RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 CARMIL2Q6F5E8 1435 aa21.17■□□□□ 0.98
NEDD4-202ENST00000435532 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
NEDD4-202ENST00000435532 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.97
NEDD4-202ENST00000435532 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
NEDD4-202ENST00000435532 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
NEDD4-202ENST00000435532 A0A0G2JS52 829 aa21.11■□□□□ 0.97
NEDD4-202ENST00000435532 ZBTB7CA1YPR0 619 aa21.11■□□□□ 0.97
NEDD4-202ENST00000435532 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
NEDD4-202ENST00000435532 CCNB3Q8WWL7 1395 aa21.11■□□□□ 0.97
NEDD4-202ENST00000435532 HDGFP51858 240 aaKnown RBP21.09■□□□□ 0.97
NEDD4-202ENST00000435532 WDR43Q15061 677 aaKnown RBP eCLIP21.09■□□□□ 0.97
NEDD4-202ENST00000435532 KANK1Q14678 1352 aa21.09■□□□□ 0.97
NEDD4-202ENST00000435532 RTL5Q5HYW3 569 aaPredicted RBP21.08■□□□□ 0.97
NEDD4-202ENST00000435532 SOGA1O94964 1423 aa21.08■□□□□ 0.96
NEDD4-202ENST00000435532 TNIKQ9UKE5 1360 aa21.08■□□□□ 0.96
NEDD4-202ENST00000435532 CDCA8Q53HL2 280 aa21.04■□□□□ 0.96
NEDD4-202ENST00000435532 TMC1Q8TDI8 760 aa21.01■□□□□ 0.95
NEDD4-202ENST00000435532 SENP3Q9H4L4 574 aaPredicted RBP21.01■□□□□ 0.95
NEDD4-202ENST00000435532 CCDC88BA6NC98 1476 aa20.99■□□□□ 0.95
NEDD4-202ENST00000435532 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
NEDD4-202ENST00000435532 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
NEDD4-202ENST00000435532 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
NEDD4-202ENST00000435532 PLEKHG5O94827 1062 aa20.97■□□□□ 0.95
NEDD4-202ENST00000435532 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
NEDD4-202ENST00000435532 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.94■□□□□ 0.94
NEDD4-202ENST00000435532 POGKQ9P215 609 aa20.94■□□□□ 0.94
NEDD4-202ENST00000435532 MLECQ14165 292 aa20.93■□□□□ 0.94
NEDD4-202ENST00000435532 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
NEDD4-202ENST00000435532 CFAP53Q96M91 514 aa20.9■□□□□ 0.94
NEDD4-202ENST00000435532 DDX10Q13206 875 aaKnown RBP20.9■□□□□ 0.94
NEDD4-202ENST00000435532 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
NEDD4-202ENST00000435532 FAM9BQ8IZU0 186 aa20.89■□□□□ 0.94
NEDD4-202ENST00000435532 MYT1Q01538 1121 aa20.86■□□□□ 0.93
NEDD4-202ENST00000435532 EFCAB2Q5VUJ9 269 aa20.84■□□□□ 0.93
NEDD4-202ENST00000435532 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
NEDD4-202ENST00000435532 LMOD2Q6P5Q4 547 aa20.84■□□□□ 0.93
NEDD4-202ENST00000435532 HNRNPUQ00839 825 aaKnown RBP eCLIP20.83■□□□□ 0.92
NEDD4-202ENST00000435532 ATAD2BQ9ULI0 1458 aa20.82■□□□□ 0.92
NEDD4-202ENST00000435532 KNSTRNQ9Y448 316 aa20.8■□□□□ 0.92
NEDD4-202ENST00000435532 CARD11Q9BXL7 1154 aa20.79■□□□□ 0.92
NEDD4-202ENST00000435532 MYH16Q9H6N6 1097 aa20.79■□□□□ 0.92
NEDD4-202ENST00000435532 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
NEDD4-202ENST00000435532 FMN1Q68DA7 1419 aa20.78■□□□□ 0.92
NEDD4-202ENST00000435532 MRS2Q9HD23 443 aa20.78■□□□□ 0.92
NEDD4-202ENST00000435532 UPF2Q9HAU5 1272 aaKnown RBP20.77■□□□□ 0.92
NEDD4-202ENST00000435532 GGT6Q6P531 493 aa20.76■□□□□ 0.91
NEDD4-202ENST00000435532 OSCARQ8IYS5 282 aa20.74■□□□□ 0.91
NEDD4-202ENST00000435532 FANCD2Q9BXW9 1451 aa20.73■□□□□ 0.91
NEDD4-202ENST00000435532 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
NEDD4-202ENST00000435532 ARHGAP35Q9NRY4 1499 aa20.72■□□□□ 0.91
NEDD4-202ENST00000435532 NUDCQ9Y266 331 aa20.71■□□□□ 0.91
NEDD4-202ENST00000435532 PPM1GO15355 546 aaPredicted RBP20.7■□□□□ 0.9
NEDD4-202ENST00000435532 WIZO95785 1651 aa20.69■□□□□ 0.9
NEDD4-202ENST00000435532 ANP32AP39687 249 aaKnown RBP20.68■□□□□ 0.9
NEDD4-202ENST00000435532 HSP90AA1P07900 732 aaKnown RBP20.68■□□□□ 0.9
NEDD4-202ENST00000435532 RAPGEF2Q9Y4G8 1499 aa20.66■□□□□ 0.9
NEDD4-202ENST00000435532 JPH4Q96JJ6 628 aa20.66■□□□□ 0.9
NEDD4-202ENST00000435532 ARXQ96QS3 562 aa20.66■□□□□ 0.9
NEDD4-202ENST00000435532 MAPK8IP3Q9UPT6 1336 aa20.64■□□□□ 0.9
NEDD4-202ENST00000435532 PNNQ9H307 717 aaKnown RBP20.63■□□□□ 0.89
NEDD4-202ENST00000435532 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
NEDD4-202ENST00000435532 GTF3C3Q9Y5Q9 886 aa20.61■□□□□ 0.89
NEDD4-202ENST00000435532 EID1Q9Y6B2 187 aa20.6■□□□□ 0.89
NEDD4-202ENST00000435532 ANKRD30AQ9BXX3 1397 aa20.6■□□□□ 0.89
NEDD4-202ENST00000435532 NPHP1O15259 732 aa20.6■□□□□ 0.89
NEDD4-202ENST00000435532 TMF1P82094 1093 aa20.59■□□□□ 0.89
NEDD4-202ENST00000435532 SRPK2P78362 688 aaKnown RBP20.57■□□□□ 0.88
NEDD4-202ENST00000435532 DCAF11Q8TEB1 546 aa20.57■□□□□ 0.88
NEDD4-202ENST00000435532 CCDC18Q5T9S5 1454 aa20.56■□□□□ 0.88
NEDD4-202ENST00000435532 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
NEDD4-202ENST00000435532 SPAG9O60271 1321 aaKnown RBP20.56■□□□□ 0.88
NEDD4-202ENST00000435532 HIRIP3Q9BW71 556 aaPredicted RBP20.55■□□□□ 0.88
NEDD4-202ENST00000435532 VPS8Q8N3P4 1428 aa20.55■□□□□ 0.88
NEDD4-202ENST00000435532 PTPRGP23470 1445 aa20.53■□□□□ 0.88
NEDD4-202ENST00000435532 KIF3BO15066 747 aa20.51■□□□□ 0.87
NEDD4-202ENST00000435532 HDGFL2Q7Z4V5 671 aaPredicted RBP20.5■□□□□ 0.87
NEDD4-202ENST00000435532 CCDC136Q96JN2 1154 aa20.5■□□□□ 0.87
NEDD4-202ENST00000435532 FKBP8Q14318 412 aa20.49■□□□□ 0.87
NEDD4-202ENST00000435532 PKD2Q13563 968 aa20.48■□□□□ 0.87
NEDD4-202ENST00000435532 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
NEDD4-202ENST00000435532 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
NEDD4-202ENST00000435532 STK26Q9P289 416 aa20.46■□□□□ 0.87
NEDD4-202ENST00000435532 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
NEDD4-202ENST00000435532 NUP155O75694 1391 aa20.44■□□□□ 0.86
NEDD4-202ENST00000435532 LAS1LQ9Y4W2 734 aaKnown RBP20.44■□□□□ 0.86
NEDD4-202ENST00000435532 TIMELESSQ9UNS1 1208 aa20.44■□□□□ 0.86
NEDD4-202ENST00000435532 HNRNPMP52272 730 aaKnown RBP eCLIP20.43■□□□□ 0.86
NEDD4-202ENST00000435532 ANP32BQ92688 251 aaKnown RBP20.43■□□□□ 0.86
NEDD4-202ENST00000435532 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
NEDD4-202ENST00000435532 FHOD3Q2V2M9 1422 aa20.42■□□□□ 0.86
NEDD4-202ENST00000435532 SAFB2Q14151 953 aaKnown RBP eCLIP20.42■□□□□ 0.86
NEDD4-202ENST00000435532 CHMP4BQ9H444 224 aaKnown RBP20.42■□□□□ 0.86
NEDD4-202ENST00000435532 NCAPD3P42695 1498 aa20.42■□□□□ 0.86
NEDD4-202ENST00000435532 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
NEDD4-202ENST00000435532 TNNT2P45379 298 aaPredicted RBP20.41■□□□□ 0.86
NEDD4-202ENST00000435532 EIF3AQ14152 1382 aaKnown RBP20.4■□□□□ 0.86
NEDD4-202ENST00000435532 EIF5BO60841 1220 aaKnown RBP20.4■□□□□ 0.86
NEDD4-202ENST00000435532 PAK3O75914 559 aaPredicted RBP20.4■□□□□ 0.86
NEDD4-202ENST00000435532 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.86
NEDD4-202ENST00000435532 FTSJ3Q8IY81 847 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms