RNA–Protein interactions for RNA: ENST00000435314.5

RFX5-208, Transcript of regulatory factor X5, human

TSL 4

Gene RFX5, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX5-208	ENST00000435314	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	8	□□□□□ -1.13
RFX5-208	ENST00000435314	ARID3A	Q99856	593 aa		8	□□□□□ -1.13
RFX5-208	ENST00000435314	CACNB1	Q02641	598 aa	Predicted RBP	7.99	□□□□□ -1.13
RFX5-208	ENST00000435314	PDIA4	P13667	645 aa	Known RBP	7.98	□□□□□ -1.13
RFX5-208	ENST00000435314	HS6ST3	Q8IZP7	471 aa		7.97	□□□□□ -1.13
RFX5-208	ENST00000435314	P3H3	Q8IVL6	736 aa		7.94	□□□□□ -1.14
RFX5-208	ENST00000435314	NECTIN2	Q92692	538 aa		7.93	□□□□□ -1.14
RFX5-208	ENST00000435314	RNF39	Q9H2S5	420 aa		7.93	□□□□□ -1.14
RFX5-208	ENST00000435314	C1orf115	Q9H7X2	142 aa		7.93	□□□□□ -1.14
RFX5-208	ENST00000435314	HMGB1	P09429	215 aa	Known RBP	7.92	□□□□□ -1.14
RFX5-208	ENST00000435314	SAMD1	Q6SPF0	538 aa	Predicted RBP	7.92	□□□□□ -1.14
RFX5-208	ENST00000435314	UNC13A	Q9UPW8	1703 aa		7.92	□□□□□ -1.14
RFX5-208	ENST00000435314	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	7.9	□□□□□ -1.14
RFX5-208	ENST00000435314	HNRNPUL2	Q1KMD3	747 aa	Known RBP	7.9	□□□□□ -1.14
RFX5-208	ENST00000435314	IGSF3	O75054	1194 aa		7.89	□□□□□ -1.15
RFX5-208	ENST00000435314	ZNF219	Q9P2Y4	722 aa	Predicted RBP	7.89	□□□□□ -1.15
RFX5-208	ENST00000435314	MKRN4P	Q13434	485 aa	Predicted RBP	7.88	□□□□□ -1.15
RFX5-208	ENST00000435314	SLC24A3	Q9HC58	644 aa		7.88	□□□□□ -1.15
RFX5-208	ENST00000435314	GTPBP6	O43824	516 aa	Predicted RBP	7.87	□□□□□ -1.15
RFX5-208	ENST00000435314	ZC3H15	Q8WU90	426 aa	Known RBP	7.87	□□□□□ -1.15
RFX5-208	ENST00000435314	RB1CC1	Q8TDY2	1594 aa		7.87	□□□□□ -1.15
RFX5-208	ENST00000435314	CDK11B	P21127	795 aa	Known RBP	7.85	□□□□□ -1.15
RFX5-208	ENST00000435314	NKX1-1	Q15270	411 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX5-208	ENST00000435314	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.85	□□□□□ -1.15
RFX5-208	ENST00000435314	HSP90B1	P14625	803 aa	Known RBP	7.84	□□□□□ -1.15
RFX5-208	ENST00000435314	KCTD17	Q8N5Z5	321 aa		7.82	□□□□□ -1.16
RFX5-208	ENST00000435314	NACAD	O15069	1562 aa		7.8	□□□□□ -1.16
RFX5-208	ENST00000435314	ARID3C	A6NKF2	412 aa		7.8	□□□□□ -1.16
RFX5-208	ENST00000435314	APBB1	O00213	710 aa		7.8	□□□□□ -1.16
RFX5-208	ENST00000435314	RAD21	O60216	631 aa		7.79	□□□□□ -1.16
RFX5-208	ENST00000435314	TRIM41	Q8WV44	630 aa		7.79	□□□□□ -1.16
RFX5-208	ENST00000435314	CIZ1	Q9ULV3	898 aa	Predicted RBP	7.79	□□□□□ -1.16
RFX5-208	ENST00000435314	C1QBP	Q07021	282 aa	Known RBP	7.78	□□□□□ -1.16
RFX5-208	ENST00000435314	RGS22	Q8NE09	1264 aa		7.78	□□□□□ -1.16
RFX5-208	ENST00000435314	KCNV2	Q8TDN2	545 aa		7.78	□□□□□ -1.16
RFX5-208	ENST00000435314	PUS7	Q96PZ0	661 aa	Known RBP	7.77	□□□□□ -1.17
RFX5-208	ENST00000435314	TRAIP	Q9BWF2	469 aa		7.74	□□□□□ -1.17
RFX5-208	ENST00000435314	BICRA	Q9NZM4	1560 aa		7.74	□□□□□ -1.17
RFX5-208	ENST00000435314	PLCD3	Q8N3E9	789 aa		7.73	□□□□□ -1.17
RFX5-208	ENST00000435314	STAG3	Q9UJ98	1225 aa		7.72	□□□□□ -1.17
RFX5-208	ENST00000435314	ZMYND10	O75800	440 aa		7.71	□□□□□ -1.18
RFX5-208	ENST00000435314	MKRN3	Q13064	507 aa	Known RBP	7.7	□□□□□ -1.18
RFX5-208	ENST00000435314	RNF25	Q96BH1	459 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX5-208	ENST00000435314	WDR70	Q9NW82	654 aa		7.7	□□□□□ -1.18
RFX5-208	ENST00000435314	MTMR7	Q9Y216	660 aa		7.7	□□□□□ -1.18
RFX5-208	ENST00000435314	CCDC82	Q8N4S0	544 aa		7.69	□□□□□ -1.18
RFX5-208	ENST00000435314	IL27	Q8NEV9	243 aa		7.69	□□□□□ -1.18
RFX5-208	ENST00000435314	CHMP4A	Q9BY43	222 aa		7.69	□□□□□ -1.18
RFX5-208	ENST00000435314	MYO15B	Q96JP2	1530 aa		7.68	□□□□□ -1.18
RFX5-208	ENST00000435314	TMCO4	Q5TGY1	634 aa		7.67	□□□□□ -1.18
RFX5-208	ENST00000435314	RYDEN	Q9NUL5	291 aa	Known RBP	7.67	□□□□□ -1.18
RFX5-208	ENST00000435314		U3KPZ7	1027 aa	Predicted RBP	7.67	□□□□□ -1.18
RFX5-208	ENST00000435314	PLEKHG5	O94827	1062 aa		7.66	□□□□□ -1.18
RFX5-208	ENST00000435314	RBM25	P49756	843 aa	Known RBP	7.66	□□□□□ -1.18
RFX5-208	ENST00000435314	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	7.66	□□□□□ -1.18
RFX5-208	ENST00000435314	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.66	□□□□□ -1.18
RFX5-208	ENST00000435314	PABPN1	Q86U42	306 aa	Known RBP eCLIP	7.65	□□□□□ -1.18
RFX5-208	ENST00000435314	AEBP1	Q8IUX7	1158 aa		7.65	□□□□□ -1.18
RFX5-208	ENST00000435314	ZCCHC6	Q5VYS8	1495 aa	Known RBP	7.64	□□□□□ -1.19
RFX5-208	ENST00000435314	MFAP1	P55081	439 aa	Known RBP	7.64	□□□□□ -1.19
RFX5-208	ENST00000435314	FLII	Q13045	1269 aa		7.64	□□□□□ -1.19
RFX5-208	ENST00000435314	MIER1	Q8N108	512 aa		7.63	□□□□□ -1.19
RFX5-208	ENST00000435314	TESPA1	A2RU30	521 aa	Predicted RBP	7.62	□□□□□ -1.19
RFX5-208	ENST00000435314	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.62	□□□□□ -1.19
RFX5-208	ENST00000435314	BARGIN	Q6ZT62	677 aa		7.62	□□□□□ -1.19
RFX5-208	ENST00000435314	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.62	□□□□□ -1.19
RFX5-208	ENST00000435314	ARHGEF1	Q92888	912 aa	Known RBP	7.61	□□□□□ -1.19
RFX5-208	ENST00000435314	ZNF428	Q96B54	188 aa		7.61	□□□□□ -1.19
RFX5-208	ENST00000435314	AK7	Q96M32	723 aa		7.61	□□□□□ -1.19
RFX5-208	ENST00000435314	KDM4C	Q9H3R0	1056 aa		7.61	□□□□□ -1.19
RFX5-208	ENST00000435314		E9PSI1	815 aa		7.6	□□□□□ -1.19
RFX5-208	ENST00000435314	STK25	O00506	426 aa		7.6	□□□□□ -1.19
RFX5-208	ENST00000435314	RIOK3	O14730	519 aa	Known RBP	7.6	□□□□□ -1.19
RFX5-208	ENST00000435314	DCAF1	Q9Y4B6	1507 aa		7.6	□□□□□ -1.19
RFX5-208	ENST00000435314		A6NJR5	290 aa		7.59	□□□□□ -1.19
RFX5-208	ENST00000435314	TRAK2	O60296	914 aa		7.59	□□□□□ -1.19
RFX5-208	ENST00000435314	POLA2	Q14181	598 aa		7.59	□□□□□ -1.19
RFX5-208	ENST00000435314	ZBTB47	Q9UFB7	747 aa	Predicted RBP	7.59	□□□□□ -1.19
RFX5-208	ENST00000435314	GZF1	Q9H116	711 aa	Predicted RBP	7.58	□□□□□ -1.2
RFX5-208	ENST00000435314	SCRIB	Q14160	1630 aa		7.57	□□□□□ -1.2
RFX5-208	ENST00000435314	SEMA3E	O15041	775 aa		7.56	□□□□□ -1.2
RFX5-208	ENST00000435314	CADPS2	Q86UW7	1296 aa		7.56	□□□□□ -1.2
RFX5-208	ENST00000435314	VGF	O15240	615 aa	Predicted RBP	7.54	□□□□□ -1.2
RFX5-208	ENST00000435314	GSE1	Q14687	1217 aa		7.54	□□□□□ -1.2
RFX5-208	ENST00000435314	ONECUT3	O60422	494 aa	Predicted RBP	7.52	□□□□□ -1.21
RFX5-208	ENST00000435314	SMYD5	Q6GMV2	418 aa		7.52	□□□□□ -1.21
RFX5-208	ENST00000435314	CC2D2A	Q9P2K1	1620 aa		7.52	□□□□□ -1.21
RFX5-208	ENST00000435314	CLUAP1	Q96AJ1	413 aa		7.51	□□□□□ -1.21
RFX5-208	ENST00000435314	SGIP1	Q9BQI5	828 aa		7.51	□□□□□ -1.21
RFX5-208	ENST00000435314	USP35	Q9P2H5	1018 aa		7.51	□□□□□ -1.21
RFX5-208	ENST00000435314	ZNF316	A6NFI3	1004 aa	Predicted RBP	7.5	□□□□□ -1.21
RFX5-208	ENST00000435314	PDE4D	Q08499	809 aa		7.5	□□□□□ -1.21
RFX5-208	ENST00000435314	RSPH4A	Q5TD94	716 aa		7.5	□□□□□ -1.21
RFX5-208	ENST00000435314	SERPINA10	Q9UK55	444 aa		7.49	□□□□□ -1.21
RFX5-208	ENST00000435314	STK24	Q9Y6E0	443 aa		7.49	□□□□□ -1.21
RFX5-208	ENST00000435314	TRIM66	O15016	1216 aa		7.48	□□□□□ -1.21
RFX5-208	ENST00000435314	BRD2	P25440	801 aa	Known RBP	7.48	□□□□□ -1.21
RFX5-208	ENST00000435314	EIF4G1	Q04637	1599 aa	Known RBP	7.48	□□□□□ -1.21
RFX5-208	ENST00000435314	RETREG2	Q8NC44	543 aa		7.48	□□□□□ -1.21
RFX5-208	ENST00000435314	FBXW7	Q969H0	707 aa		7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms