RNA–Protein interactions for RNA: ENST00000433666.5

CUBN-203, Transcript of cubilin, humanhuman

TSL 5

Gene CUBN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-203ENST00000433666 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
CUBN-203ENST00000433666 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
CUBN-203ENST00000433666 ASTLQ6HA08 431 aaPredicted RBP13.25□□□□□ -0.29
CUBN-203ENST00000433666 ATMINO43313 823 aaPredicted RBP13.23□□□□□ -0.29
CUBN-203ENST00000433666 C7P10643 843 aa13.19□□□□□ -0.3
CUBN-203ENST00000433666 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
CUBN-203ENST00000433666 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
CUBN-203ENST00000433666 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
CUBN-203ENST00000433666 LCE2DQ5TA82 110 aaPredicted RBP13.12□□□□□ -0.31
CUBN-203ENST00000433666 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
CUBN-203ENST00000433666 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
CUBN-203ENST00000433666 PCDH10Q9P2E7 1040 aa13.09□□□□□ -0.31
CUBN-203ENST00000433666 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
CUBN-203ENST00000433666 CCDC61Q9Y6R9 512 aa13.07□□□□□ -0.32
CUBN-203ENST00000433666 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
CUBN-203ENST00000433666 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
CUBN-203ENST00000433666 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
CUBN-203ENST00000433666 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
CUBN-203ENST00000433666 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
CUBN-203ENST00000433666 SCUBE2Q9NQ36 999 aa13.01□□□□□ -0.33
CUBN-203ENST00000433666 BMP2KQ9NSY1 1161 aaPredicted RBP13□□□□□ -0.33
CUBN-203ENST00000433666 PROM2Q8N271 834 aa12.96□□□□□ -0.33
CUBN-203ENST00000433666 MAP3K13O43283 966 aa12.94□□□□□ -0.34
CUBN-203ENST00000433666 COLQQ9Y215 455 aaPredicted RBP12.9□□□□□ -0.34
CUBN-203ENST00000433666 TIE1P35590 1138 aa12.89□□□□□ -0.35
CUBN-203ENST00000433666 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
CUBN-203ENST00000433666 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
CUBN-203ENST00000433666 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.36
CUBN-203ENST00000433666 SEC24BO95487 1268 aa12.82□□□□□ -0.36
CUBN-203ENST00000433666 MIER1Q8N108 512 aa12.82□□□□□ -0.36
CUBN-203ENST00000433666 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
CUBN-203ENST00000433666 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
CUBN-203ENST00000433666 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
CUBN-203ENST00000433666 PCDHB13Q9Y5F0 798 aa12.72□□□□□ -0.37
CUBN-203ENST00000433666 IER5LQ5T953 404 aa12.71□□□□□ -0.37
CUBN-203ENST00000433666 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
CUBN-203ENST00000433666 ST18O60284 1047 aa12.68□□□□□ -0.38
CUBN-203ENST00000433666 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
CUBN-203ENST00000433666 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
CUBN-203ENST00000433666 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
CUBN-203ENST00000433666 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
CUBN-203ENST00000433666 NUBP1P53384 320 aa12.63□□□□□ -0.39
CUBN-203ENST00000433666 DCAF8L2P0C7V8 631 aa12.61□□□□□ -0.39
CUBN-203ENST00000433666 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
CUBN-203ENST00000433666 NACADO15069 1562 aa12.6□□□□□ -0.39
CUBN-203ENST00000433666 PLCG2P16885 1265 aa12.57□□□□□ -0.4
CUBN-203ENST00000433666 IRX5P78411 483 aaPredicted RBP12.55□□□□□ -0.4
CUBN-203ENST00000433666 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
CUBN-203ENST00000433666 MMRN1Q13201 1228 aa12.5□□□□□ -0.41
CUBN-203ENST00000433666 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
CUBN-203ENST00000433666 SPNS2Q8IVW8 549 aa12.49□□□□□ -0.41
CUBN-203ENST00000433666 OCEL1Q9H607 264 aa12.47□□□□□ -0.41
CUBN-203ENST00000433666 MARVELD3Q96A59 401 aa12.45□□□□□ -0.42
CUBN-203ENST00000433666 TMEM121BQ9BXQ6 578 aaPredicted RBP12.44□□□□□ -0.42
CUBN-203ENST00000433666 ABCC9O60706 1549 aa12.43□□□□□ -0.42
CUBN-203ENST00000433666 RB1CC1Q8TDY2 1594 aa12.41□□□□□ -0.42
CUBN-203ENST00000433666 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.41□□□□□ -0.42
CUBN-203ENST00000433666 PYGBP11216 843 aa12.4□□□□□ -0.42
CUBN-203ENST00000433666 SNPHO15079 494 aa12.39□□□□□ -0.43
CUBN-203ENST00000433666 PCDHB8Q9UN66 801 aa12.39□□□□□ -0.43
CUBN-203ENST00000433666 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
CUBN-203ENST00000433666 SCRIBQ14160 1630 aa12.34□□□□□ -0.43
CUBN-203ENST00000433666 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
CUBN-203ENST00000433666 PDCD7Q8N8D1 485 aaKnown RBP12.31□□□□□ -0.44
CUBN-203ENST00000433666 POTEB3A0JP26 581 aa12.27□□□□□ -0.45
CUBN-203ENST00000433666 EMP3P54852 163 aa12.27□□□□□ -0.45
CUBN-203ENST00000433666 POTEBQ6S5H4 581 aa12.27□□□□□ -0.45
CUBN-203ENST00000433666 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
CUBN-203ENST00000433666 KRTAP3-3Q9BYR6 98 aa12.23□□□□□ -0.45
CUBN-203ENST00000433666 KRTAP3-2Q9BYR7 98 aa12.23□□□□□ -0.45
CUBN-203ENST00000433666 FKBP8Q14318 412 aa12.22□□□□□ -0.45
CUBN-203ENST00000433666 HS3ST6Q96QI5 342 aa12.21□□□□□ -0.45
CUBN-203ENST00000433666 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
CUBN-203ENST00000433666 L3MBTL3Q96JM7 780 aaPredicted RBP12.2□□□□□ -0.46
CUBN-203ENST00000433666 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
CUBN-203ENST00000433666 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
CUBN-203ENST00000433666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
CUBN-203ENST00000433666 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
CUBN-203ENST00000433666 RSF1Q96T23 1441 aaPredicted RBP12.13□□□□□ -0.47
CUBN-203ENST00000433666 PSEN1P49768 467 aa12.11□□□□□ -0.47
CUBN-203ENST00000433666 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
CUBN-203ENST00000433666 GSE1Q14687 1217 aa12.09□□□□□ -0.47
CUBN-203ENST00000433666 BAZ1AQ9NRL2 1556 aaPredicted RBP12.08□□□□□ -0.48
CUBN-203ENST00000433666 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
CUBN-203ENST00000433666 CHRM1P11229 460 aaPredicted RBP12.06□□□□□ -0.48
CUBN-203ENST00000433666 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
CUBN-203ENST00000433666 HOXB3P14651 431 aaPredicted RBP12.05□□□□□ -0.48
CUBN-203ENST00000433666 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
CUBN-203ENST00000433666 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
CUBN-203ENST00000433666 BOLA1Q9Y3E2 137 aa11.99□□□□□ -0.49
CUBN-203ENST00000433666 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
CUBN-203ENST00000433666 CECR2Q9BXF3 1484 aa11.97□□□□□ -0.49
CUBN-203ENST00000433666 HOXB1P14653 301 aaPredicted RBP11.97□□□□□ -0.49
CUBN-203ENST00000433666 VASPP50552 380 aaPredicted RBP11.97□□□□□ -0.49
CUBN-203ENST00000433666 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
CUBN-203ENST00000433666 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.49
CUBN-203ENST00000433666 G3V3G9 751 aa11.94□□□□□ -0.5
CUBN-203ENST00000433666 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
CUBN-203ENST00000433666 ERBB3P21860 1342 aa11.93□□□□□ -0.5
CUBN-203ENST00000433666 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms