RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
ARHGEF28-204ENST00000437974 RRP7BPQ9NSQ0 103 aa24.35■■□□□ 1.49
ARHGEF28-204ENST00000437974 MRS2Q9HD23 443 aa24.34■■□□□ 1.49
ARHGEF28-204ENST00000437974 CLIP1P30622 1438 aa24.34■■□□□ 1.49
ARHGEF28-204ENST00000437974 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
ARHGEF28-204ENST00000437974 HAP1P54257 671 aaPredicted RBP24.33■■□□□ 1.49
ARHGEF28-204ENST00000437974 HIRIP3Q9BW71 556 aaPredicted RBP24.33■■□□□ 1.49
ARHGEF28-204ENST00000437974 MYH16Q9H6N6 1097 aa24.33■■□□□ 1.49
ARHGEF28-204ENST00000437974 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
ARHGEF28-204ENST00000437974 CCDC136Q96JN2 1154 aa24.3■■□□□ 1.48
ARHGEF28-204ENST00000437974 EIF4G2P78344 907 aaKnown RBP eCLIP24.25■■□□□ 1.47
ARHGEF28-204ENST00000437974 IRX6P78412 446 aaPredicted RBP24.24■■□□□ 1.47
ARHGEF28-204ENST00000437974 RGL3Q3MIN7 710 aa24.22■■□□□ 1.47
ARHGEF28-204ENST00000437974 CFDP1Q9UEE9 299 aaPredicted RBP24.2■■□□□ 1.46
ARHGEF28-204ENST00000437974 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
ARHGEF28-204ENST00000437974 NBR1Q14596 966 aa24.18■■□□□ 1.46
ARHGEF28-204ENST00000437974 GOLGA3Q08378 1498 aa24.17■■□□□ 1.46
ARHGEF28-204ENST00000437974 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
ARHGEF28-204ENST00000437974 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
ARHGEF28-204ENST00000437974 CDCA8Q53HL2 280 aa24.14■■□□□ 1.45
ARHGEF28-204ENST00000437974 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
ARHGEF28-204ENST00000437974 EIF5BO60841 1220 aaKnown RBP24.1■■□□□ 1.45
ARHGEF28-204ENST00000437974 ARXQ96QS3 562 aa24.1■■□□□ 1.45
ARHGEF28-204ENST00000437974 EEA1Q15075 1411 aa24.09■■□□□ 1.45
ARHGEF28-204ENST00000437974 PPM1GO15355 546 aaPredicted RBP24.07■■□□□ 1.44
ARHGEF28-204ENST00000437974 CDK11BP21127 795 aaKnown RBP24.06■■□□□ 1.44
ARHGEF28-204ENST00000437974 KNSTRNQ9Y448 316 aa24.05■■□□□ 1.44
ARHGEF28-204ENST00000437974 KIF27Q86VH2 1401 aa24.04■■□□□ 1.44
ARHGEF28-204ENST00000437974 LMOD2Q6P5Q4 547 aa24.04■■□□□ 1.44
ARHGEF28-204ENST00000437974 POGKQ9P215 609 aa24.02■■□□□ 1.44
ARHGEF28-204ENST00000437974 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
ARHGEF28-204ENST00000437974 CARD11Q9BXL7 1154 aa23.98■■□□□ 1.43
ARHGEF28-204ENST00000437974 TRHP20396 242 aaPredicted RBP23.97■■□□□ 1.43
ARHGEF28-204ENST00000437974 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
ARHGEF28-204ENST00000437974 MAPK8IP3Q9UPT6 1336 aa23.92■■□□□ 1.42
ARHGEF28-204ENST00000437974 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
ARHGEF28-204ENST00000437974 NACADO15069 1562 aa23.92■■□□□ 1.42
ARHGEF28-204ENST00000437974 SENP3-EIF4A1A0A087X0R7 540 aa23.92■■□□□ 1.42
ARHGEF28-204ENST00000437974 NPHP1O15259 732 aa23.89■■□□□ 1.41
ARHGEF28-204ENST00000437974 NCLP19338 710 aaKnown RBP23.89■■□□□ 1.41
ARHGEF28-204ENST00000437974 LAS1LQ9Y4W2 734 aaKnown RBP23.87■■□□□ 1.41
ARHGEF28-204ENST00000437974 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
ARHGEF28-204ENST00000437974 FTSJ3Q8IY81 847 aaKnown RBP23.86■■□□□ 1.41
ARHGEF28-204ENST00000437974 BECN1Q14457 450 aa23.85■■□□□ 1.41
ARHGEF28-204ENST00000437974 HDGFP51858 240 aaKnown RBP23.85■■□□□ 1.41
ARHGEF28-204ENST00000437974 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
ARHGEF28-204ENST00000437974 CASC1Q6TDU7 716 aa23.84■■□□□ 1.41
ARHGEF28-204ENST00000437974 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.4
ARHGEF28-204ENST00000437974 KANK1Q14678 1352 aa23.82■■□□□ 1.4
ARHGEF28-204ENST00000437974 MLECQ14165 292 aa23.81■■□□□ 1.4
ARHGEF28-204ENST00000437974 SUPT16HQ9Y5B9 1047 aaKnown RBP23.81■■□□□ 1.4
ARHGEF28-204ENST00000437974 SIN3AQ96ST3 1273 aa23.8■■□□□ 1.4
ARHGEF28-204ENST00000437974 DDRGK1Q96HY6 314 aa23.77■■□□□ 1.4
ARHGEF28-204ENST00000437974 TNNT2P45379 298 aaPredicted RBP23.76■■□□□ 1.39
ARHGEF28-204ENST00000437974 GOLGA6L22H0YM25 854 aa23.76■■□□□ 1.39
ARHGEF28-204ENST00000437974 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
ARHGEF28-204ENST00000437974 ZRSR1Q15695 479 aaKnown RBP23.73■■□□□ 1.39
ARHGEF28-204ENST00000437974 PNNQ9H307 717 aaKnown RBP23.73■■□□□ 1.39
ARHGEF28-204ENST00000437974 U2SURPO15042 1029 aaKnown RBP23.72■■□□□ 1.39
ARHGEF28-204ENST00000437974 CHMP4BQ9H444 224 aaKnown RBP23.69■■□□□ 1.38
ARHGEF28-204ENST00000437974 OS9Q13438 667 aaPredicted RBP23.68■■□□□ 1.38
ARHGEF28-204ENST00000437974 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
ARHGEF28-204ENST00000437974 CC2D1BQ5T0F9 858 aaKnown RBP23.67■■□□□ 1.38
ARHGEF28-204ENST00000437974 TMF1P82094 1093 aa23.66■■□□□ 1.38
ARHGEF28-204ENST00000437974 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
ARHGEF28-204ENST00000437974 SRPK2P78362 688 aaKnown RBP23.65■■□□□ 1.38
ARHGEF28-204ENST00000437974 DCAF11Q8TEB1 546 aa23.65■■□□□ 1.38
ARHGEF28-204ENST00000437974 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.38
ARHGEF28-204ENST00000437974 FRAT1Q92837 279 aaPredicted RBP23.64■■□□□ 1.37
ARHGEF28-204ENST00000437974 GOLGA2Q08379 1002 aa23.63■■□□□ 1.37
ARHGEF28-204ENST00000437974 TULP1O00294 542 aaPredicted RBP23.62■■□□□ 1.37
ARHGEF28-204ENST00000437974 MS4A1P11836 297 aa23.62■■□□□ 1.37
ARHGEF28-204ENST00000437974 GLIPR1L2Q4G1C9 344 aa23.62■■□□□ 1.37
ARHGEF28-204ENST00000437974 SOX12O15370 315 aa23.61■■□□□ 1.37
ARHGEF28-204ENST00000437974 GGT6Q6P531 493 aa23.61■■□□□ 1.37
ARHGEF28-204ENST00000437974 BAZ1AQ9NRL2 1556 aaPredicted RBP23.61■■□□□ 1.37
ARHGEF28-204ENST00000437974 CUX2O14529 1486 aa23.61■■□□□ 1.37
ARHGEF28-204ENST00000437974 SOGA1O94964 1423 aa23.58■■□□□ 1.37
ARHGEF28-204ENST00000437974 PPP4R2Q9NY27 417 aa23.58■■□□□ 1.36
ARHGEF28-204ENST00000437974 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
ARHGEF28-204ENST00000437974 TRIM44Q96DX7 344 aaPredicted RBP23.57■■□□□ 1.36
ARHGEF28-204ENST00000437974 SAFB2Q14151 953 aaKnown RBP eCLIP23.56■■□□□ 1.36
ARHGEF28-204ENST00000437974 FGD1P98174 961 aa23.55■■□□□ 1.36
ARHGEF28-204ENST00000437974 TPRNQ4KMQ1 711 aa23.54■■□□□ 1.36
ARHGEF28-204ENST00000437974 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
ARHGEF28-204ENST00000437974 TAOK2Q9UL54 1235 aa23.53■■□□□ 1.36
ARHGEF28-204ENST00000437974 KCNJ4P48050 445 aa23.52■■□□□ 1.36
ARHGEF28-204ENST00000437974 MORC1Q86VD1 984 aa23.52■■□□□ 1.36
ARHGEF28-204ENST00000437974 STK26Q9P289 416 aa23.5■■□□□ 1.35
ARHGEF28-204ENST00000437974 PTMAP06454 111 aaKnown RBP23.49■■□□□ 1.35
ARHGEF28-204ENST00000437974 RTF1Q92541 710 aaKnown RBP23.48■■□□□ 1.35
ARHGEF28-204ENST00000437974 RGS3P49796 1198 aa23.48■■□□□ 1.35
ARHGEF28-204ENST00000437974 HDGFL2Q7Z4V5 671 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF28-204ENST00000437974 NAP1L2Q9ULW6 460 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF28-204ENST00000437974 B4GALNT3Q6L9W6 998 aa23.45■■□□□ 1.35
ARHGEF28-204ENST00000437974 PDS5BQ9NTI5 1447 aa23.44■■□□□ 1.34
ARHGEF28-204ENST00000437974 PAK3O75914 559 aaPredicted RBP23.44■■□□□ 1.34
ARHGEF28-204ENST00000437974 EFCAB2Q5VUJ9 269 aa23.42■■□□□ 1.34
ARHGEF28-204ENST00000437974 CSB-PGBD3P0DP91 1061 aa23.41■■□□□ 1.34
ARHGEF28-204ENST00000437974 PKD2Q13563 968 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms