RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.64
STRC-201ENST00000428650 CDCA8Q53HL2 280 aa19.08■□□□□ 0.64
STRC-201ENST00000428650 CHIC2Q9UKJ5 165 aa19.08■□□□□ 0.64
STRC-201ENST00000428650 SCAF1Q9H7N4 1312 aaKnown RBP19.05■□□□□ 0.64
STRC-201ENST00000428650 BECN1Q14457 450 aa19.05■□□□□ 0.64
STRC-201ENST00000428650 TIMELESSQ9UNS1 1208 aa19.05■□□□□ 0.64
STRC-201ENST00000428650 MYH16Q9H6N6 1097 aa19.04■□□□□ 0.64
STRC-201ENST00000428650 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
STRC-201ENST00000428650 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
STRC-201ENST00000428650 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.64
STRC-201ENST00000428650 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
STRC-201ENST00000428650 BCL11AQ9H165 835 aa18.99■□□□□ 0.63
STRC-201ENST00000428650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.63
STRC-201ENST00000428650 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
STRC-201ENST00000428650 PLEKHD1A6NEE1 506 aa18.95■□□□□ 0.62
STRC-201ENST00000428650 CFAP53Q96M91 514 aa18.92■□□□□ 0.62
STRC-201ENST00000428650 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
STRC-201ENST00000428650 PPM1GO15355 546 aaPredicted RBP18.91■□□□□ 0.62
STRC-201ENST00000428650 GOLGA6L22H0YM25 854 aa18.9■□□□□ 0.62
STRC-201ENST00000428650 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
STRC-201ENST00000428650 RRP7BPQ9NSQ0 103 aa18.88■□□□□ 0.61
STRC-201ENST00000428650 CHMP4BQ9H444 224 aaKnown RBP18.87■□□□□ 0.61
STRC-201ENST00000428650 NBR1Q14596 966 aa18.86■□□□□ 0.61
STRC-201ENST00000428650 PPP4R2Q9NY27 417 aa18.86■□□□□ 0.61
STRC-201ENST00000428650 NCLP19338 710 aaKnown RBP18.85■□□□□ 0.61
STRC-201ENST00000428650 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.61
STRC-201ENST00000428650 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
STRC-201ENST00000428650 MS4A1P11836 297 aa18.82■□□□□ 0.6
STRC-201ENST00000428650 CCER2I3L3R5 266 aa18.82■□□□□ 0.6
STRC-201ENST00000428650 CFDP1Q9UEE9 299 aaPredicted RBP18.82■□□□□ 0.6
STRC-201ENST00000428650 ERICH6BQ5W0A0 696 aa18.78■□□□□ 0.6
STRC-201ENST00000428650 CASC1Q6TDU7 716 aa18.78■□□□□ 0.6
STRC-201ENST00000428650 CARD11Q9BXL7 1154 aa18.77■□□□□ 0.6
STRC-201ENST00000428650 TRIM44Q96DX7 344 aaPredicted RBP18.77■□□□□ 0.6
STRC-201ENST00000428650 PNNQ9H307 717 aaKnown RBP18.73■□□□□ 0.59
STRC-201ENST00000428650 VPS8Q8N3P4 1428 aa18.73■□□□□ 0.59
STRC-201ENST00000428650 IRX6P78412 446 aaPredicted RBP18.73■□□□□ 0.59
STRC-201ENST00000428650 NUDCQ9Y266 331 aa18.73■□□□□ 0.59
STRC-201ENST00000428650 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
STRC-201ENST00000428650 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
STRC-201ENST00000428650 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
STRC-201ENST00000428650 CFAP44Q96MT7 982 aa18.69■□□□□ 0.58
STRC-201ENST00000428650 PPP1R15AO75807 674 aaPredicted RBP18.68■□□□□ 0.58
STRC-201ENST00000428650 FTSJ3Q8IY81 847 aaKnown RBP18.67■□□□□ 0.58
STRC-201ENST00000428650 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
STRC-201ENST00000428650 MAPK8IP3Q9UPT6 1336 aa18.66■□□□□ 0.58
STRC-201ENST00000428650 ARHGAP35Q9NRY4 1499 aa18.65■□□□□ 0.58
STRC-201ENST00000428650 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
STRC-201ENST00000428650 TMF1P82094 1093 aa18.62■□□□□ 0.57
STRC-201ENST00000428650 KANK1Q14678 1352 aa18.61■□□□□ 0.57
STRC-201ENST00000428650 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
STRC-201ENST00000428650 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
STRC-201ENST00000428650 SMARCA2P51531 1590 aa18.6■□□□□ 0.57
STRC-201ENST00000428650 RGL3Q3MIN7 710 aa18.6■□□□□ 0.57
STRC-201ENST00000428650 CDK11BP21127 795 aaKnown RBP18.59■□□□□ 0.57
STRC-201ENST00000428650 ARID4BQ4LE39 1312 aaPredicted RBP18.59■□□□□ 0.57
STRC-201ENST00000428650 CUX2O14529 1486 aa18.58■□□□□ 0.57
STRC-201ENST00000428650 HAP1P54257 671 aaPredicted RBP18.58■□□□□ 0.56
STRC-201ENST00000428650 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
STRC-201ENST00000428650 ZRSR1Q15695 479 aaKnown RBP18.56■□□□□ 0.56
STRC-201ENST00000428650 FMN1Q68DA7 1419 aa18.55■□□□□ 0.56
STRC-201ENST00000428650 SIN3AQ96ST3 1273 aa18.55■□□□□ 0.56
STRC-201ENST00000428650 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
STRC-201ENST00000428650 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
STRC-201ENST00000428650 SOGA1O94964 1423 aa18.53■□□□□ 0.56
STRC-201ENST00000428650 PTMAP06454 111 aaKnown RBP18.52■□□□□ 0.56
STRC-201ENST00000428650 PTMSP20962 102 aa18.52■□□□□ 0.56
STRC-201ENST00000428650 ARXQ96QS3 562 aa18.52■□□□□ 0.56
STRC-201ENST00000428650 L1TD1Q5T7N2 865 aaKnown RBP18.5■□□□□ 0.55
STRC-201ENST00000428650 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
STRC-201ENST00000428650 RALBP1Q15311 655 aa18.49■□□□□ 0.55
STRC-201ENST00000428650 KTN1Q86UP2 1357 aaKnown RBP18.48■□□□□ 0.55
STRC-201ENST00000428650 GOLGA6L6A8MZA4 724 aa18.48■□□□□ 0.55
STRC-201ENST00000428650 HDGFP51858 240 aaKnown RBP18.48■□□□□ 0.55
STRC-201ENST00000428650 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
STRC-201ENST00000428650 POGKQ9P215 609 aa18.47■□□□□ 0.55
STRC-201ENST00000428650 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
STRC-201ENST00000428650 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
STRC-201ENST00000428650 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
STRC-201ENST00000428650 HSCBQ8IWL3 235 aa18.44■□□□□ 0.54
STRC-201ENST00000428650 ROCK2O75116 1388 aaKnown RBP18.43■□□□□ 0.54
STRC-201ENST00000428650 NRDCO43847 1150 aa18.43■□□□□ 0.54
STRC-201ENST00000428650 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
STRC-201ENST00000428650 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
STRC-201ENST00000428650 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
STRC-201ENST00000428650 CALD1Q05682 793 aaKnown RBP18.41■□□□□ 0.54
STRC-201ENST00000428650 C14orf37Q86TY3 774 aa18.41■□□□□ 0.54
STRC-201ENST00000428650 TCERG1O14776 1098 aaKnown RBP18.4■□□□□ 0.54
STRC-201ENST00000428650 MCCP23508 829 aa18.4■□□□□ 0.54
STRC-201ENST00000428650 RGS3P49796 1198 aa18.4■□□□□ 0.54
STRC-201ENST00000428650 FRAT1Q92837 279 aaPredicted RBP18.39■□□□□ 0.53
STRC-201ENST00000428650 IPO8O15397 1037 aaKnown RBP18.39■□□□□ 0.53
STRC-201ENST00000428650 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
STRC-201ENST00000428650 ANKRD30AQ9BXX3 1397 aa18.39■□□□□ 0.53
STRC-201ENST00000428650 RAB3GAP2Q9H2M9 1393 aa18.39■□□□□ 0.53
STRC-201ENST00000428650 EIF3AQ14152 1382 aaKnown RBP18.38■□□□□ 0.53
STRC-201ENST00000428650 DNTTIP2Q5QJE6 756 aaKnown RBP18.38■□□□□ 0.53
STRC-201ENST00000428650 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
STRC-201ENST00000428650 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
STRC-201ENST00000428650 PHLDB1Q86UU1 1377 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms