RNA–Protein interactions for RNA: ENST00000436307.1

AP004289.1-201, humanhuman

BASIC

Gene AP004289.1, Length 2,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004289.1-201ENST00000436307 HOXD11P31277 338 aaPredicted RBP10.57□□□□□ -0.72
AP004289.1-201ENST00000436307 MYO15BQ96JP2 1530 aa10.56□□□□□ -0.72
AP004289.1-201ENST00000436307 C1orf115Q9H7X2 142 aa10.56□□□□□ -0.72
AP004289.1-201ENST00000436307 SHROOM4Q9ULL8 1493 aa10.56□□□□□ -0.72
AP004289.1-201ENST00000436307 ZMYND15Q9H091 742 aa10.56□□□□□ -0.72
AP004289.1-201ENST00000436307 LMOD2Q6P5Q4 547 aa10.54□□□□□ -0.72
AP004289.1-201ENST00000436307 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
AP004289.1-201ENST00000436307 RSPH6AQ9H0K4 717 aa10.53□□□□□ -0.72
AP004289.1-201ENST00000436307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.52□□□□□ -0.73
AP004289.1-201ENST00000436307 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
AP004289.1-201ENST00000436307 IGSF3O75054 1194 aa10.48□□□□□ -0.73
AP004289.1-201ENST00000436307 MKRN4PQ13434 485 aaPredicted RBP10.48□□□□□ -0.73
AP004289.1-201ENST00000436307 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
AP004289.1-201ENST00000436307 HS6ST3Q8IZP7 471 aa10.43□□□□□ -0.74
AP004289.1-201ENST00000436307 DMRT2Q9Y5R5 561 aa10.43□□□□□ -0.74
AP004289.1-201ENST00000436307 CUX2O14529 1486 aa10.43□□□□□ -0.74
AP004289.1-201ENST00000436307 PDIA4P13667 645 aaKnown RBP10.43□□□□□ -0.74
AP004289.1-201ENST00000436307 SCRIBQ14160 1630 aa10.42□□□□□ -0.74
AP004289.1-201ENST00000436307 ARID3CA6NKF2 412 aa10.41□□□□□ -0.74
AP004289.1-201ENST00000436307 SLC24A3Q9HC58 644 aa10.41□□□□□ -0.74
AP004289.1-201ENST00000436307 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
AP004289.1-201ENST00000436307 GTPBP6O43824 516 aaPredicted RBP10.38□□□□□ -0.75
AP004289.1-201ENST00000436307 ZC3H15Q8WU90 426 aaKnown RBP10.35□□□□□ -0.75
AP004289.1-201ENST00000436307 TRIM41Q8WV44 630 aa10.34□□□□□ -0.75
AP004289.1-201ENST00000436307 SAMD1Q6SPF0 538 aaPredicted RBP10.32□□□□□ -0.76
AP004289.1-201ENST00000436307 APBB1O00213 710 aa10.31□□□□□ -0.76
AP004289.1-201ENST00000436307 P3H3Q8IVL6 736 aa10.31□□□□□ -0.76
AP004289.1-201ENST00000436307 KCNV2Q8TDN2 545 aa10.31□□□□□ -0.76
AP004289.1-201ENST00000436307 ERCC6Q03468 1493 aa10.3□□□□□ -0.76
AP004289.1-201ENST00000436307 CIZ1Q9ULV3 898 aaPredicted RBP10.3□□□□□ -0.76
AP004289.1-201ENST00000436307 KCTD17Q8N5Z5 321 aa10.28□□□□□ -0.76
AP004289.1-201ENST00000436307 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
AP004289.1-201ENST00000436307 RNF25Q96BH1 459 aaPredicted RBP10.27□□□□□ -0.77
AP004289.1-201ENST00000436307 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
AP004289.1-201ENST00000436307 DCAF1Q9Y4B6 1507 aa10.26□□□□□ -0.77
AP004289.1-201ENST00000436307 PCGF6Q9BYE7 350 aa10.25□□□□□ -0.77
AP004289.1-201ENST00000436307 RAD21O60216 631 aa10.24□□□□□ -0.77
AP004289.1-201ENST00000436307 CDK11BP21127 795 aaKnown RBP10.23□□□□□ -0.77
AP004289.1-201ENST00000436307 CDK11AQ9UQ88 783 aaPredicted RBP10.23□□□□□ -0.77
AP004289.1-201ENST00000436307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.23□□□□□ -0.77
AP004289.1-201ENST00000436307 HNRNPUL2Q1KMD3 747 aaKnown RBP10.23□□□□□ -0.77
AP004289.1-201ENST00000436307 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
AP004289.1-201ENST00000436307 RGS22Q8NE09 1264 aa10.21□□□□□ -0.77
AP004289.1-201ENST00000436307 GPBP1L1Q9HC44 474 aaPredicted RBP10.21□□□□□ -0.77
AP004289.1-201ENST00000436307 IL27Q8NEV9 243 aa10.21□□□□□ -0.78
AP004289.1-201ENST00000436307 PPARGC1BQ86YN6 1023 aaKnown RBP10.2□□□□□ -0.78
AP004289.1-201ENST00000436307 MKRN3Q13064 507 aaKnown RBP10.19□□□□□ -0.78
AP004289.1-201ENST00000436307 PLCD3Q8N3E9 789 aa10.18□□□□□ -0.78
AP004289.1-201ENST00000436307 MTMR7Q9Y216 660 aa10.18□□□□□ -0.78
AP004289.1-201ENST00000436307 ZEB1P37275 1124 aaPredicted RBP10.17□□□□□ -0.78
AP004289.1-201ENST00000436307 U3KPZ7 1027 aaPredicted RBP10.17□□□□□ -0.78
AP004289.1-201ENST00000436307 CCDC82Q8N4S0 544 aa10.16□□□□□ -0.78
AP004289.1-201ENST00000436307 CHMP4AQ9BY43 222 aa10.16□□□□□ -0.78
AP004289.1-201ENST00000436307 HSP90B1P14625 803 aaKnown RBP10.15□□□□□ -0.78
AP004289.1-201ENST00000436307 NESP48681 1621 aa10.14□□□□□ -0.79
AP004289.1-201ENST00000436307 FOXD4L5Q5VV16 416 aaPredicted RBP10.14□□□□□ -0.79
AP004289.1-201ENST00000436307 FOXD4L4Q8WXT5 416 aaPredicted RBP10.14□□□□□ -0.79
AP004289.1-201ENST00000436307 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
AP004289.1-201ENST00000436307 ZMYND10O75800 440 aa10.11□□□□□ -0.79
AP004289.1-201ENST00000436307 RBM25P49756 843 aaKnown RBP10.11□□□□□ -0.79
AP004289.1-201ENST00000436307 THOC2Q8NI27 1593 aaKnown RBP10.11□□□□□ -0.79
AP004289.1-201ENST00000436307 AEBP1Q8IUX7 1158 aa10.1□□□□□ -0.79
AP004289.1-201ENST00000436307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.79
AP004289.1-201ENST00000436307 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
AP004289.1-201ENST00000436307 PUS7Q96PZ0 661 aaKnown RBP10.07□□□□□ -0.8
AP004289.1-201ENST00000436307 CADPS2Q86UW7 1296 aa10.07□□□□□ -0.8
AP004289.1-201ENST00000436307 MIER1Q8N108 512 aa10.06□□□□□ -0.8
AP004289.1-201ENST00000436307 STK25O00506 426 aa10.05□□□□□ -0.8
AP004289.1-201ENST00000436307 SEMA3EO15041 775 aa10.05□□□□□ -0.8
AP004289.1-201ENST00000436307 POLA2Q14181 598 aa10.05□□□□□ -0.8
AP004289.1-201ENST00000436307 TRAIPQ9BWF2 469 aa10.05□□□□□ -0.8
AP004289.1-201ENST00000436307 WDR70Q9NW82 654 aa10.05□□□□□ -0.8
AP004289.1-201ENST00000436307 MFAP1P55081 439 aaKnown RBP10.03□□□□□ -0.8
AP004289.1-201ENST00000436307 TMCO4Q5TGY1 634 aa10.03□□□□□ -0.8
AP004289.1-201ENST00000436307 KDM4CQ9H3R0 1056 aa10.03□□□□□ -0.8
AP004289.1-201ENST00000436307 DCAF8L1A6NGE4 600 aa10.02□□□□□ -0.81
AP004289.1-201ENST00000436307 SMARCA2P51531 1590 aa10.01□□□□□ -0.81
AP004289.1-201ENST00000436307 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
AP004289.1-201ENST00000436307 ATAD2BQ9ULI0 1458 aa10□□□□□ -0.81
AP004289.1-201ENST00000436307 TESPA1A2RU30 521 aaPredicted RBP9.99□□□□□ -0.81
AP004289.1-201ENST00000436307 RIOK3O14730 519 aaKnown RBP9.98□□□□□ -0.81
AP004289.1-201ENST00000436307 CLUAP1Q96AJ1 413 aa9.98□□□□□ -0.81
AP004289.1-201ENST00000436307 GZF1Q9H116 711 aaPredicted RBP9.98□□□□□ -0.81
AP004289.1-201ENST00000436307 KIF21AQ7Z4S6 1674 aa9.97□□□□□ -0.81
AP004289.1-201ENST00000436307 BARGINQ6ZT62 677 aa9.97□□□□□ -0.81
AP004289.1-201ENST00000436307 HMGXB3Q12766 1538 aa9.96□□□□□ -0.82
AP004289.1-201ENST00000436307 TRAK2O60296 914 aa9.94□□□□□ -0.82
AP004289.1-201ENST00000436307 AK7Q96M32 723 aa9.93□□□□□ -0.82
AP004289.1-201ENST00000436307 ARHGEF1Q92888 912 aaKnown RBP9.92□□□□□ -0.82
AP004289.1-201ENST00000436307 BAZ1AQ9NRL2 1556 aaPredicted RBP9.92□□□□□ -0.82
AP004289.1-201ENST00000436307 LAMC3Q9Y6N6 1575 aa9.92□□□□□ -0.82
AP004289.1-201ENST00000436307 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
AP004289.1-201ENST00000436307 ONECUT3O60422 494 aaPredicted RBP9.9□□□□□ -0.82
AP004289.1-201ENST00000436307 E9PSI1 815 aa9.9□□□□□ -0.83
AP004289.1-201ENST00000436307 FLIIQ13045 1269 aa9.9□□□□□ -0.83
AP004289.1-201ENST00000436307 FAM117AQ9C073 453 aa9.9□□□□□ -0.83
AP004289.1-201ENST00000436307 USP35Q9P2H5 1018 aa9.9□□□□□ -0.83
AP004289.1-201ENST00000436307 DHX37Q8IY37 1157 aaKnown RBP9.88□□□□□ -0.83
AP004289.1-201ENST00000436307 BCL11BQ9C0K0 894 aaPredicted RBP9.88□□□□□ -0.83
AP004289.1-201ENST00000436307 RYDENQ9NUL5 291 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms