RNA–Protein interactions for RNA: ENST00000435644.6

RB1CC1-202, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-202ENST00000435644 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.96■□□□□ 0.95
RB1CC1-202ENST00000435644 PLEKHD1A6NEE1 506 aa20.96■□□□□ 0.95
RB1CC1-202ENST00000435644 MYH16Q9H6N6 1097 aa20.95■□□□□ 0.94
RB1CC1-202ENST00000435644 RGL3Q3MIN7 710 aa20.94■□□□□ 0.94
RB1CC1-202ENST00000435644 ERCC6Q03468 1493 aa20.91■□□□□ 0.94
RB1CC1-202ENST00000435644 PPM1GO15355 546 aaPredicted RBP20.91■□□□□ 0.94
RB1CC1-202ENST00000435644 HIRIP3Q9BW71 556 aaPredicted RBP20.88■□□□□ 0.93
RB1CC1-202ENST00000435644 NPHP1O15259 732 aa20.87■□□□□ 0.93
RB1CC1-202ENST00000435644 CDK11BP21127 795 aaKnown RBP20.86■□□□□ 0.93
RB1CC1-202ENST00000435644 MRS2Q9HD23 443 aa20.86■□□□□ 0.93
RB1CC1-202ENST00000435644 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
RB1CC1-202ENST00000435644 TULP1O00294 542 aaPredicted RBP20.81■□□□□ 0.92
RB1CC1-202ENST00000435644 MLECQ14165 292 aa20.77■□□□□ 0.92
RB1CC1-202ENST00000435644 CFDP1Q9UEE9 299 aaPredicted RBP20.75■□□□□ 0.91
RB1CC1-202ENST00000435644 POGKQ9P215 609 aa20.75■□□□□ 0.91
RB1CC1-202ENST00000435644 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
RB1CC1-202ENST00000435644 LAS1LQ9Y4W2 734 aaKnown RBP20.73■□□□□ 0.91
RB1CC1-202ENST00000435644 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
RB1CC1-202ENST00000435644 CFAP53Q96M91 514 aa20.71■□□□□ 0.91
RB1CC1-202ENST00000435644 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
RB1CC1-202ENST00000435644 IRX6P78412 446 aaPredicted RBP20.71■□□□□ 0.91
RB1CC1-202ENST00000435644 EIF4G2P78344 907 aaKnown RBP eCLIP20.71■□□□□ 0.91
RB1CC1-202ENST00000435644 CLIP1P30622 1438 aa20.69■□□□□ 0.9
RB1CC1-202ENST00000435644 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
RB1CC1-202ENST00000435644 TAOK2Q9UL54 1235 aa20.65■□□□□ 0.9
RB1CC1-202ENST00000435644 KNSTRNQ9Y448 316 aa20.64■□□□□ 0.9
RB1CC1-202ENST00000435644 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
RB1CC1-202ENST00000435644 NEUROD2Q15784 382 aa20.63■□□□□ 0.89
RB1CC1-202ENST00000435644 TPRNQ4KMQ1 711 aa20.61■□□□□ 0.89
RB1CC1-202ENST00000435644 SOX12O15370 315 aa20.6■□□□□ 0.89
RB1CC1-202ENST00000435644 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
RB1CC1-202ENST00000435644 NBR1Q14596 966 aa20.6■□□□□ 0.89
RB1CC1-202ENST00000435644 EIF5BO60841 1220 aaKnown RBP20.59■□□□□ 0.89
RB1CC1-202ENST00000435644 CDCA8Q53HL2 280 aa20.59■□□□□ 0.89
RB1CC1-202ENST00000435644 MIER1Q8N108 512 aa20.58■□□□□ 0.89
RB1CC1-202ENST00000435644 CARD11Q9BXL7 1154 aa20.58■□□□□ 0.89
RB1CC1-202ENST00000435644 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.89
RB1CC1-202ENST00000435644 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
RB1CC1-202ENST00000435644 ANP32EQ9BTT0 268 aa20.54■□□□□ 0.88
RB1CC1-202ENST00000435644 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
RB1CC1-202ENST00000435644 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
RB1CC1-202ENST00000435644 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
RB1CC1-202ENST00000435644 GOLGA2Q08379 1002 aa20.51■□□□□ 0.87
RB1CC1-202ENST00000435644 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
RB1CC1-202ENST00000435644 NUDCQ9Y266 331 aa20.5■□□□□ 0.87
RB1CC1-202ENST00000435644 OS9Q13438 667 aaPredicted RBP20.5■□□□□ 0.87
RB1CC1-202ENST00000435644 GLIPR1L2Q4G1C9 344 aa20.5■□□□□ 0.87
RB1CC1-202ENST00000435644 U2SURPO15042 1029 aaKnown RBP20.49■□□□□ 0.87
RB1CC1-202ENST00000435644 SAFB2Q14151 953 aaKnown RBP eCLIP20.48■□□□□ 0.874e-7■■□□□ 13.3
RB1CC1-202ENST00000435644 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
RB1CC1-202ENST00000435644 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
RB1CC1-202ENST00000435644 HDGFP51858 240 aaKnown RBP20.46■□□□□ 0.87
RB1CC1-202ENST00000435644 CC2D1BQ5T0F9 858 aaKnown RBP20.46■□□□□ 0.87
RB1CC1-202ENST00000435644 ZRSR1Q15695 479 aaKnown RBP20.45■□□□□ 0.86
RB1CC1-202ENST00000435644 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
RB1CC1-202ENST00000435644 KANK1Q14678 1352 aa20.45■□□□□ 0.86
RB1CC1-202ENST00000435644 SRPK2P78362 688 aaKnown RBP20.43■□□□□ 0.86
RB1CC1-202ENST00000435644 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
RB1CC1-202ENST00000435644 GGT6Q6P531 493 aa20.41■□□□□ 0.86
RB1CC1-202ENST00000435644 BECN1Q14457 450 aa20.41■□□□□ 0.86
RB1CC1-202ENST00000435644 CCNB3Q8WWL7 1395 aa20.4■□□□□ 0.86
RB1CC1-202ENST00000435644 NAP1L2Q9ULW6 460 aaPredicted RBP20.4■□□□□ 0.86
RB1CC1-202ENST00000435644 FRAT1Q92837 279 aaPredicted RBP20.4■□□□□ 0.86
RB1CC1-202ENST00000435644 PAK3O75914 559 aaPredicted RBP20.39■□□□□ 0.85
RB1CC1-202ENST00000435644 STK26Q9P289 416 aa20.39■□□□□ 0.85
RB1CC1-202ENST00000435644 CCDC9Q9Y3X0 531 aaKnown RBP20.37■□□□□ 0.85
RB1CC1-202ENST00000435644 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
RB1CC1-202ENST00000435644 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
RB1CC1-202ENST00000435644 FGD1P98174 961 aa20.35■□□□□ 0.85
RB1CC1-202ENST00000435644 GOLGA6L22H0YM25 854 aa20.34■□□□□ 0.85
RB1CC1-202ENST00000435644 CSB-PGBD3P0DP91 1061 aa20.33■□□□□ 0.85
RB1CC1-202ENST00000435644 NCBP3Q53F19 620 aaKnown RBP20.33■□□□□ 0.84
RB1CC1-202ENST00000435644 DCAF11Q8TEB1 546 aa20.33■□□□□ 0.84
RB1CC1-202ENST00000435644 ZNF330Q9Y3S2 320 aaPredicted RBP20.31■□□□□ 0.84
RB1CC1-202ENST00000435644 CLSTN1O94985 981 aa20.31■□□□□ 0.84
RB1CC1-202ENST00000435644 KCNJ4P48050 445 aa20.31■□□□□ 0.84
RB1CC1-202ENST00000435644 EEA1Q15075 1411 aa20.3■□□□□ 0.84
RB1CC1-202ENST00000435644 PNNQ9H307 717 aaKnown RBP20.3■□□□□ 0.84
RB1CC1-202ENST00000435644 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
RB1CC1-202ENST00000435644 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.84
RB1CC1-202ENST00000435644 TMF1P82094 1093 aa20.26■□□□□ 0.83
RB1CC1-202ENST00000435644 RTF1Q92541 710 aaKnown RBP20.25■□□□□ 0.83
RB1CC1-202ENST00000435644 NACADO15069 1562 aa20.25■□□□□ 0.83
RB1CC1-202ENST00000435644 PTMAP06454 111 aaKnown RBP20.24■□□□□ 0.83
RB1CC1-202ENST00000435644 MORC1Q86VD1 984 aa20.23■□□□□ 0.83
RB1CC1-202ENST00000435644 TRIM44Q96DX7 344 aaPredicted RBP20.22■□□□□ 0.83
RB1CC1-202ENST00000435644 RGS3P49796 1198 aa20.22■□□□□ 0.83
RB1CC1-202ENST00000435644 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
RB1CC1-202ENST00000435644 TMX4Q9H1E5 349 aaPredicted RBP20.18■□□□□ 0.82
RB1CC1-202ENST00000435644 CUX2O14529 1486 aa20.18■□□□□ 0.82
RB1CC1-202ENST00000435644 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
RB1CC1-202ENST00000435644 CHMP4BQ9H444 224 aaKnown RBP20.18■□□□□ 0.82
RB1CC1-202ENST00000435644 PLCB2Q00722 1185 aa20.17■□□□□ 0.82
RB1CC1-202ENST00000435644 SUPT16HQ9Y5B9 1047 aaKnown RBP20.16■□□□□ 0.82
RB1CC1-202ENST00000435644 CARMIL1Q5VZK9 1371 aa20.15■□□□□ 0.82
RB1CC1-202ENST00000435644 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
RB1CC1-202ENST00000435644 MS4A1P11836 297 aa20.12■□□□□ 0.81
RB1CC1-202ENST00000435644 NUTM2DQ5VT03 806 aaPredicted RBP20.12■□□□□ 0.81
RB1CC1-202ENST00000435644 TNIKQ9UKE5 1360 aa20.11■□□□□ 0.81
RB1CC1-202ENST00000435644 DNTTIP2Q5QJE6 756 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms