RNA–Protein interactions for RNA: ENST00000432827.1

LCNL1-202, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-202ENST00000432827 ADAMTS12P58397 1594 aa40.28■■■■■ 4.04
LCNL1-202ENST00000432827 EFCAB5A4FU69 1503 aa40.27■■■■■ 4.04
LCNL1-202ENST00000432827 ZNF608Q9ULD9 1512 aaPredicted RBP40.23■■■■■ 4.03
LCNL1-202ENST00000432827 HRCP23327 699 aa40.21■■■■■ 4.03
LCNL1-202ENST00000432827 EIF4G3O43432 1585 aaKnown RBP40.17■■■■■ 4.02
LCNL1-202ENST00000432827 DNAJC5Q9H3Z4 198 aa40.13■■■■■ 4.02
LCNL1-202ENST00000432827 MAP3K1Q13233 1512 aa40.04■■■■■ 4
LCNL1-202ENST00000432827 SAMD9Q5K651 1589 aa40.02■■■■■ 4
LCNL1-202ENST00000432827 TTBK1Q5TCY1 1321 aaPredicted RBP40.01■■■■■ 4
LCNL1-202ENST00000432827 MAGI1Q96QZ7 1491 aaPredicted RBP40■■■■□ 3.99
LCNL1-202ENST00000432827 SNAPC4Q5SXM2 1469 aa39.99■■■■□ 3.99
LCNL1-202ENST00000432827 FHOD3Q2V2M9 1422 aa39.92■■■■□ 3.98
LCNL1-202ENST00000432827 IQGAP2Q13576 1575 aa39.91■■■■□ 3.98
LCNL1-202ENST00000432827 FMN1Q68DA7 1419 aa39.88■■■■□ 3.97
LCNL1-202ENST00000432827 TIAM1Q13009 1591 aa39.86■■■■□ 3.97
LCNL1-202ENST00000432827 FYCO1Q9BQS8 1478 aa39.86■■■■□ 3.97
LCNL1-202ENST00000432827 PCF11O94913 1555 aaKnown RBP39.86■■■■□ 3.97
LCNL1-202ENST00000432827 GRIN2AQ12879 1464 aa39.85■■■■□ 3.97
LCNL1-202ENST00000432827 CASKIN1Q8WXD9 1431 aa39.83■■■■□ 3.97
LCNL1-202ENST00000432827 SYNJ2O15056 1496 aa39.81■■■■□ 3.96
LCNL1-202ENST00000432827 P3H3Q8IVL6 736 aa39.81■■■■□ 3.96
LCNL1-202ENST00000432827 CFAP43Q8NDM7 1665 aa39.79■■■■□ 3.96
LCNL1-202ENST00000432827 KIAA0586Q9BVV6 1533 aa39.78■■■■□ 3.96
LCNL1-202ENST00000432827 KANK4Q5T7N3 995 aaPredicted RBP39.77■■■■□ 3.96
LCNL1-202ENST00000432827 UGGT2Q9NYU1 1516 aa39.75■■■■□ 3.95
LCNL1-202ENST00000432827 ZEB1P37275 1124 aaPredicted RBP39.68■■■■□ 3.94
LCNL1-202ENST00000432827 LRRC9Q6ZRR7 1453 aa39.66■■■■□ 3.94
LCNL1-202ENST00000432827 CHMP7Q8WUX9 453 aaPredicted RBP39.63■■■■□ 3.93
LCNL1-202ENST00000432827 RRBP1Q9P2E9 1410 aaKnown RBP39.58■■■■□ 3.93
LCNL1-202ENST00000432827 NUP160Q12769 1436 aa39.56■■■■□ 3.92
LCNL1-202ENST00000432827 CEP170Q5SW79 1584 aa39.56■■■■□ 3.92
LCNL1-202ENST00000432827 KIAA0556O60303 1618 aa39.49■■■■□ 3.91
LCNL1-202ENST00000432827 ATP1B4Q9UN42 357 aaPredicted RBP39.46■■■■□ 3.91
LCNL1-202ENST00000432827 DISP1Q96F81 1524 aa39.46■■■■□ 3.91
LCNL1-202ENST00000432827 HECW1Q76N89 1606 aa39.42■■■■□ 3.9
LCNL1-202ENST00000432827 CCDC18Q5T9S5 1454 aa39.41■■■■□ 3.9
LCNL1-202ENST00000432827 LRRIQ1Q96JM4 1722 aa39.41■■■■□ 3.9
LCNL1-202ENST00000432827 CCNB3Q8WWL7 1395 aa39.39■■■■□ 3.9
LCNL1-202ENST00000432827 FBLN2P98095 1184 aa39.39■■■■□ 3.9
LCNL1-202ENST00000432827 HNRNPUL2Q1KMD3 747 aaKnown RBP39.33■■■■□ 3.89
LCNL1-202ENST00000432827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.29■■■■□ 3.88
LCNL1-202ENST00000432827 CCER1Q8TC90 406 aaPredicted RBP39.29■■■■□ 3.88
LCNL1-202ENST00000432827 CARMIL2Q6F5E8 1435 aa39.26■■■■□ 3.88
LCNL1-202ENST00000432827 EHBP1L1Q8N3D4 1523 aa39.26■■■■□ 3.88
LCNL1-202ENST00000432827 PHLDB1Q86UU1 1377 aa39.26■■■■□ 3.88
LCNL1-202ENST00000432827 MTUS2Q5JR59 1369 aa39.25■■■■□ 3.87
LCNL1-202ENST00000432827 CHD1O14646 1710 aa39.23■■■■□ 3.87
LCNL1-202ENST00000432827 JPH4Q96JJ6 628 aa39.22■■■■□ 3.87
LCNL1-202ENST00000432827 EPRSP07814 1512 aaKnown RBP39.22■■■■□ 3.87
LCNL1-202ENST00000432827 RAPGEF6Q8TEU7 1601 aa39.17■■■■□ 3.86
LCNL1-202ENST00000432827 SUPT6HQ7KZ85 1726 aaKnown RBP39.17■■■■□ 3.86
LCNL1-202ENST00000432827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.15■■■■□ 3.86
LCNL1-202ENST00000432827 NCOA2Q15596 1464 aa39.07■■■■□ 3.84
LCNL1-202ENST00000432827 ARHGEF11O15085 1522 aa39.06■■■■□ 3.84
LCNL1-202ENST00000432827 MAGI3Q5TCQ9 1506 aa39.05■■■■□ 3.84
LCNL1-202ENST00000432827 NUP153P49790 1475 aaKnown RBP39.05■■■■□ 3.84
LCNL1-202ENST00000432827 CDK13Q14004 1512 aaKnown RBP39.02■■■■□ 3.84
LCNL1-202ENST00000432827 FGD6Q6ZV73 1430 aa39.01■■■■□ 3.84
LCNL1-202ENST00000432827 SHROOM2Q13796 1616 aa38.99■■■■□ 3.83
LCNL1-202ENST00000432827 MYOM3Q5VTT5 1437 aa38.98■■■■□ 3.83
LCNL1-202ENST00000432827 PRG4Q92954 1404 aaPredicted RBP38.93■■■■□ 3.82
LCNL1-202ENST00000432827 ABCA8O94911 1581 aa38.91■■■■□ 3.82
LCNL1-202ENST00000432827 PLB1Q6P1J6 1458 aa38.9■■■■□ 3.82
LCNL1-202ENST00000432827 FAM50AQ14320 339 aaKnown RBP38.89■■■■□ 3.82
LCNL1-202ENST00000432827 CDK11AQ9UQ88 783 aaPredicted RBP38.88■■■■□ 3.81
LCNL1-202ENST00000432827 CLASP1Q7Z460 1538 aa38.81■■■■□ 3.8
LCNL1-202ENST00000432827 ITGAEP38570 1179 aa38.8■■■■□ 3.8
LCNL1-202ENST00000432827 CLSPNQ9HAW4 1339 aa38.79■■■■□ 3.8
LCNL1-202ENST00000432827 PTPN23Q9H3S7 1636 aa38.78■■■■□ 3.8
LCNL1-202ENST00000432827 MIA2Q96PC5 1412 aa38.78■■■■□ 3.8
LCNL1-202ENST00000432827 TCOF1Q13428 1488 aaKnown RBP38.77■■■■□ 3.8
LCNL1-202ENST00000432827 PTPRGP23470 1445 aa38.77■■■■□ 3.8
LCNL1-202ENST00000432827 TROQ12816 1431 aaPredicted RBP38.74■■■■□ 3.79
LCNL1-202ENST00000432827 SETD5Q9C0A6 1442 aa38.74■■■■□ 3.79
LCNL1-202ENST00000432827 ARID3CA6NKF2 412 aa38.71■■■■□ 3.79
LCNL1-202ENST00000432827 ADCY10Q96PN6 1610 aa38.71■■■■□ 3.79
LCNL1-202ENST00000432827 DHX57Q6P158 1386 aaKnown RBP38.71■■■■□ 3.79
LCNL1-202ENST00000432827 RAB3GAP2Q9H2M9 1393 aa38.67■■■■□ 3.78
LCNL1-202ENST00000432827 ATP10BO94823 1461 aa38.63■■■■□ 3.77
LCNL1-202ENST00000432827 UACAQ9BZF9 1416 aa38.58■■■■□ 3.77
LCNL1-202ENST00000432827 ITSN2Q9NZM3 1697 aa38.56■■■■□ 3.76
LCNL1-202ENST00000432827 ERCC6L2Q5T890 1561 aa38.53■■■■□ 3.76
LCNL1-202ENST00000432827 PLEKHD1A6NEE1 506 aa38.52■■■■□ 3.76
LCNL1-202ENST00000432827 HFM1A2PYH4 1435 aa38.51■■■■□ 3.76
LCNL1-202ENST00000432827 PTPRKQ15262 1439 aa38.51■■■■□ 3.76
LCNL1-202ENST00000432827 KIF14Q15058 1648 aa38.48■■■■□ 3.75
LCNL1-202ENST00000432827 ABCC2Q92887 1545 aa38.47■■■■□ 3.75
LCNL1-202ENST00000432827 AKNAQ7Z591 1439 aa38.45■■■■□ 3.75
LCNL1-202ENST00000432827 GPATCH8Q9UKJ3 1502 aaKnown RBP38.41■■■■□ 3.74
LCNL1-202ENST00000432827 UHRF1BP1LA0JNW5 1464 aa38.39■■■■□ 3.74
LCNL1-202ENST00000432827 ABCC10Q5T3U5 1492 aa38.38■■■■□ 3.73
LCNL1-202ENST00000432827 DNMT1P26358 1616 aaKnown RBP38.37■■■■□ 3.73
LCNL1-202ENST00000432827 NAIPQ13075 1403 aa38.37■■■■□ 3.73
LCNL1-202ENST00000432827 GCC2Q8IWJ2 1684 aa38.35■■■■□ 3.73
LCNL1-202ENST00000432827 CDC42BPAQ5VT25 1732 aa38.3■■■■□ 3.72
LCNL1-202ENST00000432827 DAPK1P53355 1430 aa38.3■■■■□ 3.72
LCNL1-202ENST00000432827 CFDP1Q9UEE9 299 aaPredicted RBP38.3■■■■□ 3.72
LCNL1-202ENST00000432827 MAPKBP1O60336 1514 aa38.29■■■■□ 3.72
LCNL1-202ENST00000432827 CAMSAP2Q08AD1 1489 aa38.29■■■■□ 3.72
LCNL1-202ENST00000432827 ROCK1Q13464 1354 aa38.27■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms