RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 DDRGK1Q96HY6 314 aa9.35□□□□□ -0.91
CPS1-203ENST00000430249 TIMELESSQ9UNS1 1208 aa9.34□□□□□ -0.91
CPS1-203ENST00000430249 SMARCA2P51531 1590 aa9.34□□□□□ -0.91
CPS1-203ENST00000430249 FKBP8Q14318 412 aa9.32□□□□□ -0.92
CPS1-203ENST00000430249 CFAP53Q96M91 514 aa9.32□□□□□ -0.92
CPS1-203ENST00000430249 CHMP4BQ9H444 224 aaKnown RBP9.32□□□□□ -0.92
CPS1-203ENST00000430249 CCDC136Q96JN2 1154 aa9.31□□□□□ -0.92
CPS1-203ENST00000430249 MRS2Q9HD23 443 aa9.3□□□□□ -0.92
CPS1-203ENST00000430249 DDX10Q13206 875 aaKnown RBP9.29□□□□□ -0.92
CPS1-203ENST00000430249 BECN1Q14457 450 aa9.29□□□□□ -0.92
CPS1-203ENST00000430249 FAM9BQ8IZU0 186 aa9.28□□□□□ -0.92
CPS1-203ENST00000430249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.28□□□□□ -0.92
CPS1-203ENST00000430249 PNNQ9H307 717 aaKnown RBP9.28□□□□□ -0.92
CPS1-203ENST00000430249 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.92
CPS1-203ENST00000430249 GLIPR1L2Q4G1C9 344 aa9.27□□□□□ -0.93
CPS1-203ENST00000430249 MS4A1P11836 297 aa9.27□□□□□ -0.93
CPS1-203ENST00000430249 KANK1Q14678 1352 aa9.26□□□□□ -0.93
CPS1-203ENST00000430249 ERCC6Q03468 1493 aa9.26□□□□□ -0.93
CPS1-203ENST00000430249 NPM2Q86SE8 214 aaKnown RBP9.26□□□□□ -0.93
CPS1-203ENST00000430249 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
CPS1-203ENST00000430249 CASC1Q6TDU7 716 aa9.25□□□□□ -0.93
CPS1-203ENST00000430249 PPP1R15AO75807 674 aaPredicted RBP9.24□□□□□ -0.93
CPS1-203ENST00000430249 CCNB3Q8WWL7 1395 aa9.24□□□□□ -0.93
CPS1-203ENST00000430249 CFAP44Q96MT7 982 aa9.23□□□□□ -0.93
CPS1-203ENST00000430249 NCLP19338 710 aaKnown RBP9.22□□□□□ -0.93
CPS1-203ENST00000430249 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
CPS1-203ENST00000430249 GOLGA6L22H0YM25 854 aa9.22□□□□□ -0.93
CPS1-203ENST00000430249 KNSTRNQ9Y448 316 aa9.22□□□□□ -0.93
CPS1-203ENST00000430249 NUDCQ9Y266 331 aa9.21□□□□□ -0.93
CPS1-203ENST00000430249 CARMIL2Q6F5E8 1435 aa9.21□□□□□ -0.93
CPS1-203ENST00000430249 TOP2AP11388 1531 aaKnown RBP9.21□□□□□ -0.93
CPS1-203ENST00000430249 PDS5BQ9NTI5 1447 aa9.21□□□□□ -0.93
CPS1-203ENST00000430249 ARHGAP35Q9NRY4 1499 aa9.21□□□□□ -0.94
CPS1-203ENST00000430249 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
CPS1-203ENST00000430249 CARMIL1Q5VZK9 1371 aa9.2□□□□□ -0.94
CPS1-203ENST00000430249 FMN1Q68DA7 1419 aa9.19□□□□□ -0.94
CPS1-203ENST00000430249 ARID4BQ4LE39 1312 aaPredicted RBP9.19□□□□□ -0.94
CPS1-203ENST00000430249 RRP7BPQ9NSQ0 103 aa9.19□□□□□ -0.94
CPS1-203ENST00000430249 VPS8Q8N3P4 1428 aa9.18□□□□□ -0.94
CPS1-203ENST00000430249 CUX2O14529 1486 aa9.18□□□□□ -0.94
CPS1-203ENST00000430249 HAP1P54257 671 aaPredicted RBP9.18□□□□□ -0.94
CPS1-203ENST00000430249 CARD11Q9BXL7 1154 aa9.17□□□□□ -0.94
CPS1-203ENST00000430249 CDK11BP21127 795 aaKnown RBP9.17□□□□□ -0.94
CPS1-203ENST00000430249 MAPK8IP3Q9UPT6 1336 aa9.16□□□□□ -0.94
CPS1-203ENST00000430249 PPM1GO15355 546 aaPredicted RBP9.16□□□□□ -0.94
CPS1-203ENST00000430249 CCER2I3L3R5 266 aa9.15□□□□□ -0.94
CPS1-203ENST00000430249 SETD5Q9C0A6 1442 aa9.15□□□□□ -0.94
CPS1-203ENST00000430249 ERICH6BQ5W0A0 696 aa9.15□□□□□ -0.94
CPS1-203ENST00000430249 EIF4G1Q04637 1599 aaKnown RBP9.14□□□□□ -0.95
CPS1-203ENST00000430249 BCL11AQ9H165 835 aa9.14□□□□□ -0.95
CPS1-203ENST00000430249 ABCC8Q09428 1581 aa9.14□□□□□ -0.95
CPS1-203ENST00000430249 TMF1P82094 1093 aa9.14□□□□□ -0.95
CPS1-203ENST00000430249 CHMP4AQ9BY43 222 aa9.13□□□□□ -0.95
CPS1-203ENST00000430249 CCDC88BA6NC98 1476 aa9.13□□□□□ -0.95
CPS1-203ENST00000430249 EIF3AQ14152 1382 aaKnown RBP9.12□□□□□ -0.95
CPS1-203ENST00000430249 MIER1Q8N108 512 aa9.12□□□□□ -0.95
CPS1-203ENST00000430249 PPP4R2Q9NY27 417 aa9.12□□□□□ -0.95
CPS1-203ENST00000430249 KCNH8Q96L42 1107 aa9.12□□□□□ -0.95
CPS1-203ENST00000430249 FTSJ3Q8IY81 847 aaKnown RBP9.12□□□□□ -0.95
CPS1-203ENST00000430249 RSPH4AQ5TD94 716 aa9.11□□□□□ -0.95
CPS1-203ENST00000430249 PTMSP20962 102 aa9.1□□□□□ -0.95
CPS1-203ENST00000430249 ZRSR1Q15695 479 aaKnown RBP9.09□□□□□ -0.95
CPS1-203ENST00000430249 CALD1Q05682 793 aaKnown RBP9.09□□□□□ -0.95
CPS1-203ENST00000430249 POGKQ9P215 609 aa9.09□□□□□ -0.95
CPS1-203ENST00000430249 GOLGA6L6A8MZA4 724 aa9.09□□□□□ -0.95
CPS1-203ENST00000430249 TRIM44Q96DX7 344 aaPredicted RBP9.09□□□□□ -0.95
CPS1-203ENST00000430249 ANKRD30AQ9BXX3 1397 aa9.09□□□□□ -0.95
CPS1-203ENST00000430249 CECR2Q9BXF3 1484 aa9.08□□□□□ -0.96
CPS1-203ENST00000430249 C14orf37Q86TY3 774 aa9.08□□□□□ -0.96
CPS1-203ENST00000430249 SALL2Q9Y467 1007 aaPredicted RBP9.08□□□□□ -0.96
CPS1-203ENST00000430249 CCDC18Q5T9S5 1454 aa9.08□□□□□ -0.96
CPS1-203ENST00000430249 MROH2BQ7Z745 1585 aa9.07□□□□□ -0.96
CPS1-203ENST00000430249 RAPGEF2Q9Y4G8 1499 aa9.07□□□□□ -0.96
CPS1-203ENST00000430249 ROCK2O75116 1388 aaKnown RBP9.07□□□□□ -0.96
CPS1-203ENST00000430249 SOGA1O94964 1423 aa9.07□□□□□ -0.96
CPS1-203ENST00000430249 KTN1Q86UP2 1357 aaKnown RBP9.06□□□□□ -0.96
CPS1-203ENST00000430249 RALBP1Q15311 655 aa9.06□□□□□ -0.96
CPS1-203ENST00000430249 SCAF1Q9H7N4 1312 aaKnown RBP9.05□□□□□ -0.96
CPS1-203ENST00000430249 PHLDB1Q86UU1 1377 aa9.04□□□□□ -0.96
CPS1-203ENST00000430249 RGL3Q3MIN7 710 aa9.04□□□□□ -0.96
CPS1-203ENST00000430249 MCCP23508 829 aa9.04□□□□□ -0.96
CPS1-203ENST00000430249 UACAQ9BZF9 1416 aa9.03□□□□□ -0.96
CPS1-203ENST00000430249 NRDCO43847 1150 aa9.03□□□□□ -0.96
CPS1-203ENST00000430249 HDGFL2Q7Z4V5 671 aaPredicted RBP9.02□□□□□ -0.96
CPS1-203ENST00000430249 SMARCA4P51532 1647 aa9.02□□□□□ -0.97
CPS1-203ENST00000430249 CADPSQ9ULU8 1353 aa9.02□□□□□ -0.97
CPS1-203ENST00000430249 HDAC5Q9UQL6 1122 aa9.02□□□□□ -0.97
CPS1-203ENST00000430249 IPO8O15397 1037 aaKnown RBP9.02□□□□□ -0.97
CPS1-203ENST00000430249 PLPPR3Q6T4P5 718 aa9.02□□□□□ -0.97
CPS1-203ENST00000430249 EFCAB2Q5VUJ9 269 aa9.02□□□□□ -0.97
CPS1-203ENST00000430249 TNNT2P45379 298 aaPredicted RBP9□□□□□ -0.97
CPS1-203ENST00000430249 ZBTB7CA1YPR0 619 aa8.99□□□□□ -0.97
CPS1-203ENST00000430249 NBR1Q14596 966 aa8.99□□□□□ -0.97
CPS1-203ENST00000430249 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
CPS1-203ENST00000430249 MORC1Q86VD1 984 aa8.99□□□□□ -0.97
CPS1-203ENST00000430249 PTMAP06454 111 aaKnown RBP8.98□□□□□ -0.97
CPS1-203ENST00000430249 HSCBQ8IWL3 235 aa8.98□□□□□ -0.97
CPS1-203ENST00000430249 DCAF11Q8TEB1 546 aa8.98□□□□□ -0.97
CPS1-203ENST00000430249 HSP90AB1P08238 724 aaKnown RBP8.97□□□□□ -0.97
CPS1-203ENST00000430249 PDE3BQ13370 1112 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms