RNA–Protein interactions for RNA: ENST00000437728.1

RPS3AP29-201, Transcript of ribosomal protein S3a pseudogene 29, humanhuman

BASIC

Gene RPS3AP29, Length 769 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP29-201ENST00000437728 ZNF579Q8NAF0 562 aaKnown RBP17.21■□□□□ 0.35
RPS3AP29-201ENST00000437728 GABBR2O75899 941 aa17.17■□□□□ 0.34
RPS3AP29-201ENST00000437728 PHF12Q96QT6 1004 aa17.16■□□□□ 0.34
RPS3AP29-201ENST00000437728 FAM212AQ96EL1 285 aa17.13■□□□□ 0.33
RPS3AP29-201ENST00000437728 SPOCK2Q92563 424 aa17.12■□□□□ 0.33
RPS3AP29-201ENST00000437728 CCDC61Q9Y6R9 512 aa17.12■□□□□ 0.33
RPS3AP29-201ENST00000437728 DCAF8Q5TAQ9 597 aa17.1■□□□□ 0.33
RPS3AP29-201ENST00000437728 CLCN6P51797 869 aa17.08■□□□□ 0.32
RPS3AP29-201ENST00000437728 GALR2O43603 387 aaPredicted RBP16.99■□□□□ 0.31
RPS3AP29-201ENST00000437728 GSE1Q14687 1217 aa16.99■□□□□ 0.31
RPS3AP29-201ENST00000437728 KIF12Q96FN5 646 aa16.98■□□□□ 0.31
RPS3AP29-201ENST00000437728 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
RPS3AP29-201ENST00000437728 MS4A3Q96HJ5 214 aa16.94■□□□□ 0.3
RPS3AP29-201ENST00000437728 MAP3K13O43283 966 aa16.93■□□□□ 0.3
RPS3AP29-201ENST00000437728 PYGBP11216 843 aa16.91■□□□□ 0.3
RPS3AP29-201ENST00000437728 DCBLD2Q96PD2 775 aa16.87■□□□□ 0.29
RPS3AP29-201ENST00000437728 PCDHB13Q9Y5F0 798 aa16.85■□□□□ 0.29
RPS3AP29-201ENST00000437728 SGIP1Q9BQI5 828 aa16.81■□□□□ 0.28
RPS3AP29-201ENST00000437728 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
RPS3AP29-201ENST00000437728 POTEIP0CG38 1075 aa16.79■□□□□ 0.28
RPS3AP29-201ENST00000437728 IFNL1Q8IU54 200 aa16.77■□□□□ 0.28
RPS3AP29-201ENST00000437728 TRPC6Q9Y210 931 aa16.76■□□□□ 0.27
RPS3AP29-201ENST00000437728 CHRM1P11229 460 aaPredicted RBP16.74■□□□□ 0.27
RPS3AP29-201ENST00000437728 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
RPS3AP29-201ENST00000437728 NACADO15069 1562 aa16.69■□□□□ 0.26
RPS3AP29-201ENST00000437728 TRIM41Q8WV44 630 aa16.69■□□□□ 0.26
RPS3AP29-201ENST00000437728 MYO15BQ96JP2 1530 aa16.68■□□□□ 0.26
RPS3AP29-201ENST00000437728 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
RPS3AP29-201ENST00000437728 TIE1P35590 1138 aa16.66■□□□□ 0.26
RPS3AP29-201ENST00000437728 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
RPS3AP29-201ENST00000437728 BMP2KQ9NSY1 1161 aaPredicted RBP16.66■□□□□ 0.26
RPS3AP29-201ENST00000437728 ATMINO43313 823 aaPredicted RBP16.65■□□□□ 0.26
RPS3AP29-201ENST00000437728 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
RPS3AP29-201ENST00000437728 ZNF467Q7Z7K2 595 aaPredicted RBP16.65■□□□□ 0.26
RPS3AP29-201ENST00000437728 ATN1P54259 1190 aaPredicted RBP16.6■□□□□ 0.25
RPS3AP29-201ENST00000437728 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
RPS3AP29-201ENST00000437728 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
RPS3AP29-201ENST00000437728 TMEM106CQ9BVX2 250 aa16.57■□□□□ 0.24
RPS3AP29-201ENST00000437728 PKD2Q13563 968 aa16.56■□□□□ 0.24
RPS3AP29-201ENST00000437728 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
RPS3AP29-201ENST00000437728 DCAF8L2P0C7V8 631 aa16.53■□□□□ 0.24
RPS3AP29-201ENST00000437728 PSEN1P49768 467 aa16.5■□□□□ 0.23
RPS3AP29-201ENST00000437728 TRIM35Q9UPQ4 493 aa16.5■□□□□ 0.23
RPS3AP29-201ENST00000437728 PDAP1Q13442 181 aaKnown RBP16.48■□□□□ 0.23
RPS3AP29-201ENST00000437728 SLC39A7Q92504 469 aa16.48■□□□□ 0.23
RPS3AP29-201ENST00000437728 RNF25Q96BH1 459 aaPredicted RBP16.48■□□□□ 0.23
RPS3AP29-201ENST00000437728 RIOK3O14730 519 aaKnown RBP16.46■□□□□ 0.23
RPS3AP29-201ENST00000437728 METRNQ9UJH8 293 aa16.45■□□□□ 0.22
RPS3AP29-201ENST00000437728 C7P10643 843 aa16.44■□□□□ 0.22
RPS3AP29-201ENST00000437728 RGL2O15211 777 aa16.38■□□□□ 0.21
RPS3AP29-201ENST00000437728 VGFO15240 615 aaPredicted RBP16.37■□□□□ 0.21
RPS3AP29-201ENST00000437728 LHX8Q68G74 356 aa16.37■□□□□ 0.21
RPS3AP29-201ENST00000437728 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
RPS3AP29-201ENST00000437728 IER5LQ5T953 404 aa16.34■□□□□ 0.21
RPS3AP29-201ENST00000437728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.33■□□□□ 0.2
RPS3AP29-201ENST00000437728 ZFP91Q96JP5 570 aaPredicted RBP16.33■□□□□ 0.2
RPS3AP29-201ENST00000437728 SEC24BO95487 1268 aa16.32■□□□□ 0.2
RPS3AP29-201ENST00000437728 TAOK2Q9UL54 1235 aa16.32■□□□□ 0.2
RPS3AP29-201ENST00000437728 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
RPS3AP29-201ENST00000437728 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
RPS3AP29-201ENST00000437728 MKRN3Q13064 507 aaKnown RBP16.29■□□□□ 0.2
RPS3AP29-201ENST00000437728 COLQQ9Y215 455 aaPredicted RBP16.28■□□□□ 0.2
RPS3AP29-201ENST00000437728 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
RPS3AP29-201ENST00000437728 POTEB2H3BUK9 544 aa16.27■□□□□ 0.2
RPS3AP29-201ENST00000437728 PLCG2P16885 1265 aa16.24■□□□□ 0.19
RPS3AP29-201ENST00000437728 IRX5P78411 483 aaPredicted RBP16.24■□□□□ 0.19
RPS3AP29-201ENST00000437728 SCRIBQ14160 1630 aa16.23■□□□□ 0.19
RPS3AP29-201ENST00000437728 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
RPS3AP29-201ENST00000437728 OCEL1Q9H607 264 aa16.2■□□□□ 0.18
RPS3AP29-201ENST00000437728 STK25O00506 426 aa16.19■□□□□ 0.18
RPS3AP29-201ENST00000437728 STK24Q9Y6E0 443 aa16.19■□□□□ 0.18
RPS3AP29-201ENST00000437728 EFCAB3Q8N7B9 438 aa16.18■□□□□ 0.18
RPS3AP29-201ENST00000437728 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
RPS3AP29-201ENST00000437728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.17■□□□□ 0.18
RPS3AP29-201ENST00000437728 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
RPS3AP29-201ENST00000437728 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
RPS3AP29-201ENST00000437728 PDCD7Q8N8D1 485 aaKnown RBP16.1■□□□□ 0.17
RPS3AP29-201ENST00000437728 RTN4Q9NQC3 1192 aaKnown RBP16.1■□□□□ 0.17
RPS3AP29-201ENST00000437728 OTUD5Q96G74 571 aa16.07■□□□□ 0.16
RPS3AP29-201ENST00000437728 SHROOM4Q9ULL8 1493 aa16.07■□□□□ 0.16
RPS3AP29-201ENST00000437728 SOX12O15370 315 aa16.06■□□□□ 0.16
RPS3AP29-201ENST00000437728 MAMSTRQ6ZN01 415 aa16.05■□□□□ 0.16
RPS3AP29-201ENST00000437728 ILDR1Q86SU0 546 aaPredicted RBP16.05■□□□□ 0.16
RPS3AP29-201ENST00000437728 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
RPS3AP29-201ENST00000437728 SCUBE2Q9NQ36 999 aa16.02■□□□□ 0.16
RPS3AP29-201ENST00000437728 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.16
RPS3AP29-201ENST00000437728 DPY19L2Q6NUT2 758 aa16.01■□□□□ 0.15
RPS3AP29-201ENST00000437728 HS6ST3Q8IZP7 471 aa16.01■□□□□ 0.15
RPS3AP29-201ENST00000437728 L3MBTL3Q96JM7 780 aaPredicted RBP15.98■□□□□ 0.15
RPS3AP29-201ENST00000437728 NLRP6P59044 892 aa15.95■□□□□ 0.14
RPS3AP29-201ENST00000437728 MS4A4AQ96JQ5 239 aa15.93■□□□□ 0.14
RPS3AP29-201ENST00000437728 MFRPQ9BY79 579 aa15.93■□□□□ 0.14
RPS3AP29-201ENST00000437728 G3V3G9 751 aa15.91■□□□□ 0.14
RPS3AP29-201ENST00000437728 FBXO22Q8NEZ5 403 aa15.9■□□□□ 0.14
RPS3AP29-201ENST00000437728 BOLA1Q9Y3E2 137 aa15.89■□□□□ 0.13
RPS3AP29-201ENST00000437728 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.87■□□□□ 0.13
RPS3AP29-201ENST00000437728 C3orf67Q6ZVT6 689 aa15.86■□□□□ 0.13
RPS3AP29-201ENST00000437728 SLAIN1Q8ND83 568 aa15.84■□□□□ 0.13
RPS3AP29-201ENST00000437728 DNAJC5Q9H3Z4 198 aa15.81■□□□□ 0.12
RPS3AP29-201ENST00000437728 NKX1-1Q15270 411 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms