RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 POGKQ9P215 609 aa16.58■□□□□ 0.25
UBE3B-203ENST00000434735 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
UBE3B-203ENST00000434735 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
UBE3B-203ENST00000434735 EIF4G1Q04637 1599 aaKnown RBP16.57■□□□□ 0.24
UBE3B-203ENST00000434735 PPM1GO15355 546 aaPredicted RBP16.56■□□□□ 0.24
UBE3B-203ENST00000434735 TONSLQ96HA7 1378 aa16.56■□□□□ 0.24
UBE3B-203ENST00000434735 HRCP23327 699 aa16.55■□□□□ 0.24
UBE3B-203ENST00000434735 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
UBE3B-203ENST00000434735 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
UBE3B-203ENST00000434735 SALL2Q9Y467 1007 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-203ENST00000434735 SOX12O15370 315 aa16.49■□□□□ 0.23
UBE3B-203ENST00000434735 KIF27Q86VH2 1401 aa16.45■□□□□ 0.22
UBE3B-203ENST00000434735 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-203ENST00000434735 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
UBE3B-203ENST00000434735 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
UBE3B-203ENST00000434735 PAK3O75914 559 aaPredicted RBP16.39■□□□□ 0.22
UBE3B-203ENST00000434735 SAFB2Q14151 953 aaKnown RBP eCLIP16.39■□□□□ 0.22
UBE3B-203ENST00000434735 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBE3B-203ENST00000434735 MEX3CQ5U5Q3 659 aaKnown RBP16.38■□□□□ 0.21
UBE3B-203ENST00000434735 CARMIL2Q6F5E8 1435 aa16.38■□□□□ 0.21
UBE3B-203ENST00000434735 KANK1Q14678 1352 aa16.38■□□□□ 0.21
UBE3B-203ENST00000434735 CSB-PGBD3P0DP91 1061 aa16.36■□□□□ 0.21
UBE3B-203ENST00000434735 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
UBE3B-203ENST00000434735 CUX2O14529 1486 aa16.34■□□□□ 0.21
UBE3B-203ENST00000434735 STK26Q9P289 416 aa16.34■□□□□ 0.21
UBE3B-203ENST00000434735 EID1Q9Y6B2 187 aa16.34■□□□□ 0.21
UBE3B-203ENST00000434735 CCNB3Q8WWL7 1395 aa16.33■□□□□ 0.2
UBE3B-203ENST00000434735 FAM69CQ0P6D2 419 aa16.33■□□□□ 0.2
UBE3B-203ENST00000434735 CLIP1P30622 1438 aa16.32■□□□□ 0.2
UBE3B-203ENST00000434735 SOGA1O94964 1423 aa16.3■□□□□ 0.2
UBE3B-203ENST00000434735 EFCAB2Q5VUJ9 269 aa16.28■□□□□ 0.2
UBE3B-203ENST00000434735 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
UBE3B-203ENST00000434735 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
UBE3B-203ENST00000434735 FAM9BQ8IZU0 186 aa16.26■□□□□ 0.19
UBE3B-203ENST00000434735 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
UBE3B-203ENST00000434735 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-203ENST00000434735 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-203ENST00000434735 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-203ENST00000434735 CFAP53Q96M91 514 aa16.21■□□□□ 0.19
UBE3B-203ENST00000434735 KIF3BO15066 747 aa16.21■□□□□ 0.19
UBE3B-203ENST00000434735 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
UBE3B-203ENST00000434735 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
UBE3B-203ENST00000434735 JPH4Q96JJ6 628 aa16.21■□□□□ 0.19
UBE3B-203ENST00000434735 NUTM2DQ5VT03 806 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-203ENST00000434735 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
UBE3B-203ENST00000434735 KLHL34Q8N239 644 aa16.19■□□□□ 0.18
UBE3B-203ENST00000434735 MSH5O43196 834 aa16.18■□□□□ 0.18
UBE3B-203ENST00000434735 WASHC2CQ9Y4E1 1318 aa16.18■□□□□ 0.18
UBE3B-203ENST00000434735 TULP1O00294 542 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-203ENST00000434735 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-203ENST00000434735 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
UBE3B-203ENST00000434735 CEP164Q9UPV0 1460 aa16.15■□□□□ 0.18
UBE3B-203ENST00000434735 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-203ENST00000434735 GOLGA2Q08379 1002 aa16.15■□□□□ 0.18
UBE3B-203ENST00000434735 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
UBE3B-203ENST00000434735 KNSTRNQ9Y448 316 aa16.15■□□□□ 0.18
UBE3B-203ENST00000434735 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
UBE3B-203ENST00000434735 DDX10Q13206 875 aaKnown RBP16.15■□□□□ 0.18
UBE3B-203ENST00000434735 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
UBE3B-203ENST00000434735 NEUROD2Q15784 382 aa16.13■□□□□ 0.17
UBE3B-203ENST00000434735 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
UBE3B-203ENST00000434735 HSP90AA1P07900 732 aaKnown RBP16.11■□□□□ 0.17
UBE3B-203ENST00000434735 MAPK8IP3Q9UPT6 1336 aa16.1■□□□□ 0.17
UBE3B-203ENST00000434735 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
UBE3B-203ENST00000434735 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
UBE3B-203ENST00000434735 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
UBE3B-203ENST00000434735 ANP32BQ92688 251 aaKnown RBP16.09■□□□□ 0.17
UBE3B-203ENST00000434735 NUDCQ9Y266 331 aa16.08■□□□□ 0.16
UBE3B-203ENST00000434735 DCAF11Q8TEB1 546 aa16.07■□□□□ 0.16
UBE3B-203ENST00000434735 HNRNPMP52272 730 aaKnown RBP eCLIP16.07■□□□□ 0.16
UBE3B-203ENST00000434735 EVA1CP58658 441 aa16.07■□□□□ 0.16
UBE3B-203ENST00000434735 EIF4G2P78344 907 aaKnown RBP eCLIP16.07■□□□□ 0.16
UBE3B-203ENST00000434735 SENP3-EIF4A1A0A087X0R7 540 aa16.05■□□□□ 0.16
UBE3B-203ENST00000434735 ISY1Q9ULR0 285 aaKnown RBP16.04■□□□□ 0.16
UBE3B-203ENST00000434735 HNRNPUQ00839 825 aaKnown RBP eCLIP16.04■□□□□ 0.16
UBE3B-203ENST00000434735 ANP32AP39687 249 aaKnown RBP16.03■□□□□ 0.16
UBE3B-203ENST00000434735 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.03■□□□□ 0.16
UBE3B-203ENST00000434735 TAOK2Q9UL54 1235 aa16.03■□□□□ 0.16
UBE3B-203ENST00000434735 MRS2Q9HD23 443 aa16.03■□□□□ 0.16
UBE3B-203ENST00000434735 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
UBE3B-203ENST00000434735 G3V3G9 751 aa16.02■□□□□ 0.15
UBE3B-203ENST00000434735 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.15
UBE3B-203ENST00000434735 PTPRGP23470 1445 aa16.02■□□□□ 0.15
UBE3B-203ENST00000434735 UPF2Q9HAU5 1272 aaKnown RBP16.01■□□□□ 0.15
UBE3B-203ENST00000434735 CDK11BP21127 795 aaKnown RBP16.01■□□□□ 0.15
UBE3B-203ENST00000434735 PIP4K2BP78356 416 aa16■□□□□ 0.15
UBE3B-203ENST00000434735 EEA1Q15075 1411 aa16■□□□□ 0.15
UBE3B-203ENST00000434735 HDGFL2Q7Z4V5 671 aaPredicted RBP16■□□□□ 0.15
UBE3B-203ENST00000434735 LTV1Q96GA3 475 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-203ENST00000434735 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
UBE3B-203ENST00000434735 OS9Q13438 667 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-203ENST00000434735 RTF1Q92541 710 aaKnown RBP15.96■□□□□ 0.15
UBE3B-203ENST00000434735 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.15
UBE3B-203ENST00000434735 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.14
UBE3B-203ENST00000434735 GTF2E1P29083 439 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-203ENST00000434735 SF3B2Q13435 895 aaKnown RBP15.95■□□□□ 0.14
UBE3B-203ENST00000434735 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
UBE3B-203ENST00000434735 ATF3P18847 181 aa15.94■□□□□ 0.14
UBE3B-203ENST00000434735 CC2D1BQ5T0F9 858 aaKnown RBP15.94■□□□□ 0.14
UBE3B-203ENST00000434735 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms