RNA–Protein interactions for RNA: ENST00000434172.2

CKS1BP5-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 5, humanhuman

BASIC

Gene CKS1BP5, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP5-201ENST00000434172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.96□□□□□ -1.3
CKS1BP5-201ENST00000434172 MIER1Q8N108 512 aa6.96□□□□□ -1.3
CKS1BP5-201ENST00000434172 UBTFP17480 764 aaKnown RBP6.93□□□□□ -1.3
CKS1BP5-201ENST00000434172 TRIM26Q12899 539 aaPredicted RBP6.93□□□□□ -1.3
CKS1BP5-201ENST00000434172 NEUROD2Q15784 382 aa6.92□□□□□ -1.3
CKS1BP5-201ENST00000434172 POLA2Q14181 598 aa6.91□□□□□ -1.3
CKS1BP5-201ENST00000434172 RNF25Q96BH1 459 aaPredicted RBP6.91□□□□□ -1.3
CKS1BP5-201ENST00000434172 RIOK3O14730 519 aaKnown RBP6.9□□□□□ -1.3
CKS1BP5-201ENST00000434172 GSE1Q14687 1217 aa6.9□□□□□ -1.3
CKS1BP5-201ENST00000434172 RSPH6AQ9H0K4 717 aa6.88□□□□□ -1.31
CKS1BP5-201ENST00000434172 KCNV2Q8TDN2 545 aa6.86□□□□□ -1.31
CKS1BP5-201ENST00000434172 ZMYND15Q9H091 742 aa6.86□□□□□ -1.31
CKS1BP5-201ENST00000434172 STK25O00506 426 aa6.85□□□□□ -1.31
CKS1BP5-201ENST00000434172 VGFO15240 615 aaPredicted RBP6.85□□□□□ -1.31
CKS1BP5-201ENST00000434172 ZC3H15Q8WU90 426 aaKnown RBP6.85□□□□□ -1.31
CKS1BP5-201ENST00000434172 ZNF692Q9BU19 519 aaPredicted RBP6.85□□□□□ -1.31
CKS1BP5-201ENST00000434172 WDR70Q9NW82 654 aa6.85□□□□□ -1.31
CKS1BP5-201ENST00000434172 TRHP20396 242 aaPredicted RBP6.84□□□□□ -1.31
CKS1BP5-201ENST00000434172 HRCP23327 699 aa6.84□□□□□ -1.31
CKS1BP5-201ENST00000434172 SSUH2Q9Y2M2 353 aa6.83□□□□□ -1.32
CKS1BP5-201ENST00000434172 SPDYE2BA6NHP3 402 aa6.82□□□□□ -1.32
CKS1BP5-201ENST00000434172 SPDYE6P0CI01 402 aa6.82□□□□□ -1.32
CKS1BP5-201ENST00000434172 SPDYE2Q495Y8 402 aa6.82□□□□□ -1.32
CKS1BP5-201ENST00000434172 SGIP1Q9BQI5 828 aa6.82□□□□□ -1.32
CKS1BP5-201ENST00000434172 CCDC9Q9Y3X0 531 aaKnown RBP6.82□□□□□ -1.32
CKS1BP5-201ENST00000434172 SLC24A3Q9HC58 644 aa6.79□□□□□ -1.32
CKS1BP5-201ENST00000434172 ZBTB7CA1YPR0 619 aa6.78□□□□□ -1.32
CKS1BP5-201ENST00000434172 ARHGEF1Q92888 912 aaKnown RBP6.78□□□□□ -1.32
CKS1BP5-201ENST00000434172 PABPN1Q86U42 306 aaKnown RBP eCLIP6.77□□□□□ -1.33
CKS1BP5-201ENST00000434172 BCL11BQ9C0K0 894 aaPredicted RBP6.75□□□□□ -1.33
CKS1BP5-201ENST00000434172 STK24Q9Y6E0 443 aa6.75□□□□□ -1.33
CKS1BP5-201ENST00000434172 ZMYND10O75800 440 aa6.74□□□□□ -1.33
CKS1BP5-201ENST00000434172 CHRM1P11229 460 aaPredicted RBP6.74□□□□□ -1.33
CKS1BP5-201ENST00000434172 SPINK5Q9NQ38 1064 aaPredicted RBP6.74□□□□□ -1.33
CKS1BP5-201ENST00000434172 TESPA1A2RU30 521 aaPredicted RBP6.73□□□□□ -1.33
CKS1BP5-201ENST00000434172 PDIA4P13667 645 aaKnown RBP6.73□□□□□ -1.33
CKS1BP5-201ENST00000434172 NUBP1P53384 320 aa6.72□□□□□ -1.33
CKS1BP5-201ENST00000434172 CAPN15O75808 1086 aa6.71□□□□□ -1.34
CKS1BP5-201ENST00000434172 SMYD5Q6GMV2 418 aa6.71□□□□□ -1.34
CKS1BP5-201ENST00000434172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.7□□□□□ -1.34
CKS1BP5-201ENST00000434172 DCAF8Q5TAQ9 597 aa6.7□□□□□ -1.34
CKS1BP5-201ENST00000434172 FAM212AQ96EL1 285 aa6.7□□□□□ -1.34
CKS1BP5-201ENST00000434172 ZFP91Q96JP5 570 aaPredicted RBP6.7□□□□□ -1.34
CKS1BP5-201ENST00000434172 ARID3AQ99856 593 aa6.7□□□□□ -1.34
CKS1BP5-201ENST00000434172 BARGINQ6ZT62 677 aa6.69□□□□□ -1.34
CKS1BP5-201ENST00000434172 CADPS2Q86UW7 1296 aa6.69□□□□□ -1.34
CKS1BP5-201ENST00000434172 AK7Q96M32 723 aa6.68□□□□□ -1.34
CKS1BP5-201ENST00000434172 C1orf115Q9H7X2 142 aa6.68□□□□□ -1.34
CKS1BP5-201ENST00000434172 E2F4Q16254 413 aa6.66□□□□□ -1.34
CKS1BP5-201ENST00000434172 OSCARQ8IYS5 282 aa6.66□□□□□ -1.34
CKS1BP5-201ENST00000434172 SEMA3EO15041 775 aa6.65□□□□□ -1.34
CKS1BP5-201ENST00000434172 FLIIQ13045 1269 aa6.64□□□□□ -1.35
CKS1BP5-201ENST00000434172 APBB1O00213 710 aa6.63□□□□□ -1.35
CKS1BP5-201ENST00000434172 KDM4CQ9H3R0 1056 aa6.63□□□□□ -1.35
CKS1BP5-201ENST00000434172 IL27Q8NEV9 243 aa6.62□□□□□ -1.35
CKS1BP5-201ENST00000434172 GPBP1L1Q9HC44 474 aaPredicted RBP6.62□□□□□ -1.35
CKS1BP5-201ENST00000434172 ABCB7O75027 752 aa6.61□□□□□ -1.35
CKS1BP5-201ENST00000434172 MKRN3Q13064 507 aaKnown RBP6.59□□□□□ -1.35
CKS1BP5-201ENST00000434172 KCTD17Q8N5Z5 321 aa6.59□□□□□ -1.35
CKS1BP5-201ENST00000434172 NECTIN2Q92692 538 aa6.58□□□□□ -1.36
CKS1BP5-201ENST00000434172 ARIH1Q9Y4X5 557 aaPredicted RBP6.58□□□□□ -1.36
CKS1BP5-201ENST00000434172 ARID3CA6NKF2 412 aa6.57□□□□□ -1.36
CKS1BP5-201ENST00000434172 A6NJR5 290 aa6.56□□□□□ -1.36
CKS1BP5-201ENST00000434172 KRI1Q8N9T8 703 aaKnown RBP6.56□□□□□ -1.36
CKS1BP5-201ENST00000434172 TRAIPQ9BWF2 469 aa6.56□□□□□ -1.36
CKS1BP5-201ENST00000434172 PDE4DQ08499 809 aa6.55□□□□□ -1.36
CKS1BP5-201ENST00000434172 GPIHBP1Q8IV16 184 aa6.55□□□□□ -1.36
CKS1BP5-201ENST00000434172 CCDC82Q8N4S0 544 aa6.55□□□□□ -1.36
CKS1BP5-201ENST00000434172 TRIM66O15016 1216 aa6.54□□□□□ -1.36
CKS1BP5-201ENST00000434172 DDRGK1Q96HY6 314 aa6.54□□□□□ -1.36
CKS1BP5-201ENST00000434172 C1QBPQ07021 282 aaKnown RBP6.52□□□□□ -1.37
CKS1BP5-201ENST00000434172 ZNF467Q7Z7K2 595 aaPredicted RBP6.52□□□□□ -1.37
CKS1BP5-201ENST00000434172 RNF39Q9H2S5 420 aa6.52□□□□□ -1.37
CKS1BP5-201ENST00000434172 ZNF316A6NFI3 1004 aaPredicted RBP6.51□□□□□ -1.37
CKS1BP5-201ENST00000434172 TRAK2O60296 914 aa6.51□□□□□ -1.37
CKS1BP5-201ENST00000434172 MFRPQ9BY79 579 aa6.51□□□□□ -1.37
CKS1BP5-201ENST00000434172 GOPCQ9HD26 462 aa6.51□□□□□ -1.37
CKS1BP5-201ENST00000434172 PYGBP11216 843 aa6.5□□□□□ -1.37
CKS1BP5-201ENST00000434172 PDAP1Q13442 181 aaKnown RBP6.5□□□□□ -1.37
CKS1BP5-201ENST00000434172 RASEFQ8IZ41 740 aa6.5□□□□□ -1.37
CKS1BP5-201ENST00000434172 RAD21O60216 631 aa6.49□□□□□ -1.37
CKS1BP5-201ENST00000434172 ONECUT3O60422 494 aaPredicted RBP6.49□□□□□ -1.37
CKS1BP5-201ENST00000434172 PELP1Q8IZL8 1130 aaKnown RBP6.49□□□□□ -1.37
CKS1BP5-201ENST00000434172 MNX1P50219 401 aaPredicted RBP6.48□□□□□ -1.37
CKS1BP5-201ENST00000434172 FAM117AQ9C073 453 aa6.48□□□□□ -1.37
CKS1BP5-201ENST00000434172 MFSD10Q14728 455 aa6.47□□□□□ -1.37
CKS1BP5-201ENST00000434172 TMCO4Q5TGY1 634 aa6.47□□□□□ -1.37
CKS1BP5-201ENST00000434172 RGS22Q8NE09 1264 aa6.46□□□□□ -1.38
CKS1BP5-201ENST00000434172 SERPINA10Q9UK55 444 aa6.46□□□□□ -1.38
CKS1BP5-201ENST00000434172 PLEKHG3A1L390 1219 aa6.45□□□□□ -1.38
CKS1BP5-201ENST00000434172 HMGB1P09429 215 aaKnown RBP6.45□□□□□ -1.38
CKS1BP5-201ENST00000434172 PDE4AP27815 886 aa6.45□□□□□ -1.38
CKS1BP5-201ENST00000434172 RBM26Q5T8P6 1007 aaKnown RBP6.45□□□□□ -1.38
CKS1BP5-201ENST00000434172 SHROOM4Q9ULL8 1493 aa6.45□□□□□ -1.38
CKS1BP5-201ENST00000434172 NLRP6P59044 892 aa6.44□□□□□ -1.38
CKS1BP5-201ENST00000434172 MYT1Q01538 1121 aa6.44□□□□□ -1.38
CKS1BP5-201ENST00000434172 CAMK2BQ13554 666 aa6.44□□□□□ -1.38
CKS1BP5-201ENST00000434172 CCDC97Q96F63 343 aaPredicted RBP6.44□□□□□ -1.38
CKS1BP5-201ENST00000434172 CREBZFQ9NS37 354 aa6.44□□□□□ -1.38
CKS1BP5-201ENST00000434172 DSG3P32926 999 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms