RNA–Protein interactions for RNA: ENST00000429829.5

XIST-204, X inactive specific transcript, humanhuman

TSL 1 (best) BASIC

Gene XIST, Length 19,275 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-204ENST00000429829 ATP1B4Q9UN42 357 aaPredicted RBP6.46□□□□□ -1.37
XIST-204ENST00000429829 FGD1P98174 961 aa6.45□□□□□ -1.38
XIST-204ENST00000429829 RBM10P98175 930 aaKnown RBP6.45□□□□□ -1.38
XIST-204ENST00000429829 C14orf37Q86TY3 774 aa6.44□□□□□ -1.38
XIST-204ENST00000429829 IPO9Q96P70 1041 aaKnown RBP6.43□□□□□ -1.38
XIST-204ENST00000429829 MAP7D2Q96T17 732 aa6.43□□□□□ -1.38
XIST-204ENST00000429829 HMGB1P09429 215 aaKnown RBP6.43□□□□□ -1.38
XIST-204ENST00000429829 PPP4R2Q9NY27 417 aa6.43□□□□□ -1.38
XIST-204ENST00000429829 SHROOM4Q9ULL8 1493 aa6.43□□□□□ -1.38
XIST-204ENST00000429829 LAS1LQ9Y4W2 734 aaKnown RBP6.42□□□□□ -1.38
XIST-204ENST00000429829 GSE1Q14687 1217 aa6.41□□□□□ -1.38
XIST-204ENST00000429829 IL27Q8NEV9 243 aa6.41□□□□□ -1.38
XIST-204ENST00000429829 BCL11BQ9C0K0 894 aaPredicted RBP6.41□□□□□ -1.38
XIST-204ENST00000429829 HSP90B1P14625 803 aaKnown RBP6.41□□□□□ -1.38
XIST-204ENST00000429829 TULP1O00294 542 aaPredicted RBP6.41□□□□□ -1.38
XIST-204ENST00000429829 TNNT3P45378 269 aaPredicted RBP6.4□□□□□ -1.38
XIST-204ENST00000429829 BRD2P25440 801 aaKnown RBP6.4□□□□□ -1.38
XIST-204ENST00000429829 MTERF4Q7Z6M4 381 aaKnown RBP6.4□□□□□ -1.39
XIST-204ENST00000429829 FAM43AQ8N2R8 423 aa6.4□□□□□ -1.39
XIST-204ENST00000429829 BBXQ8WY36 941 aaPredicted RBP6.39□□□□□ -1.39
XIST-204ENST00000429829 HAP1P54257 671 aaPredicted RBP6.39□□□□□ -1.39
XIST-204ENST00000429829 NISCHQ9Y2I1 1504 aa6.39□□□□□ -1.39
XIST-204ENST00000429829 SLC4A1APQ9BWU0 796 aaKnown RBP6.38□□□□□ -1.39
XIST-204ENST00000429829 TAF3Q5VWG9 929 aa6.38□□□□□ -1.39
XIST-204ENST00000429829 AMER1Q5JTC6 1135 aaPredicted RBP6.36□□□□□ -1.39
XIST-204ENST00000429829 PTMAP06454 111 aaKnown RBP6.36□□□□□ -1.39
XIST-204ENST00000429829 NAP1L2Q9ULW6 460 aaPredicted RBP6.36□□□□□ -1.39
XIST-204ENST00000429829 BECN1Q14457 450 aa6.36□□□□□ -1.39
XIST-204ENST00000429829 TPM2P07951 284 aa6.36□□□□□ -1.39
XIST-204ENST00000429829 CALRP27797 417 aaKnown RBP6.35□□□□□ -1.39
XIST-204ENST00000429829 HNRNPUL2Q1KMD3 747 aaKnown RBP6.35□□□□□ -1.39
XIST-204ENST00000429829 KLHL34Q8N239 644 aa6.34□□□□□ -1.39
XIST-204ENST00000429829 PDCL3Q9H2J4 239 aa6.34□□□□□ -1.39
XIST-204ENST00000429829 PAXIP1Q6ZW49 1069 aaPredicted RBP6.34□□□□□ -1.39
XIST-204ENST00000429829 ARID4BQ4LE39 1312 aaPredicted RBP6.34□□□□□ -1.4
XIST-204ENST00000429829 UPF2Q9HAU5 1272 aaKnown RBP6.33□□□□□ -1.4
XIST-204ENST00000429829 BCCIPQ9P287 314 aaKnown RBP eCLIP6.33□□□□□ -1.4
XIST-204ENST00000429829 TRIM52Q96A61 297 aa6.32□□□□□ -1.4
XIST-204ENST00000429829 PATL2C9JE40 543 aaKnown RBP6.32□□□□□ -1.4
XIST-204ENST00000429829 GOLGA6L3A6NEY3 463 aa6.32□□□□□ -1.4
XIST-204ENST00000429829 HNRNPUQ00839 825 aaKnown RBP eCLIP6.32□□□□□ -1.41e-6■■□□□ 14.1
XIST-204ENST00000429829 C11orf95C9JLR9 678 aaPredicted RBP6.3□□□□□ -1.4
XIST-204ENST00000429829 AAMPQ13685 434 aa6.29□□□□□ -1.4
XIST-204ENST00000429829 MSNP26038 577 aaKnown RBP6.29□□□□□ -1.4
XIST-204ENST00000429829 BRPF3Q9ULD4 1205 aa6.29□□□□□ -1.4
XIST-204ENST00000429829 FTSJ3Q8IY81 847 aaKnown RBP6.28□□□□□ -1.4
XIST-204ENST00000429829 CLGNO14967 610 aa6.28□□□□□ -1.4
XIST-204ENST00000429829 FAM13BQ9NYF5 915 aa6.28□□□□□ -1.4
XIST-204ENST00000429829 MSH5O43196 834 aa6.28□□□□□ -1.4
XIST-204ENST00000429829 MYH16Q9H6N6 1097 aa6.28□□□□□ -1.4
XIST-204ENST00000429829 CALD1Q05682 793 aaKnown RBP6.27□□□□□ -1.41
XIST-204ENST00000429829 AXDND1Q5T1B0 1012 aaPredicted RBP6.27□□□□□ -1.41
XIST-204ENST00000429829 IPO4Q8TEX9 1081 aaKnown RBP6.26□□□□□ -1.41
XIST-204ENST00000429829 CCDC9Q9Y3X0 531 aaKnown RBP6.26□□□□□ -1.41
XIST-204ENST00000429829 IRX3P78415 501 aaPredicted RBP6.26□□□□□ -1.41
XIST-204ENST00000429829 IRX6P78412 446 aaPredicted RBP6.26□□□□□ -1.41
XIST-204ENST00000429829 CHMP4AQ9BY43 222 aa6.26□□□□□ -1.41
XIST-204ENST00000429829 UBTFP17480 764 aaKnown RBP6.26□□□□□ -1.41
XIST-204ENST00000429829 TCERG1O14776 1098 aaKnown RBP6.25□□□□□ -1.41
XIST-204ENST00000429829 DDX10Q13206 875 aaKnown RBP6.24□□□□□ -1.41
XIST-204ENST00000429829 CHAF1AQ13111 956 aaPredicted RBP6.24□□□□□ -1.41
XIST-204ENST00000429829 B4GALNT3Q6L9W6 998 aa6.24□□□□□ -1.41
XIST-204ENST00000429829 DHX37Q8IY37 1157 aaKnown RBP6.24□□□□□ -1.41
XIST-204ENST00000429829 CHMP4BQ9H444 224 aaKnown RBP6.24□□□□□ -1.41
XIST-204ENST00000429829 GOLGA6L22H0YM25 854 aa6.23□□□□□ -1.41
XIST-204ENST00000429829 CCDC66A2RUB6 948 aa6.23□□□□□ -1.41
XIST-204ENST00000429829 GOLGA6L6A8MZA4 724 aa6.23□□□□□ -1.41
XIST-204ENST00000429829 ZNF771Q7L3S4 317 aaPredicted RBP6.23□□□□□ -1.41
XIST-204ENST00000429829 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.23□□□□□ -1.41
XIST-204ENST00000429829 CCER2I3L3R5 266 aa6.23□□□□□ -1.41
XIST-204ENST00000429829 CC2D1BQ5T0F9 858 aaKnown RBP6.23□□□□□ -1.41
XIST-204ENST00000429829 TSPYL1Q9H0U9 437 aa6.23□□□□□ -1.41
XIST-204ENST00000429829 CCDC180Q9P1Z9 1646 aa6.22□□□□□ -1.41
XIST-204ENST00000429829 CSPP1Q1MSJ5 1256 aa6.22□□□□□ -1.41
XIST-204ENST00000429829 RGS3P49796 1198 aa6.22□□□□□ -1.41
XIST-204ENST00000429829 FBXO3Q9UK99 471 aa6.21□□□□□ -1.42
XIST-204ENST00000429829 GOLGA6L1Q8N7Z2 621 aa6.2□□□□□ -1.42
XIST-204ENST00000429829 FRAT1Q92837 279 aaPredicted RBP6.2□□□□□ -1.42
XIST-204ENST00000429829 KIAA2012Q0VF49 1180 aa6.19□□□□□ -1.42
XIST-204ENST00000429829 PLCD4Q9BRC7 762 aa6.19□□□□□ -1.42
XIST-204ENST00000429829 DNAJC2Q99543 621 aaKnown RBP6.19□□□□□ -1.42
XIST-204ENST00000429829 WWC1Q8IX03 1113 aa6.18□□□□□ -1.42
XIST-204ENST00000429829 ARID3AQ99856 593 aa6.18□□□□□ -1.42
XIST-204ENST00000429829 PAK3O75914 559 aaPredicted RBP6.17□□□□□ -1.42
XIST-204ENST00000429829 KIF20AO95235 890 aa6.17□□□□□ -1.42
XIST-204ENST00000429829 FAM193AP78312 1265 aa6.17□□□□□ -1.42
XIST-204ENST00000429829 PLPPR3Q6T4P5 718 aa6.17□□□□□ -1.42
XIST-204ENST00000429829 PLCD3Q8N3E9 789 aa6.17□□□□□ -1.42
XIST-204ENST00000429829 RSPH4AQ5TD94 716 aa6.17□□□□□ -1.42
XIST-204ENST00000429829 NFKBIBQ15653 356 aa6.17□□□□□ -1.42
XIST-204ENST00000429829 SSR1P43307 286 aaKnown RBP6.17□□□□□ -1.42
XIST-204ENST00000429829 MS4A1P11836 297 aa6.16□□□□□ -1.42
XIST-204ENST00000429829 GTPBP4Q9BZE4 634 aaKnown RBP6.16□□□□□ -1.42
XIST-204ENST00000429829 MRE11P49959 708 aa6.16□□□□□ -1.42
XIST-204ENST00000429829 NOM1Q5C9Z4 860 aaKnown RBP6.16□□□□□ -1.42
XIST-204ENST00000429829 SMAP1Q8IYB5 467 aaPredicted RBP6.16□□□□□ -1.42
XIST-204ENST00000429829 PSMD1Q99460 953 aa6.15□□□□□ -1.42
XIST-204ENST00000429829 TPRNQ4KMQ1 711 aa6.15□□□□□ -1.42
XIST-204ENST00000429829 ZHX1Q9UKY1 873 aaPredicted RBP6.15□□□□□ -1.43
XIST-204ENST00000429829 ISY1Q9ULR0 285 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms