RNA–Protein interactions for RNA: ENST00000435981.5

LINC01393-202, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 1 (best) BASIC

Gene LINC01393, Length 1,187 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-202ENST00000435981 ASTLQ6HA08 431 aaPredicted RBP16.42■□□□□ 0.22
LINC01393-202ENST00000435981 SLC39A7Q92504 469 aa16.42■□□□□ 0.22
LINC01393-202ENST00000435981 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
LINC01393-202ENST00000435981 NISCHQ9Y2I1 1504 aa16.37■□□□□ 0.21
LINC01393-202ENST00000435981 LCE2DQ5TA82 110 aaPredicted RBP16.37■□□□□ 0.21
LINC01393-202ENST00000435981 NPM1P06748 294 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC01393-202ENST00000435981 ATMINO43313 823 aaPredicted RBP16.33■□□□□ 0.2
LINC01393-202ENST00000435981 FAM163AQ96GL9 167 aaPredicted RBP16.31■□□□□ 0.2
LINC01393-202ENST00000435981 SCUBE2Q9NQ36 999 aa16.29■□□□□ 0.2
LINC01393-202ENST00000435981 MS4A3Q96HJ5 214 aa16.25■□□□□ 0.19
LINC01393-202ENST00000435981 MNX1P50219 401 aaPredicted RBP16.2■□□□□ 0.18
LINC01393-202ENST00000435981 PROM2Q8N271 834 aa16.15■□□□□ 0.18
LINC01393-202ENST00000435981 ATN1P54259 1190 aaPredicted RBP16.08■□□□□ 0.16
LINC01393-202ENST00000435981 CDAN1Q8IWY9 1227 aa16.07■□□□□ 0.16
LINC01393-202ENST00000435981 POTEFA5A3E0 1075 aa16■□□□□ 0.15
LINC01393-202ENST00000435981 CCDC61Q9Y6R9 512 aa15.94■□□□□ 0.14
LINC01393-202ENST00000435981 BMP2KQ9NSY1 1161 aaPredicted RBP15.93■□□□□ 0.14
LINC01393-202ENST00000435981 KIF12Q96FN5 646 aa15.9■□□□□ 0.14
LINC01393-202ENST00000435981 TSPYL2Q9H2G4 693 aaPredicted RBP15.9■□□□□ 0.14
LINC01393-202ENST00000435981 TIE1P35590 1138 aa15.87■□□□□ 0.13
LINC01393-202ENST00000435981 SEC24BO95487 1268 aa15.82■□□□□ 0.12
LINC01393-202ENST00000435981 COLQQ9Y215 455 aaPredicted RBP15.8■□□□□ 0.12
LINC01393-202ENST00000435981 TRPC6Q9Y210 931 aa15.78■□□□□ 0.12
LINC01393-202ENST00000435981 ST18O60284 1047 aa15.77■□□□□ 0.12
LINC01393-202ENST00000435981 MMRN1Q13201 1228 aa15.77■□□□□ 0.12
LINC01393-202ENST00000435981 IER5LQ5T953 404 aa15.74■□□□□ 0.11
LINC01393-202ENST00000435981 MIER1Q8N108 512 aa15.74■□□□□ 0.11
LINC01393-202ENST00000435981 MAP3K13O43283 966 aa15.72■□□□□ 0.11
LINC01393-202ENST00000435981 FKBP8Q14318 412 aa15.72■□□□□ 0.11
LINC01393-202ENST00000435981 TTLL13PA6NNM8 815 aa15.71■□□□□ 0.11
LINC01393-202ENST00000435981 SPNS2Q8IVW8 549 aa15.71■□□□□ 0.11
LINC01393-202ENST00000435981 SLAIN1Q8ND83 568 aa15.7■□□□□ 0.1
LINC01393-202ENST00000435981 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
LINC01393-202ENST00000435981 RASEFQ8IZ41 740 aa15.63■□□□□ 0.09
LINC01393-202ENST00000435981 TMEM121BQ9BXQ6 578 aaPredicted RBP15.63■□□□□ 0.09
LINC01393-202ENST00000435981 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
LINC01393-202ENST00000435981 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
LINC01393-202ENST00000435981 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
LINC01393-202ENST00000435981 SNPHO15079 494 aa15.49■□□□□ 0.07
LINC01393-202ENST00000435981 NUBP1P53384 320 aa15.48■□□□□ 0.07
LINC01393-202ENST00000435981 PLCG2P16885 1265 aa15.46■□□□□ 0.07
LINC01393-202ENST00000435981 PCDHB13Q9Y5F0 798 aa15.45■□□□□ 0.06
LINC01393-202ENST00000435981 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
LINC01393-202ENST00000435981 IRX5P78411 483 aaPredicted RBP15.37■□□□□ 0.05
LINC01393-202ENST00000435981 MARVELD3Q96A59 401 aa15.35■□□□□ 0.05
LINC01393-202ENST00000435981 TMEM106CQ9BVX2 250 aa15.35■□□□□ 0.05
LINC01393-202ENST00000435981 IFNL1Q8IU54 200 aa15.32■□□□□ 0.04
LINC01393-202ENST00000435981 FBXO3Q9UK99 471 aa15.32■□□□□ 0.04
LINC01393-202ENST00000435981 FAM212AQ96EL1 285 aa15.31■□□□□ 0.04
LINC01393-202ENST00000435981 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.31■□□□□ 0.04
LINC01393-202ENST00000435981 OCEL1Q9H607 264 aa15.3■□□□□ 0.04
LINC01393-202ENST00000435981 EMP3P54852 163 aa15.22■□□□□ 0.03
LINC01393-202ENST00000435981 VASPP50552 380 aaPredicted RBP15.21■□□□□ 0.03
LINC01393-202ENST00000435981 KRTAP3-3Q9BYR6 98 aa15.21■□□□□ 0.03
LINC01393-202ENST00000435981 KRTAP3-2Q9BYR7 98 aa15.21■□□□□ 0.03
LINC01393-202ENST00000435981 DCAF8Q5TAQ9 597 aa15.2■□□□□ 0.02
LINC01393-202ENST00000435981 PYGBP11216 843 aa15.16■□□□□ 0.02
LINC01393-202ENST00000435981 HS3ST6Q96QI5 342 aa15.14■□□□□ 0.01
LINC01393-202ENST00000435981 KLHL34Q8N239 644 aa15.11■□□□□ 0.01
LINC01393-202ENST00000435981 POTEB3A0JP26 581 aa15.09■□□□□ 0.01
LINC01393-202ENST00000435981 POTEBQ6S5H4 581 aa15.09■□□□□ 0.01
LINC01393-202ENST00000435981 FAM205CA6NFA0 338 aa15.07■□□□□ 0
LINC01393-202ENST00000435981 PCDHB8Q9UN66 801 aa15.06■□□□□ 0
LINC01393-202ENST00000435981 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
LINC01393-202ENST00000435981 GSE1Q14687 1217 aa15□□□□□ -0.01
LINC01393-202ENST00000435981 L3MBTL3Q96JM7 780 aaPredicted RBP15□□□□□ -0.01
LINC01393-202ENST00000435981 PDCD7Q8N8D1 485 aaKnown RBP14.97□□□□□ -0.01
LINC01393-202ENST00000435981 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.01
LINC01393-202ENST00000435981 CHRM1P11229 460 aaPredicted RBP14.91□□□□□ -0.02
LINC01393-202ENST00000435981 ZNF467Q7Z7K2 595 aaPredicted RBP14.89□□□□□ -0.03
LINC01393-202ENST00000435981 RNF166Q96A37 237 aaPredicted RBP14.89□□□□□ -0.03
LINC01393-202ENST00000435981 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
LINC01393-202ENST00000435981 MKRN3Q13064 507 aaKnown RBP14.83□□□□□ -0.04
LINC01393-202ENST00000435981 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
LINC01393-202ENST00000435981 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
LINC01393-202ENST00000435981 PSEN1P49768 467 aa14.8□□□□□ -0.04
LINC01393-202ENST00000435981 HOXB1P14653 301 aaPredicted RBP14.77□□□□□ -0.05
LINC01393-202ENST00000435981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.77□□□□□ -0.05
LINC01393-202ENST00000435981 HOXB3P14651 431 aaPredicted RBP14.75□□□□□ -0.05
LINC01393-202ENST00000435981 MYT1LQ9UL68 1186 aa14.75□□□□□ -0.05
LINC01393-202ENST00000435981 ERBB3P21860 1342 aa14.72□□□□□ -0.05
LINC01393-202ENST00000435981 PDAP1Q13442 181 aaKnown RBP14.71□□□□□ -0.05
LINC01393-202ENST00000435981 ILDR1Q86SU0 546 aaPredicted RBP14.7□□□□□ -0.06
LINC01393-202ENST00000435981 ZNF710Q8N1W2 664 aa14.7□□□□□ -0.06
LINC01393-202ENST00000435981 DOK7Q18PE1 504 aa14.66□□□□□ -0.06
LINC01393-202ENST00000435981 PTGER2P43116 358 aa14.65□□□□□ -0.06
LINC01393-202ENST00000435981 CABP2Q9NPB3 220 aa14.63□□□□□ -0.07
LINC01393-202ENST00000435981 G3V3G9 751 aa14.61□□□□□ -0.07
LINC01393-202ENST00000435981 DPY19L2Q6NUT2 758 aa14.59□□□□□ -0.07
LINC01393-202ENST00000435981 BOLA1Q9Y3E2 137 aa14.59□□□□□ -0.07
LINC01393-202ENST00000435981 VARS2Q5ST30 1063 aaKnown RBP14.58□□□□□ -0.08
LINC01393-202ENST00000435981 RIMBP2O15034 1052 aa14.57□□□□□ -0.08
LINC01393-202ENST00000435981 ZNF687Q8N1G0 1237 aa14.56□□□□□ -0.08
LINC01393-202ENST00000435981 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
LINC01393-202ENST00000435981 CCDC180Q9P1Z9 1646 aa14.52□□□□□ -0.08
LINC01393-202ENST00000435981 ZSWIM6Q9HCJ5 1215 aa14.49□□□□□ -0.09
LINC01393-202ENST00000435981 RNF25Q96BH1 459 aaPredicted RBP14.48□□□□□ -0.09
LINC01393-202ENST00000435981 EFCAB3Q8N7B9 438 aa14.46□□□□□ -0.09
LINC01393-202ENST00000435981 RIOK3O14730 519 aaKnown RBP14.41□□□□□ -0.1
LINC01393-202ENST00000435981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms