RNA–Protein interactions for RNA: ENST00000426154.5

SCRN1-206, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCRN1, Length 5,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-206ENST00000426154 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
SCRN1-206ENST00000426154 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
SCRN1-206ENST00000426154 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
SCRN1-206ENST00000426154 IRX6P78412 446 aaPredicted RBP12.81□□□□□ -0.36
SCRN1-206ENST00000426154 HDGFP51858 240 aaKnown RBP12.8□□□□□ -0.36
SCRN1-206ENST00000426154 ANP32BQ92688 251 aaKnown RBP12.8□□□□□ -0.36
SCRN1-206ENST00000426154 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.79□□□□□ -0.36
SCRN1-206ENST00000426154 ERCC6Q03468 1493 aa12.79□□□□□ -0.36
SCRN1-206ENST00000426154 NPHP1O15259 732 aa12.79□□□□□ -0.36
SCRN1-206ENST00000426154 TNIKQ9UKE5 1360 aa12.78□□□□□ -0.36
SCRN1-206ENST00000426154 MYH16Q9H6N6 1097 aa12.78□□□□□ -0.36
SCRN1-206ENST00000426154 CLIP1P30622 1438 aa12.78□□□□□ -0.36
SCRN1-206ENST00000426154 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
SCRN1-206ENST00000426154 MTUS2Q5JR59 1369 aa12.76□□□□□ -0.37
SCRN1-206ENST00000426154 EIF5BO60841 1220 aaKnown RBP12.76□□□□□ -0.37
SCRN1-206ENST00000426154 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
SCRN1-206ENST00000426154 HIRIP3Q9BW71 556 aaPredicted RBP12.74□□□□□ -0.37
SCRN1-206ENST00000426154 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
SCRN1-206ENST00000426154 GOLGA3Q08378 1498 aa12.73□□□□□ -0.37
SCRN1-206ENST00000426154 ARXQ96QS3 562 aa12.72□□□□□ -0.37
SCRN1-206ENST00000426154 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
SCRN1-206ENST00000426154 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCRN1-206ENST00000426154 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
SCRN1-206ENST00000426154 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
SCRN1-206ENST00000426154 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
SCRN1-206ENST00000426154 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
SCRN1-206ENST00000426154 CCDC136Q96JN2 1154 aa12.68□□□□□ -0.38
SCRN1-206ENST00000426154 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
SCRN1-206ENST00000426154 KDM2AQ9Y2K7 1162 aa12.66□□□□□ -0.38
SCRN1-206ENST00000426154 POGKQ9P215 609 aa12.63□□□□□ -0.39
SCRN1-206ENST00000426154 CEP164Q9UPV0 1460 aa12.63□□□□□ -0.39
SCRN1-206ENST00000426154 DEKP35659 375 aaKnown RBP12.62□□□□□ -0.39
SCRN1-206ENST00000426154 MRS2Q9HD23 443 aa12.62□□□□□ -0.39
SCRN1-206ENST00000426154 BAZ1AQ9NRL2 1556 aaPredicted RBP12.61□□□□□ -0.39
SCRN1-206ENST00000426154 KIF27Q86VH2 1401 aa12.6□□□□□ -0.39
SCRN1-206ENST00000426154 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
SCRN1-206ENST00000426154 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
SCRN1-206ENST00000426154 WRNQ14191 1432 aaPredicted RBP eCLIP12.6□□□□□ -0.39
SCRN1-206ENST00000426154 PPP4R2Q9NY27 417 aa12.59□□□□□ -0.39
SCRN1-206ENST00000426154 NOP58Q9Y2X3 529 aaKnown RBP12.59□□□□□ -0.39
SCRN1-206ENST00000426154 CFDP1Q9UEE9 299 aaPredicted RBP12.59□□□□□ -0.39
SCRN1-206ENST00000426154 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
SCRN1-206ENST00000426154 SOGA1O94964 1423 aa12.57□□□□□ -0.4
SCRN1-206ENST00000426154 KANK1Q14678 1352 aa12.57□□□□□ -0.4
SCRN1-206ENST00000426154 NUDCQ9Y266 331 aa12.56□□□□□ -0.4
SCRN1-206ENST00000426154 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
SCRN1-206ENST00000426154 SIN3AQ96ST3 1273 aa12.54□□□□□ -0.4
SCRN1-206ENST00000426154 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
SCRN1-206ENST00000426154 CCER2I3L3R5 266 aa12.54□□□□□ -0.4
SCRN1-206ENST00000426154 PNNQ9H307 717 aaKnown RBP12.53□□□□□ -0.4
SCRN1-206ENST00000426154 B4GALNT3Q6L9W6 998 aa12.52□□□□□ -0.41
SCRN1-206ENST00000426154 SENP3Q9H4L4 574 aaPredicted RBP12.52□□□□□ -0.41
SCRN1-206ENST00000426154 CHMP4BQ9H444 224 aaKnown RBP12.51□□□□□ -0.41
SCRN1-206ENST00000426154 MAPK8IP3Q9UPT6 1336 aa12.51□□□□□ -0.41
SCRN1-206ENST00000426154 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
SCRN1-206ENST00000426154 MLECQ14165 292 aa12.51□□□□□ -0.41
SCRN1-206ENST00000426154 PPM1GO15355 546 aaPredicted RBP12.5□□□□□ -0.41
SCRN1-206ENST00000426154 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
SCRN1-206ENST00000426154 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
SCRN1-206ENST00000426154 FHAD1B1AJZ9 1412 aa12.5□□□□□ -0.41
SCRN1-206ENST00000426154 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
SCRN1-206ENST00000426154 CASC1Q6TDU7 716 aa12.49□□□□□ -0.41
SCRN1-206ENST00000426154 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
SCRN1-206ENST00000426154 TIMELESSQ9UNS1 1208 aa12.48□□□□□ -0.41
SCRN1-206ENST00000426154 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
SCRN1-206ENST00000426154 CCDC88BA6NC98 1476 aa12.48□□□□□ -0.41
SCRN1-206ENST00000426154 RGL3Q3MIN7 710 aa12.48□□□□□ -0.41
SCRN1-206ENST00000426154 CCNB3Q8WWL7 1395 aa12.46□□□□□ -0.41
SCRN1-206ENST00000426154 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
SCRN1-206ENST00000426154 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
SCRN1-206ENST00000426154 RRP7BPQ9NSQ0 103 aa12.45□□□□□ -0.42
SCRN1-206ENST00000426154 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
SCRN1-206ENST00000426154 CCDC9Q9Y3X0 531 aaKnown RBP12.44□□□□□ -0.42
SCRN1-206ENST00000426154 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
SCRN1-206ENST00000426154 DDRGK1Q96HY6 314 aa12.43□□□□□ -0.42
SCRN1-206ENST00000426154 ERICH6BQ5W0A0 696 aa12.42□□□□□ -0.42
SCRN1-206ENST00000426154 DHX57Q6P158 1386 aaKnown RBP12.41□□□□□ -0.42
SCRN1-206ENST00000426154 MROH2BQ7Z745 1585 aa12.41□□□□□ -0.42
SCRN1-206ENST00000426154 TULP1O00294 542 aaPredicted RBP12.41□□□□□ -0.42
SCRN1-206ENST00000426154 OS9Q13438 667 aaPredicted RBP12.41□□□□□ -0.42
SCRN1-206ENST00000426154 EID1Q9Y6B2 187 aa12.41□□□□□ -0.42
SCRN1-206ENST00000426154 CSB-PGBD3P0DP91 1061 aa12.4□□□□□ -0.42
SCRN1-206ENST00000426154 MS4A1P11836 297 aa12.4□□□□□ -0.42
SCRN1-206ENST00000426154 SENP3-EIF4A1A0A087X0R7 540 aa12.39□□□□□ -0.43
SCRN1-206ENST00000426154 KANK4Q5T7N3 995 aaPredicted RBP12.39□□□□□ -0.43
SCRN1-206ENST00000426154 CARMIL2Q6F5E8 1435 aa12.39□□□□□ -0.43
SCRN1-206ENST00000426154 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
SCRN1-206ENST00000426154 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
SCRN1-206ENST00000426154 GOLGA6L22H0YM25 854 aa12.38□□□□□ -0.43
SCRN1-206ENST00000426154 FTSJ3Q8IY81 847 aaKnown RBP12.37□□□□□ -0.43
SCRN1-206ENST00000426154 BECN1Q14457 450 aa12.37□□□□□ -0.43
SCRN1-206ENST00000426154 FGD1P98174 961 aa12.36□□□□□ -0.43
SCRN1-206ENST00000426154 CARD11Q9BXL7 1154 aa12.36□□□□□ -0.43
SCRN1-206ENST00000426154 RAB3GAP2Q9H2M9 1393 aa12.35□□□□□ -0.43
SCRN1-206ENST00000426154 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
SCRN1-206ENST00000426154 TNNT2P45379 298 aaPredicted RBP12.34□□□□□ -0.43
SCRN1-206ENST00000426154 ISY1Q9ULR0 285 aaKnown RBP12.34□□□□□ -0.43
SCRN1-206ENST00000426154 PDS5BQ9NTI5 1447 aa12.34□□□□□ -0.43
SCRN1-206ENST00000426154 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
SCRN1-206ENST00000426154 SRPK2P78362 688 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms