RNA–Protein interactions for RNA: ENST00000424022.2

LBR-204, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-204ENST00000424022 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
LBR-204ENST00000424022 NUBP1P53384 320 aa14.07□□□□□ -0.16
LBR-204ENST00000424022 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
LBR-204ENST00000424022 FAM212AQ96EL1 285 aa14.01□□□□□ -0.17
LBR-204ENST00000424022 DCAF8Q5TAQ9 597 aa13.97□□□□□ -0.17
LBR-204ENST00000424022 RGL2O15211 777 aa13.96□□□□□ -0.17
LBR-204ENST00000424022 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
LBR-204ENST00000424022 PLCB2Q00722 1185 aa13.9□□□□□ -0.18
LBR-204ENST00000424022 PAK3O75914 559 aaPredicted RBP13.89□□□□□ -0.19
LBR-204ENST00000424022 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
LBR-204ENST00000424022 GABBR2O75899 941 aa13.88□□□□□ -0.19
LBR-204ENST00000424022 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
LBR-204ENST00000424022 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
LBR-204ENST00000424022 BBXQ8WY36 941 aaPredicted RBP13.87□□□□□ -0.19
LBR-204ENST00000424022 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
LBR-204ENST00000424022 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
LBR-204ENST00000424022 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.84□□□□□ -0.19
LBR-204ENST00000424022 PHF12Q96QT6 1004 aa13.81□□□□□ -0.2
LBR-204ENST00000424022 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
LBR-204ENST00000424022 RNF25Q96BH1 459 aaPredicted RBP13.78□□□□□ -0.2
LBR-204ENST00000424022 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
LBR-204ENST00000424022 HS6ST3Q8IZP7 471 aa13.75□□□□□ -0.21
LBR-204ENST00000424022 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
LBR-204ENST00000424022 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
LBR-204ENST00000424022 CLCN6P51797 869 aa13.72□□□□□ -0.21
LBR-204ENST00000424022 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
LBR-204ENST00000424022 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
LBR-204ENST00000424022 GALR2O43603 387 aaPredicted RBP13.7□□□□□ -0.22
LBR-204ENST00000424022 PYGBP11216 843 aa13.7□□□□□ -0.22
LBR-204ENST00000424022 HAP1P54257 671 aaPredicted RBP13.65□□□□□ -0.22
LBR-204ENST00000424022 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
LBR-204ENST00000424022 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
LBR-204ENST00000424022 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
LBR-204ENST00000424022 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
LBR-204ENST00000424022 MS4A3Q96HJ5 214 aa13.62□□□□□ -0.23
LBR-204ENST00000424022 POTEIP0CG38 1075 aa13.61□□□□□ -0.23
LBR-204ENST00000424022 MAP3K13O43283 966 aa13.6□□□□□ -0.23
LBR-204ENST00000424022 STK25O00506 426 aa13.59□□□□□ -0.23
LBR-204ENST00000424022 CFAP44Q96MT7 982 aa13.59□□□□□ -0.23
LBR-204ENST00000424022 DCBLD2Q96PD2 775 aa13.58□□□□□ -0.24
LBR-204ENST00000424022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
LBR-204ENST00000424022 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
LBR-204ENST00000424022 VSIG10Q8N0Z9 540 aa13.54□□□□□ -0.24
LBR-204ENST00000424022 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.25
LBR-204ENST00000424022 BCL11BQ9C0K0 894 aaPredicted RBP13.52□□□□□ -0.25
LBR-204ENST00000424022 RYDENQ9NUL5 291 aaKnown RBP13.51□□□□□ -0.25
LBR-204ENST00000424022 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
LBR-204ENST00000424022 STK24Q9Y6E0 443 aa13.51□□□□□ -0.25
LBR-204ENST00000424022 TRPC6Q9Y210 931 aa13.5□□□□□ -0.25
LBR-204ENST00000424022 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
LBR-204ENST00000424022 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
LBR-204ENST00000424022 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
LBR-204ENST00000424022 ATMINO43313 823 aaPredicted RBP13.41□□□□□ -0.26
LBR-204ENST00000424022 GTPBP6O43824 516 aaPredicted RBP13.41□□□□□ -0.26
LBR-204ENST00000424022 PSEN1P49768 467 aa13.41□□□□□ -0.26
LBR-204ENST00000424022 ASTLQ6HA08 431 aaPredicted RBP13.41□□□□□ -0.26
LBR-204ENST00000424022 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
LBR-204ENST00000424022 BMP2KQ9NSY1 1161 aaPredicted RBP13.4□□□□□ -0.26
LBR-204ENST00000424022 TIE1P35590 1138 aa13.37□□□□□ -0.27
LBR-204ENST00000424022 ATN1P54259 1190 aaPredicted RBP13.37□□□□□ -0.27
LBR-204ENST00000424022 TSHZ2Q9NRE2 1034 aa13.36□□□□□ -0.27
LBR-204ENST00000424022 NISCHQ9Y2I1 1504 aa13.35□□□□□ -0.27
LBR-204ENST00000424022 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
LBR-204ENST00000424022 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
LBR-204ENST00000424022 KDM2AQ9Y2K7 1162 aa13.3□□□□□ -0.28
LBR-204ENST00000424022 LHX8Q68G74 356 aa13.26□□□□□ -0.29
LBR-204ENST00000424022 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
LBR-204ENST00000424022 SOX12O15370 315 aa13.25□□□□□ -0.29
LBR-204ENST00000424022 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
LBR-204ENST00000424022 METRNQ9UJH8 293 aa13.25□□□□□ -0.29
LBR-204ENST00000424022 C7P10643 843 aa13.23□□□□□ -0.29
LBR-204ENST00000424022 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
LBR-204ENST00000424022 BCANQ96GW7 911 aa13.21□□□□□ -0.29
LBR-204ENST00000424022 NLRP6P59044 892 aa13.2□□□□□ -0.3
LBR-204ENST00000424022 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
LBR-204ENST00000424022 MFRPQ9BY79 579 aa13.2□□□□□ -0.3
LBR-204ENST00000424022 POTEB2H3BUK9 544 aa13.18□□□□□ -0.3
LBR-204ENST00000424022 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
LBR-204ENST00000424022 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
LBR-204ENST00000424022 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
LBR-204ENST00000424022 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
LBR-204ENST00000424022 IER5LQ5T953 404 aa13.12□□□□□ -0.31
LBR-204ENST00000424022 SEC24BO95487 1268 aa13.11□□□□□ -0.31
LBR-204ENST00000424022 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
LBR-204ENST00000424022 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
LBR-204ENST00000424022 POTEJP0CG39 1038 aa13.07□□□□□ -0.32
LBR-204ENST00000424022 IRX5P78411 483 aaPredicted RBP13.05□□□□□ -0.32
LBR-204ENST00000424022 PLCG2P16885 1265 aa13.02□□□□□ -0.33
LBR-204ENST00000424022 OTUD5Q96G74 571 aa13.02□□□□□ -0.33
LBR-204ENST00000424022 PPP1R37O75864 691 aa13□□□□□ -0.33
LBR-204ENST00000424022 OCEL1Q9H607 264 aa13□□□□□ -0.33
LBR-204ENST00000424022 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
LBR-204ENST00000424022 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
LBR-204ENST00000424022 P3H3Q8IVL6 736 aa12.98□□□□□ -0.33
LBR-204ENST00000424022 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
LBR-204ENST00000424022 CADPS2Q86UW7 1296 aa12.97□□□□□ -0.33
LBR-204ENST00000424022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
LBR-204ENST00000424022 NBR1Q14596 966 aa12.96□□□□□ -0.33
LBR-204ENST00000424022 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
LBR-204ENST00000424022 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms