RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 GLIPR1L2Q4G1C9 344 aa9.64□□□□□ -0.87
CNOT4-205ENST00000423368 LAS1LQ9Y4W2 734 aaKnown RBP9.64□□□□□ -0.87
CNOT4-205ENST00000423368 TPRNQ4KMQ1 711 aa9.63□□□□□ -0.87
CNOT4-205ENST00000423368 FANCIQ9NVI1 1328 aa9.62□□□□□ -0.87
CNOT4-205ENST00000423368 RBM10P98175 930 aaKnown RBP9.61□□□□□ -0.87
CNOT4-205ENST00000423368 NPM2Q86SE8 214 aaKnown RBP9.59□□□□□ -0.87
CNOT4-205ENST00000423368 NEFMP07197 916 aa9.56□□□□□ -0.88
CNOT4-205ENST00000423368 DCAF8L2P0C7V8 631 aa9.56□□□□□ -0.88
CNOT4-205ENST00000423368 PDIA4P13667 645 aaKnown RBP9.55□□□□□ -0.88
CNOT4-205ENST00000423368 RANGAP1P46060 587 aaPredicted RBP9.54□□□□□ -0.88
CNOT4-205ENST00000423368 FGD1P98174 961 aa9.53□□□□□ -0.88
CNOT4-205ENST00000423368 B4GALNT3Q6L9W6 998 aa9.52□□□□□ -0.89
CNOT4-205ENST00000423368 ARXQ96QS3 562 aa9.52□□□□□ -0.89
CNOT4-205ENST00000423368 ZBTB47Q9UFB7 747 aaPredicted RBP9.52□□□□□ -0.89
CNOT4-205ENST00000423368 SLC4A2P04920 1241 aa9.5□□□□□ -0.89
CNOT4-205ENST00000423368 AAMPQ13685 434 aa9.5□□□□□ -0.89
CNOT4-205ENST00000423368 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
CNOT4-205ENST00000423368 KLHL34Q8N239 644 aa9.48□□□□□ -0.89
CNOT4-205ENST00000423368 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-205ENST00000423368 PAXIP1Q6ZW49 1069 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-205ENST00000423368 KDM2AQ9Y2K7 1162 aa9.47□□□□□ -0.89
CNOT4-205ENST00000423368 ANP32AP39687 249 aaKnown RBP9.46□□□□□ -0.89
CNOT4-205ENST00000423368 HSP90AA2PQ14568 343 aaPredicted RBP9.46□□□□□ -0.89
CNOT4-205ENST00000423368 NAP1L5Q96NT1 182 aaPredicted RBP9.46□□□□□ -0.89
CNOT4-205ENST00000423368 DDX10Q13206 875 aaKnown RBP9.46□□□□□ -0.9
CNOT4-205ENST00000423368 HIRIP3Q9BW71 556 aaPredicted RBP9.46□□□□□ -0.9
CNOT4-205ENST00000423368 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
CNOT4-205ENST00000423368 ARID3AQ99856 593 aa9.43□□□□□ -0.9
CNOT4-205ENST00000423368 SENP3-EIF4A1A0A087X0R7 540 aa9.42□□□□□ -0.9
CNOT4-205ENST00000423368 RGS3P49796 1198 aa9.42□□□□□ -0.9
CNOT4-205ENST00000423368 CHMP4BQ9H444 224 aaKnown RBP9.41□□□□□ -0.9
CNOT4-205ENST00000423368 SIN3AQ96ST3 1273 aa9.4□□□□□ -0.9
CNOT4-205ENST00000423368 FBLN2P98095 1184 aa9.39□□□□□ -0.91
CNOT4-205ENST00000423368 BAZ1BQ9UIG0 1483 aaKnown RBP9.39□□□□□ -0.91
CNOT4-205ENST00000423368 IPO9Q96P70 1041 aaKnown RBP9.38□□□□□ -0.91
CNOT4-205ENST00000423368 RNF216Q9NWF9 866 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-205ENST00000423368 MAPK8IP2Q13387 824 aaPredicted RBP9.37□□□□□ -0.91
CNOT4-205ENST00000423368 USP35Q9P2H5 1018 aa9.37□□□□□ -0.91
CNOT4-205ENST00000423368 HNRNPUQ00839 825 aaKnown RBP eCLIP9.37□□□□□ -0.91
CNOT4-205ENST00000423368 FRAT1Q92837 279 aaPredicted RBP9.36□□□□□ -0.91
CNOT4-205ENST00000423368 SLC4A3P48751 1232 aa9.35□□□□□ -0.91
CNOT4-205ENST00000423368 MYCNP04198 464 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-205ENST00000423368 HSP90AA1P07900 732 aaKnown RBP9.34□□□□□ -0.91
CNOT4-205ENST00000423368 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.91
CNOT4-205ENST00000423368 BBXQ8WY36 941 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-205ENST00000423368 CNGB1Q14028 1251 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-205ENST00000423368 GSE1Q14687 1217 aa9.34□□□□□ -0.91
CNOT4-205ENST00000423368 DHX37Q8IY37 1157 aaKnown RBP9.33□□□□□ -0.92
CNOT4-205ENST00000423368 DCAF11Q8TEB1 546 aa9.32□□□□□ -0.92
CNOT4-205ENST00000423368 NAP1L2Q9ULW6 460 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-205ENST00000423368 RRAGDQ9NQL2 400 aaPredicted RBP9.28□□□□□ -0.92
CNOT4-205ENST00000423368 PPP4R2Q9NY27 417 aa9.28□□□□□ -0.92
CNOT4-205ENST00000423368 WASHC2AQ641Q2 1341 aa9.28□□□□□ -0.92
CNOT4-205ENST00000423368 ZHX1Q9UKY1 873 aaPredicted RBP9.27□□□□□ -0.92
CNOT4-205ENST00000423368 VGLL3A8MV65 326 aa9.26□□□□□ -0.93
CNOT4-205ENST00000423368 PKD2Q13563 968 aa9.25□□□□□ -0.93
CNOT4-205ENST00000423368 PNNQ9H307 717 aaKnown RBP9.25□□□□□ -0.93
CNOT4-205ENST00000423368 WASHC2CQ9Y4E1 1318 aa9.25□□□□□ -0.93
CNOT4-205ENST00000423368 ATF5Q9Y2D1 282 aaPredicted RBP9.23□□□□□ -0.93
CNOT4-205ENST00000423368 FAM43AQ8N2R8 423 aa9.23□□□□□ -0.93
CNOT4-205ENST00000423368 ANP32CO43423 234 aa9.22□□□□□ -0.93
CNOT4-205ENST00000423368 RRP9O43818 475 aaKnown RBP9.22□□□□□ -0.93
CNOT4-205ENST00000423368 NFKBIBQ15653 356 aa9.22□□□□□ -0.93
CNOT4-205ENST00000423368 TAF7LQ5H9L4 462 aa9.22□□□□□ -0.93
CNOT4-205ENST00000423368 PRDM10Q9NQV6 1147 aa9.22□□□□□ -0.93
CNOT4-205ENST00000423368 IFNLR1Q8IU57 520 aaPredicted RBP9.19□□□□□ -0.94
CNOT4-205ENST00000423368 HOMEZQ8IX15 550 aa9.18□□□□□ -0.94
CNOT4-205ENST00000423368 FRAT2O75474 233 aaPredicted RBP9.18□□□□□ -0.94
CNOT4-205ENST00000423368 FAM9BQ8IZU0 186 aa9.18□□□□□ -0.94
CNOT4-205ENST00000423368 PPM1GO15355 546 aaPredicted RBP9.18□□□□□ -0.94
CNOT4-205ENST00000423368 SKAP1Q86WV1 359 aa9.18□□□□□ -0.94
CNOT4-205ENST00000423368 CANXP27824 592 aaKnown RBP9.17□□□□□ -0.94
CNOT4-205ENST00000423368 FBXO3Q9UK99 471 aa9.17□□□□□ -0.94
CNOT4-205ENST00000423368 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
CNOT4-205ENST00000423368 UBTFP17480 764 aaKnown RBP9.16□□□□□ -0.94
CNOT4-205ENST00000423368 GTF2E1P29083 439 aaPredicted RBP9.16□□□□□ -0.94
CNOT4-205ENST00000423368 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
CNOT4-205ENST00000423368 PRDM4Q9UKN5 801 aa9.14□□□□□ -0.95
CNOT4-205ENST00000423368 GZF1Q9H116 711 aaPredicted RBP9.14□□□□□ -0.95
CNOT4-205ENST00000423368 E9PSI1 815 aa9.13□□□□□ -0.95
CNOT4-205ENST00000423368 TMEM132AQ24JP5 1023 aa9.13□□□□□ -0.95
CNOT4-205ENST00000423368 CHMP4AQ9BY43 222 aa9.13□□□□□ -0.95
CNOT4-205ENST00000423368 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
CNOT4-205ENST00000423368 HOXD11P31277 338 aaPredicted RBP9.12□□□□□ -0.95
CNOT4-205ENST00000423368 FAM13BQ9NYF5 915 aa9.12□□□□□ -0.95
CNOT4-205ENST00000423368 POGKQ9P215 609 aa9.11□□□□□ -0.95
CNOT4-205ENST00000423368 STAC3Q96MF2 364 aa9.11□□□□□ -0.95
CNOT4-205ENST00000423368 ZBTB7CA1YPR0 619 aa9.1□□□□□ -0.95
CNOT4-205ENST00000423368 ZFP91Q96JP5 570 aaPredicted RBP9.08□□□□□ -0.96
CNOT4-205ENST00000423368 PANK2Q9BZ23 570 aa9.08□□□□□ -0.96
CNOT4-205ENST00000423368 CERS3Q8IU89 383 aa9.07□□□□□ -0.96
CNOT4-205ENST00000423368 PDE4AP27815 886 aa9.07□□□□□ -0.96
CNOT4-205ENST00000423368 ZNF830Q96NB3 372 aaPredicted RBP9.06□□□□□ -0.96
CNOT4-205ENST00000423368 ANP32BQ92688 251 aaKnown RBP9.05□□□□□ -0.96
CNOT4-205ENST00000423368 CCDC184Q52MB2 194 aa9.04□□□□□ -0.96
CNOT4-205ENST00000423368 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
CNOT4-205ENST00000423368 CALD1Q05682 793 aaKnown RBP9.04□□□□□ -0.96
CNOT4-205ENST00000423368 AEBP1Q8IUX7 1158 aa9.03□□□□□ -0.96
CNOT4-205ENST00000423368 PROM2Q8N271 834 aa9.03□□□□□ -0.96
CNOT4-205ENST00000423368 SLKQ9H2G2 1235 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms