RNA–Protein interactions for RNA: ENST00000425021.1

LINC00494-202, long intergenic non-protein coding RNA 494, humanhuman

TSL 2

Gene LINC00494, Length 438 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-202ENST00000425021 CCDC61Q9Y6R9 512 aa14.53□□□□□ -0.08
LINC00494-202ENST00000425021 VASPP50552 380 aaPredicted RBP14.52□□□□□ -0.09
LINC00494-202ENST00000425021 POTEIP0CG38 1075 aa14.51□□□□□ -0.09
LINC00494-202ENST00000425021 NUBP1P53384 320 aa14.47□□□□□ -0.09
LINC00494-202ENST00000425021 KLHL34Q8N239 644 aa14.47□□□□□ -0.09
LINC00494-202ENST00000425021 FAM212AQ96EL1 285 aa14.47□□□□□ -0.09
LINC00494-202ENST00000425021 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
LINC00494-202ENST00000425021 KIF12Q96FN5 646 aa14.43□□□□□ -0.1
LINC00494-202ENST00000425021 MAP3K13O43283 966 aa14.37□□□□□ -0.11
LINC00494-202ENST00000425021 LHX8Q68G74 356 aa14.37□□□□□ -0.11
LINC00494-202ENST00000425021 DCAF8Q5TAQ9 597 aa14.36□□□□□ -0.11
LINC00494-202ENST00000425021 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
LINC00494-202ENST00000425021 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
LINC00494-202ENST00000425021 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
LINC00494-202ENST00000425021 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
LINC00494-202ENST00000425021 ATMINO43313 823 aaPredicted RBP14.28□□□□□ -0.12
LINC00494-202ENST00000425021 GSE1Q14687 1217 aa14.27□□□□□ -0.13
LINC00494-202ENST00000425021 TIE1P35590 1138 aa14.24□□□□□ -0.13
LINC00494-202ENST00000425021 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
LINC00494-202ENST00000425021 SLC39A7Q92504 469 aa14.23□□□□□ -0.13
LINC00494-202ENST00000425021 SPOCK2Q92563 424 aa14.23□□□□□ -0.13
LINC00494-202ENST00000425021 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
LINC00494-202ENST00000425021 PYGBP11216 843 aa14.21□□□□□ -0.13
LINC00494-202ENST00000425021 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
LINC00494-202ENST00000425021 C7P10643 843 aa14.2□□□□□ -0.14
LINC00494-202ENST00000425021 ATN1P54259 1190 aaPredicted RBP14.2□□□□□ -0.14
LINC00494-202ENST00000425021 TRPC6Q9Y210 931 aa14.2□□□□□ -0.14
LINC00494-202ENST00000425021 METRNQ9UJH8 293 aa14.19□□□□□ -0.14
LINC00494-202ENST00000425021 IFNL1Q8IU54 200 aa14.18□□□□□ -0.14
LINC00494-202ENST00000425021 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
LINC00494-202ENST00000425021 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
LINC00494-202ENST00000425021 TTLL13PA6NNM8 815 aa14.14□□□□□ -0.15
LINC00494-202ENST00000425021 CIZ1Q9ULV3 898 aaPredicted RBP14.12□□□□□ -0.15
LINC00494-202ENST00000425021 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
LINC00494-202ENST00000425021 TRIM35Q9UPQ4 493 aa14.08□□□□□ -0.16
LINC00494-202ENST00000425021 ZNF467Q7Z7K2 595 aaPredicted RBP14.07□□□□□ -0.16
LINC00494-202ENST00000425021 CHRM1P11229 460 aaPredicted RBP14.06□□□□□ -0.16
LINC00494-202ENST00000425021 PCDHB8Q9UN66 801 aa14.05□□□□□ -0.16
LINC00494-202ENST00000425021 SEC24BO95487 1268 aa14.04□□□□□ -0.16
LINC00494-202ENST00000425021 POTEB2H3BUK9 544 aa14.03□□□□□ -0.16
LINC00494-202ENST00000425021 SLC24A1O60721 1099 aa14.02□□□□□ -0.17
LINC00494-202ENST00000425021 IER5LQ5T953 404 aa14.02□□□□□ -0.17
LINC00494-202ENST00000425021 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
LINC00494-202ENST00000425021 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
LINC00494-202ENST00000425021 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
LINC00494-202ENST00000425021 ABCC9O60706 1549 aa13.94□□□□□ -0.18
LINC00494-202ENST00000425021 SCUBE2Q9NQ36 999 aa13.92□□□□□ -0.18
LINC00494-202ENST00000425021 COLQQ9Y215 455 aaPredicted RBP13.92□□□□□ -0.18
LINC00494-202ENST00000425021 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
LINC00494-202ENST00000425021 PLCG2P16885 1265 aa13.91□□□□□ -0.18
LINC00494-202ENST00000425021 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
LINC00494-202ENST00000425021 PSEN1P49768 467 aa13.89□□□□□ -0.19
LINC00494-202ENST00000425021 PDAP1Q13442 181 aaKnown RBP13.88□□□□□ -0.19
LINC00494-202ENST00000425021 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
LINC00494-202ENST00000425021 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
LINC00494-202ENST00000425021 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.2
LINC00494-202ENST00000425021 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
LINC00494-202ENST00000425021 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
LINC00494-202ENST00000425021 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
LINC00494-202ENST00000425021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00494-202ENST00000425021 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
LINC00494-202ENST00000425021 TAOK2Q9UL54 1235 aa13.66□□□□□ -0.22
LINC00494-202ENST00000425021 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
LINC00494-202ENST00000425021 RNF25Q96BH1 459 aaPredicted RBP13.65□□□□□ -0.22
LINC00494-202ENST00000425021 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
LINC00494-202ENST00000425021 L3MBTL3Q96JM7 780 aaPredicted RBP13.64□□□□□ -0.23
LINC00494-202ENST00000425021 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
LINC00494-202ENST00000425021 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
LINC00494-202ENST00000425021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
LINC00494-202ENST00000425021 C3orf67Q6ZVT6 689 aa13.6□□□□□ -0.23
LINC00494-202ENST00000425021 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
LINC00494-202ENST00000425021 G3V3G9 751 aa13.58□□□□□ -0.24
LINC00494-202ENST00000425021 EFCAB3Q8N7B9 438 aa13.58□□□□□ -0.24
LINC00494-202ENST00000425021 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
LINC00494-202ENST00000425021 FAM163AQ96GL9 167 aaPredicted RBP13.57□□□□□ -0.24
LINC00494-202ENST00000425021 PKD2Q13563 968 aa13.54□□□□□ -0.24
LINC00494-202ENST00000425021 POTEMA6NI47 508 aa13.52□□□□□ -0.25
LINC00494-202ENST00000425021 SOX12O15370 315 aa13.5□□□□□ -0.25
LINC00494-202ENST00000425021 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
LINC00494-202ENST00000425021 POTEGQ6S5H5 508 aa13.49□□□□□ -0.25
LINC00494-202ENST00000425021 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
LINC00494-202ENST00000425021 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
LINC00494-202ENST00000425021 RB1CC1Q8TDY2 1594 aa13.48□□□□□ -0.25
LINC00494-202ENST00000425021 NACADO15069 1562 aa13.47□□□□□ -0.25
LINC00494-202ENST00000425021 STK24Q9Y6E0 443 aa13.47□□□□□ -0.25
LINC00494-202ENST00000425021 STK25O00506 426 aa13.46□□□□□ -0.25
LINC00494-202ENST00000425021 SNPHO15079 494 aa13.46□□□□□ -0.25
LINC00494-202ENST00000425021 RGL2O15211 777 aa13.45□□□□□ -0.26
LINC00494-202ENST00000425021 LCE2DQ5TA82 110 aaPredicted RBP13.42□□□□□ -0.26
LINC00494-202ENST00000425021 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
LINC00494-202ENST00000425021 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
LINC00494-202ENST00000425021 ZCCHC6Q5VYS8 1495 aaKnown RBP13.4□□□□□ -0.26
LINC00494-202ENST00000425021 NLRP6P59044 892 aa13.39□□□□□ -0.27
LINC00494-202ENST00000425021 ST18O60284 1047 aa13.37□□□□□ -0.27
LINC00494-202ENST00000425021 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
LINC00494-202ENST00000425021 DCAF1Q9Y4B6 1507 aa13.34□□□□□ -0.27
LINC00494-202ENST00000425021 PCDH10Q9P2E7 1040 aa13.34□□□□□ -0.27
LINC00494-202ENST00000425021 MICALL2Q8IY33 904 aa13.33□□□□□ -0.28
LINC00494-202ENST00000425021 MS4A4AQ96JQ5 239 aa13.33□□□□□ -0.28
LINC00494-202ENST00000425021 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms