RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 PNNQ9H307 717 aaKnown RBP7.97□□□□□ -1.13
UBR3-204ENST00000430321 PPARGC1BQ86YN6 1023 aaKnown RBP7.96□□□□□ -1.14
UBR3-204ENST00000430321 CFAP53Q96M91 514 aa7.96□□□□□ -1.14
UBR3-204ENST00000430321 CHMP4AQ9BY43 222 aa7.96□□□□□ -1.14
UBR3-204ENST00000430321 KCNH8Q96L42 1107 aa7.95□□□□□ -1.14
UBR3-204ENST00000430321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.95□□□□□ -1.143e-6■■■□□ 14.9
UBR3-204ENST00000430321 CFDP1Q9UEE9 299 aaPredicted RBP7.95□□□□□ -1.14
UBR3-204ENST00000430321 AEBP2Q6ZN18 517 aaPredicted RBP7.94□□□□□ -1.14
UBR3-204ENST00000430321 CCNB3Q8WWL7 1395 aa7.93□□□□□ -1.14
UBR3-204ENST00000430321 RSPH4AQ5TD94 716 aa7.93□□□□□ -1.14
UBR3-204ENST00000430321 CHMP4BQ9H444 224 aaKnown RBP7.93□□□□□ -1.14
UBR3-204ENST00000430321 MYH16Q9H6N6 1097 aa7.92□□□□□ -1.14
UBR3-204ENST00000430321 WDR43Q15061 677 aaKnown RBP eCLIP7.91□□□□□ -1.14
UBR3-204ENST00000430321 HMGB2P26583 209 aaKnown RBP7.9□□□□□ -1.14
UBR3-204ENST00000430321 RTL5Q5HYW3 569 aaPredicted RBP7.9□□□□□ -1.14
UBR3-204ENST00000430321 EFCAB2Q5VUJ9 269 aa7.89□□□□□ -1.15
UBR3-204ENST00000430321 CADPSQ9ULU8 1353 aa7.89□□□□□ -1.15
UBR3-204ENST00000430321 EIF4G1Q04637 1599 aaKnown RBP7.89□□□□□ -1.15
UBR3-204ENST00000430321 LOC105371045A0A1W2PR82 267 aa7.89□□□□□ -1.15
UBR3-204ENST00000430321 UPF2Q9HAU5 1272 aaKnown RBP7.89□□□□□ -1.15
UBR3-204ENST00000430321 OSCARQ8IYS5 282 aa7.88□□□□□ -1.15
UBR3-204ENST00000430321 EID1Q9Y6B2 187 aa7.88□□□□□ -1.15
UBR3-204ENST00000430321 ANO8Q9HCE9 1232 aaPredicted RBP7.88□□□□□ -1.15
UBR3-204ENST00000430321 SOGA1O94964 1423 aa7.88□□□□□ -1.15
UBR3-204ENST00000430321 FMN1Q68DA7 1419 aa7.88□□□□□ -1.15
UBR3-204ENST00000430321 CARMIL1Q5VZK9 1371 aa7.88□□□□□ -1.15
UBR3-204ENST00000430321 NUDCQ9Y266 331 aa7.87□□□□□ -1.15
UBR3-204ENST00000430321 CUX2O14529 1486 aa7.87□□□□□ -1.15
UBR3-204ENST00000430321 POGKQ9P215 609 aa7.87□□□□□ -1.15
UBR3-204ENST00000430321 CNGB1Q14028 1251 aaPredicted RBP7.87□□□□□ -1.15
UBR3-204ENST00000430321 TMX4Q9H1E5 349 aaPredicted RBP7.87□□□□□ -1.15
UBR3-204ENST00000430321 CDK11BP21127 795 aaKnown RBP7.86□□□□□ -1.15
UBR3-204ENST00000430321 DCAF8L1A6NGE4 600 aa7.86□□□□□ -1.15
UBR3-204ENST00000430321 HRCP23327 699 aa7.85□□□□□ -1.15
UBR3-204ENST00000430321 TOP2AP11388 1531 aaKnown RBP7.85□□□□□ -1.15
UBR3-204ENST00000430321 A0A0G2JS52 829 aa7.85□□□□□ -1.15
UBR3-204ENST00000430321 MS4A1P11836 297 aa7.84□□□□□ -1.16
UBR3-204ENST00000430321 NPHP1O15259 732 aa7.83□□□□□ -1.16
UBR3-204ENST00000430321 TNIKQ9UKE5 1360 aa7.83□□□□□ -1.16
UBR3-204ENST00000430321 EIF3AQ14152 1382 aaKnown RBP7.81□□□□□ -1.16
UBR3-204ENST00000430321 UACAQ9BZF9 1416 aa7.81□□□□□ -1.16
UBR3-204ENST00000430321 ZBTB7CA1YPR0 619 aa7.8□□□□□ -1.16
UBR3-204ENST00000430321 ANP32BQ92688 251 aaKnown RBP7.8□□□□□ -1.16
UBR3-204ENST00000430321 DIEXFQ68CQ4 756 aaKnown RBP7.8□□□□□ -1.16
UBR3-204ENST00000430321 CFAP44Q96MT7 982 aa7.8□□□□□ -1.16
UBR3-204ENST00000430321 CCDC18Q5T9S5 1454 aa7.8□□□□□ -1.16
UBR3-204ENST00000430321 CHIC2Q9UKJ5 165 aa7.8□□□□□ -1.16
UBR3-204ENST00000430321 HDAC5Q9UQL6 1122 aa7.8□□□□□ -1.16
UBR3-204ENST00000430321 MAPK8IP3Q9UPT6 1336 aa7.79□□□□□ -1.16
UBR3-204ENST00000430321 TMC1Q8TDI8 760 aa7.78□□□□□ -1.16
UBR3-204ENST00000430321 ANKRD30AQ9BXX3 1397 aa7.78□□□□□ -1.16
UBR3-204ENST00000430321 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
UBR3-204ENST00000430321 KNSTRNQ9Y448 316 aa7.78□□□□□ -1.16
UBR3-204ENST00000430321 CASC1Q6TDU7 716 aa7.78□□□□□ -1.16
UBR3-204ENST00000430321 HDGFL2Q7Z4V5 671 aaPredicted RBP7.77□□□□□ -1.16
UBR3-204ENST00000430321 CALD1Q05682 793 aaKnown RBP7.77□□□□□ -1.17
UBR3-204ENST00000430321 TIMELESSQ9UNS1 1208 aa7.77□□□□□ -1.17
UBR3-204ENST00000430321 ARHGAP35Q9NRY4 1499 aa7.76□□□□□ -1.17
UBR3-204ENST00000430321 ATAD2BQ9ULI0 1458 aa7.76□□□□□ -1.17
UBR3-204ENST00000430321 FANCD2Q9BXW9 1451 aa7.76□□□□□ -1.17
UBR3-204ENST00000430321 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBR3-204ENST00000430321 RAPGEF2Q9Y4G8 1499 aa7.75□□□□□ -1.17
UBR3-204ENST00000430321 HSP90AA1P07900 732 aaKnown RBP7.75□□□□□ -1.17
UBR3-204ENST00000430321 GOLGA2Q08379 1002 aa7.74□□□□□ -1.17
UBR3-204ENST00000430321 SMARCA4P51532 1647 aa7.74□□□□□ -1.17
UBR3-204ENST00000430321 LMOD2Q6P5Q4 547 aa7.74□□□□□ -1.17
UBR3-204ENST00000430321 POGZQ7Z3K3 1410 aa7.74□□□□□ -1.17
UBR3-204ENST00000430321 TMF1P82094 1093 aa7.73□□□□□ -1.17
UBR3-204ENST00000430321 KDM2AQ9Y2K7 1162 aa7.73□□□□□ -1.17
UBR3-204ENST00000430321 PTPRGP23470 1445 aa7.73□□□□□ -1.17
UBR3-204ENST00000430321 SPAG9O60271 1321 aaKnown RBP7.72□□□□□ -1.17
UBR3-204ENST00000430321 ANP32AP39687 249 aaKnown RBP7.72□□□□□ -1.17
UBR3-204ENST00000430321 STAC3Q96MF2 364 aa7.72□□□□□ -1.17
UBR3-204ENST00000430321 NCAPD3P42695 1498 aa7.72□□□□□ -1.17
UBR3-204ENST00000430321 MRC2Q9UBG0 1479 aa7.72□□□□□ -1.17
UBR3-204ENST00000430321 SETD5Q9C0A6 1442 aa7.72□□□□□ -1.17
UBR3-204ENST00000430321 IFT140Q96RY7 1462 aa7.71□□□□□ -1.17
UBR3-204ENST00000430321 CCDC88BA6NC98 1476 aa7.71□□□□□ -1.18
UBR3-204ENST00000430321 RRP7BPQ9NSQ0 103 aa7.7□□□□□ -1.18
UBR3-204ENST00000430321 MLECQ14165 292 aa7.7□□□□□ -1.18
UBR3-204ENST00000430321 CARD11Q9BXL7 1154 aa7.69□□□□□ -1.18
UBR3-204ENST00000430321 WWC1Q8IX03 1113 aa7.69□□□□□ -1.18
UBR3-204ENST00000430321 RTF1Q92541 710 aaKnown RBP7.68□□□□□ -1.18
UBR3-204ENST00000430321 JPH4Q96JJ6 628 aa7.68□□□□□ -1.18
UBR3-204ENST00000430321 ANP32EQ9BTT0 268 aa7.68□□□□□ -1.18
UBR3-204ENST00000430321 NCLP19338 710 aaKnown RBP7.68□□□□□ -1.18
UBR3-204ENST00000430321 MEX3CQ5U5Q3 659 aaKnown RBP7.68□□□□□ -1.18
UBR3-204ENST00000430321 CSB-PGBD3P0DP91 1061 aa7.68□□□□□ -1.18
UBR3-204ENST00000430321 TERF2IPQ9NYB0 399 aa7.67□□□□□ -1.18
UBR3-204ENST00000430321 MROH2BQ7Z745 1585 aa7.67□□□□□ -1.18
UBR3-204ENST00000430321 ARXQ96QS3 562 aa7.67□□□□□ -1.18
UBR3-204ENST00000430321 PLEKHH2Q8IVE3 1493 aa7.67□□□□□ -1.18
UBR3-204ENST00000430321 GGT6Q6P531 493 aa7.67□□□□□ -1.18
UBR3-204ENST00000430321 WASHC2CQ9Y4E1 1318 aa7.66□□□□□ -1.18
UBR3-204ENST00000430321 GRIN2BQ13224 1484 aa7.66□□□□□ -1.18
UBR3-204ENST00000430321 SRPK2P78362 688 aaKnown RBP7.66□□□□□ -1.18
UBR3-204ENST00000430321 LMOD3Q0VAK6 560 aa7.66□□□□□ -1.18
UBR3-204ENST00000430321 HMGXB3Q12766 1538 aa7.66□□□□□ -1.18
UBR3-204ENST00000430321 CCDC9Q9Y3X0 531 aaKnown RBP7.65□□□□□ -1.18
UBR3-204ENST00000430321 TDRD9Q8NDG6 1382 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms