RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
DENND3-202ENST00000424248 PLEKHD1A6NEE1 506 aa18.78■□□□□ 0.6
DENND3-202ENST00000424248 EIF5BO60841 1220 aaKnown RBP18.76■□□□□ 0.59
DENND3-202ENST00000424248 UPF2Q9HAU5 1272 aaKnown RBP18.76■□□□□ 0.59
DENND3-202ENST00000424248 RRP7BPQ9NSQ0 103 aa18.74■□□□□ 0.59
DENND3-202ENST00000424248 SLC24A1O60721 1099 aa18.73■□□□□ 0.59
DENND3-202ENST00000424248 NBR1Q14596 966 aa18.73■□□□□ 0.59
DENND3-202ENST00000424248 SUPT16HQ9Y5B9 1047 aaKnown RBP18.73■□□□□ 0.59
DENND3-202ENST00000424248 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.72■□□□□ 0.59
DENND3-202ENST00000424248 ANP32BQ92688 251 aaKnown RBP18.72■□□□□ 0.59
DENND3-202ENST00000424248 FHAD1B1AJZ9 1412 aa18.69■□□□□ 0.58
DENND3-202ENST00000424248 KDM2AQ9Y2K7 1162 aa18.69■□□□□ 0.58
DENND3-202ENST00000424248 WDR43Q15061 677 aaKnown RBP eCLIP18.66■□□□□ 0.58
DENND3-202ENST00000424248 CFDP1Q9UEE9 299 aaPredicted RBP18.65■□□□□ 0.58
DENND3-202ENST00000424248 DDRGK1Q96HY6 314 aa18.65■□□□□ 0.58
DENND3-202ENST00000424248 TIMELESSQ9UNS1 1208 aa18.64■□□□□ 0.57
DENND3-202ENST00000424248 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
DENND3-202ENST00000424248 CARMIL1Q5VZK9 1371 aa18.61■□□□□ 0.57
DENND3-202ENST00000424248 PPP4R2Q9NY27 417 aa18.61■□□□□ 0.57
DENND3-202ENST00000424248 SOGA1O94964 1423 aa18.6■□□□□ 0.57
DENND3-202ENST00000424248 IRX6P78412 446 aaPredicted RBP18.6■□□□□ 0.57
DENND3-202ENST00000424248 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
DENND3-202ENST00000424248 CCNB3Q8WWL7 1395 aa18.59■□□□□ 0.57
DENND3-202ENST00000424248 SMARCA2P51531 1590 aa18.58■□□□□ 0.57
DENND3-202ENST00000424248 BCL11AQ9H165 835 aa18.58■□□□□ 0.56
DENND3-202ENST00000424248 SALL2Q9Y467 1007 aaPredicted RBP18.58■□□□□ 0.56
DENND3-202ENST00000424248 CUX2O14529 1486 aa18.57■□□□□ 0.56
DENND3-202ENST00000424248 HIRIP3Q9BW71 556 aaPredicted RBP18.57■□□□□ 0.56
DENND3-202ENST00000424248 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
DENND3-202ENST00000424248 CCER2I3L3R5 266 aa18.56■□□□□ 0.56
DENND3-202ENST00000424248 KCNH8Q96L42 1107 aa18.55■□□□□ 0.56
DENND3-202ENST00000424248 HSP90AA1P07900 732 aaKnown RBP18.55■□□□□ 0.56
DENND3-202ENST00000424248 CDCA8Q53HL2 280 aa18.55■□□□□ 0.56
DENND3-202ENST00000424248 VPS8Q8N3P4 1428 aa18.54■□□□□ 0.56
DENND3-202ENST00000424248 ERICH6BQ5W0A0 696 aa18.51■□□□□ 0.55
DENND3-202ENST00000424248 ERCC6Q03468 1493 aa18.48■□□□□ 0.55
DENND3-202ENST00000424248 BECN1Q14457 450 aa18.47■□□□□ 0.55
DENND3-202ENST00000424248 NOP58Q9Y2X3 529 aaKnown RBP18.47■□□□□ 0.55
DENND3-202ENST00000424248 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
DENND3-202ENST00000424248 RGL3Q3MIN7 710 aa18.45■□□□□ 0.54
DENND3-202ENST00000424248 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
DENND3-202ENST00000424248 RBM19Q9Y4C8 960 aaKnown RBP18.43■□□□□ 0.54
DENND3-202ENST00000424248 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
DENND3-202ENST00000424248 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
DENND3-202ENST00000424248 KNSTRNQ9Y448 316 aa18.4■□□□□ 0.54
DENND3-202ENST00000424248 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
DENND3-202ENST00000424248 CFAP53Q96M91 514 aa18.38■□□□□ 0.53
DENND3-202ENST00000424248 SETD5Q9C0A6 1442 aa18.38■□□□□ 0.53
DENND3-202ENST00000424248 PPP1R15AO75807 674 aaPredicted RBP18.38■□□□□ 0.53
DENND3-202ENST00000424248 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
DENND3-202ENST00000424248 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
DENND3-202ENST00000424248 FMN1Q68DA7 1419 aa18.35■□□□□ 0.53
DENND3-202ENST00000424248 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
DENND3-202ENST00000424248 TSHZ2Q9NRE2 1034 aa18.34■□□□□ 0.53
DENND3-202ENST00000424248 MYH16Q9H6N6 1097 aa18.33■□□□□ 0.53
DENND3-202ENST00000424248 WIZO95785 1651 aa18.32■□□□□ 0.52
DENND3-202ENST00000424248 CARMIL2Q6F5E8 1435 aa18.29■□□□□ 0.52
DENND3-202ENST00000424248 TRIM44Q96DX7 344 aaPredicted RBP18.28■□□□□ 0.52
DENND3-202ENST00000424248 DEKP35659 375 aaKnown RBP18.27■□□□□ 0.52
DENND3-202ENST00000424248 KANK4Q5T7N3 995 aaPredicted RBP18.27■□□□□ 0.52
DENND3-202ENST00000424248 CADPSQ9ULU8 1353 aa18.27■□□□□ 0.52
DENND3-202ENST00000424248 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
DENND3-202ENST00000424248 GOLGA6L22H0YM25 854 aa18.25■□□□□ 0.51
DENND3-202ENST00000424248 KANK1Q14678 1352 aa18.24■□□□□ 0.51
DENND3-202ENST00000424248 ATAD2BQ9ULI0 1458 aa18.23■□□□□ 0.51
DENND3-202ENST00000424248 TMF1P82094 1093 aa18.22■□□□□ 0.51
DENND3-202ENST00000424248 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
DENND3-202ENST00000424248 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
DENND3-202ENST00000424248 ARXQ96QS3 562 aa18.21■□□□□ 0.51
DENND3-202ENST00000424248 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.5
DENND3-202ENST00000424248 DCAF11Q8TEB1 546 aa18.2■□□□□ 0.5
DENND3-202ENST00000424248 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
DENND3-202ENST00000424248 RAB3GAP2Q9H2M9 1393 aa18.19■□□□□ 0.5
DENND3-202ENST00000424248 LAS1LQ9Y4W2 734 aaKnown RBP18.18■□□□□ 0.5
DENND3-202ENST00000424248 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
DENND3-202ENST00000424248 POGKQ9P215 609 aa18.16■□□□□ 0.5
DENND3-202ENST00000424248 ARID4BQ4LE39 1312 aaPredicted RBP18.14■□□□□ 0.49
DENND3-202ENST00000424248 PKD2Q13563 968 aa18.14■□□□□ 0.49
DENND3-202ENST00000424248 ANKRD30AQ9BXX3 1397 aa18.13■□□□□ 0.49
DENND3-202ENST00000424248 HSPA5P11021 654 aaKnown RBP18.12■□□□□ 0.49
DENND3-202ENST00000424248 MS4A1P11836 297 aa18.11■□□□□ 0.49
DENND3-202ENST00000424248 TCERG1O14776 1098 aaKnown RBP18.11■□□□□ 0.49
DENND3-202ENST00000424248 CHMP4BQ9H444 224 aaKnown RBP18.11■□□□□ 0.49
DENND3-202ENST00000424248 C14orf37Q86TY3 774 aa18.11■□□□□ 0.49
DENND3-202ENST00000424248 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
DENND3-202ENST00000424248 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
DENND3-202ENST00000424248 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
DENND3-202ENST00000424248 L1TD1Q5T7N2 865 aaKnown RBP18.1■□□□□ 0.49
DENND3-202ENST00000424248 NCLP19338 710 aaKnown RBP18.09■□□□□ 0.49
DENND3-202ENST00000424248 EFCAB2Q5VUJ9 269 aa18.09■□□□□ 0.49
DENND3-202ENST00000424248 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.48
DENND3-202ENST00000424248 RSPH4AQ5TD94 716 aa18.08■□□□□ 0.48
DENND3-202ENST00000424248 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
DENND3-202ENST00000424248 HDGFP51858 240 aaKnown RBP18.07■□□□□ 0.48
DENND3-202ENST00000424248 CCDC18Q5T9S5 1454 aa18.06■□□□□ 0.48
DENND3-202ENST00000424248 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
DENND3-202ENST00000424248 FHOD3Q2V2M9 1422 aa18.05■□□□□ 0.48
DENND3-202ENST00000424248 NUP155O75694 1391 aa18.05■□□□□ 0.48
DENND3-202ENST00000424248 DHX57Q6P158 1386 aaKnown RBP18.05■□□□□ 0.48
DENND3-202ENST00000424248 TNNT2P45379 298 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms