENST00000438169 VARS2Q5ST30 1063 aaKnown RBP11.64□□□□□ -0.55
KRR1-202ENST00000438169 MYT1LQ9UL68 1186 aa11.64□□□□□ -0.55
KRR1-202ENST00000438169 GSE1Q14687 1217 aa11.63□□□□□ -0.55
KRR1-202ENST00000438169 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
KRR1-202ENST00000438169 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
KRR1-202ENST00000438169 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
KRR1-202ENST00000438169 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
KRR1-202ENST00000438169 TMEM92Q6UXU6 159 aa11.56□□□□□ -0.56
KRR1-202ENST00000438169 ZNF687Q8N1G0 1237 aa11.55□□□□□ -0.56
KRR1-202ENST00000438169 G3V3G9 751 aa11.52□□□□□ -0.57
KRR1-202ENST00000438169 KLHL34Q8N239 644 aa11.52□□□□□ -0.57
KRR1-202ENST00000438169 GPR153Q6NV75 609 aa11.51□□□□□ -0.57
KRR1-202ENST00000438169 VASPP50552 380 aaPredicted RBP11.48□□□□□ -0.57
KRR1-202ENST00000438169 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
KRR1-202ENST00000438169 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
KRR1-202ENST00000438169 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
KRR1-202ENST00000438169 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
KRR1-202ENST00000438169 MICALL2Q8IY33 904 aa11.42□□□□□ -0.58
KRR1-202ENST00000438169 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
KRR1-202ENST00000438169 PTGER2P43116 358 aa11.4□□□□□ -0.58
KRR1-202ENST00000438169 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■■□□ 19
KRR1-202ENST00000438169 ARSIQ5FYB1 569 aa11.38□□□□□ -0.59
KRR1-202ENST00000438169 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
KRR1-202ENST00000438169 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.6
KRR1-202ENST00000438169 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms