RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 DCAF8L2P0C7V8 631 aa9.85□□□□□ -0.83
CDC42EP3-202ENST00000422687 UNC13AQ9UPW8 1703 aa9.84□□□□□ -0.83
CDC42EP3-202ENST00000422687 PLCD3Q8N3E9 789 aa9.83□□□□□ -0.84
CDC42EP3-202ENST00000422687 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
CDC42EP3-202ENST00000422687 PLSCR2Q9NRY7 297 aa9.81□□□□□ -0.84
CDC42EP3-202ENST00000422687 ZBTB47Q9UFB7 747 aaPredicted RBP9.81□□□□□ -0.84
CDC42EP3-202ENST00000422687 ZNF579Q8NAF0 562 aaKnown RBP9.79□□□□□ -0.84
CDC42EP3-202ENST00000422687 CLCN6P51797 869 aa9.77□□□□□ -0.85
CDC42EP3-202ENST00000422687 SHROOM4Q9ULL8 1493 aa9.77□□□□□ -0.85
CDC42EP3-202ENST00000422687 PAK3O75914 559 aaPredicted RBP9.76□□□□□ -0.85
CDC42EP3-202ENST00000422687 ZRANB1Q9UGI0 708 aa9.76□□□□□ -0.85
CDC42EP3-202ENST00000422687 DCAF1Q9Y4B6 1507 aa9.72□□□□□ -0.85
CDC42EP3-202ENST00000422687 NUBP1P53384 320 aa9.71□□□□□ -0.86
CDC42EP3-202ENST00000422687 PKD2Q13563 968 aa9.7□□□□□ -0.86
CDC42EP3-202ENST00000422687 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
CDC42EP3-202ENST00000422687 POTEIP0CG38 1075 aa9.69□□□□□ -0.86
CDC42EP3-202ENST00000422687 PLCB2Q00722 1185 aa9.69□□□□□ -0.86
CDC42EP3-202ENST00000422687 ZCCHC6Q5VYS8 1495 aaKnown RBP9.69□□□□□ -0.86
CDC42EP3-202ENST00000422687 CCDC61Q9Y6R9 512 aa9.68□□□□□ -0.86
CDC42EP3-202ENST00000422687 CECR2Q9BXF3 1484 aa9.67□□□□□ -0.86
CDC42EP3-202ENST00000422687 TSPYL2Q9H2G4 693 aaPredicted RBP9.66□□□□□ -0.86
CDC42EP3-202ENST00000422687 CC2D2AQ9P2K1 1620 aa9.66□□□□□ -0.86
CDC42EP3-202ENST00000422687 PHF12Q96QT6 1004 aa9.65□□□□□ -0.86
CDC42EP3-202ENST00000422687 FAM212AQ96EL1 285 aa9.63□□□□□ -0.87
CDC42EP3-202ENST00000422687 EIF4G1Q04637 1599 aaKnown RBP9.62□□□□□ -0.87
CDC42EP3-202ENST00000422687 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
CDC42EP3-202ENST00000422687 GALR2O43603 387 aaPredicted RBP9.59□□□□□ -0.87
CDC42EP3-202ENST00000422687 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
CDC42EP3-202ENST00000422687 KIF12Q96FN5 646 aa9.59□□□□□ -0.87
CDC42EP3-202ENST00000422687 SCRIBQ14160 1630 aa9.56□□□□□ -0.88
CDC42EP3-202ENST00000422687 MS4A3Q96HJ5 214 aa9.56□□□□□ -0.88
CDC42EP3-202ENST00000422687 SGIP1Q9BQI5 828 aa9.54□□□□□ -0.88
CDC42EP3-202ENST00000422687 GSE1Q14687 1217 aa9.53□□□□□ -0.88
CDC42EP3-202ENST00000422687 DNAJC5Q9H3Z4 198 aa9.53□□□□□ -0.88
CDC42EP3-202ENST00000422687 MAP3K13O43283 966 aa9.52□□□□□ -0.89
CDC42EP3-202ENST00000422687 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
CDC42EP3-202ENST00000422687 DCAF8Q5TAQ9 597 aa9.51□□□□□ -0.89
CDC42EP3-202ENST00000422687 ECM2O94769 699 aaPredicted RBP9.48□□□□□ -0.89
CDC42EP3-202ENST00000422687 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
CDC42EP3-202ENST00000422687 ASTLQ6HA08 431 aaPredicted RBP9.47□□□□□ -0.89
CDC42EP3-202ENST00000422687 PCDHB13Q9Y5F0 798 aa9.46□□□□□ -0.9
CDC42EP3-202ENST00000422687 CHRM1P11229 460 aaPredicted RBP9.45□□□□□ -0.9
CDC42EP3-202ENST00000422687 BBXQ8WY36 941 aaPredicted RBP9.45□□□□□ -0.9
CDC42EP3-202ENST00000422687 OTUD5Q96G74 571 aa9.45□□□□□ -0.9
CDC42EP3-202ENST00000422687 POTEMA6NI47 508 aa9.44□□□□□ -0.9
CDC42EP3-202ENST00000422687 TIE1P35590 1138 aa9.44□□□□□ -0.9
CDC42EP3-202ENST00000422687 ATMINO43313 823 aaPredicted RBP9.43□□□□□ -0.9
CDC42EP3-202ENST00000422687 PYGBP11216 843 aa9.43□□□□□ -0.9
CDC42EP3-202ENST00000422687 IFNL1Q8IU54 200 aa9.43□□□□□ -0.9
CDC42EP3-202ENST00000422687 TRPC6Q9Y210 931 aa9.43□□□□□ -0.9
CDC42EP3-202ENST00000422687 VSIG10Q8N0Z9 540 aa9.42□□□□□ -0.9
CDC42EP3-202ENST00000422687 RGL2O15211 777 aa9.41□□□□□ -0.9
CDC42EP3-202ENST00000422687 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
CDC42EP3-202ENST00000422687 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
CDC42EP3-202ENST00000422687 POTEGQ6S5H5 508 aa9.39□□□□□ -0.91
CDC42EP3-202ENST00000422687 CIZ1Q9ULV3 898 aaPredicted RBP9.39□□□□□ -0.91
CDC42EP3-202ENST00000422687 ZNF467Q7Z7K2 595 aaPredicted RBP9.38□□□□□ -0.91
CDC42EP3-202ENST00000422687 PELP1Q8IZL8 1130 aaKnown RBP9.38□□□□□ -0.91
CDC42EP3-202ENST00000422687 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
CDC42EP3-202ENST00000422687 TTLL13PA6NNM8 815 aa9.37□□□□□ -0.91
CDC42EP3-202ENST00000422687 POTEB2H3BUK9 544 aa9.37□□□□□ -0.91
CDC42EP3-202ENST00000422687 ATN1P54259 1190 aaPredicted RBP9.37□□□□□ -0.91
CDC42EP3-202ENST00000422687 SLC39A7Q92504 469 aa9.34□□□□□ -0.91
CDC42EP3-202ENST00000422687 PCDHB8Q9UN66 801 aa9.34□□□□□ -0.91
CDC42EP3-202ENST00000422687 CUX2O14529 1486 aa9.34□□□□□ -0.91
CDC42EP3-202ENST00000422687 PCDH10Q9P2E7 1040 aa9.33□□□□□ -0.92
CDC42EP3-202ENST00000422687 C7P10643 843 aa9.32□□□□□ -0.92
CDC42EP3-202ENST00000422687 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
CDC42EP3-202ENST00000422687 BCANQ96GW7 911 aa9.32□□□□□ -0.92
CDC42EP3-202ENST00000422687 TMEM106CQ9BVX2 250 aa9.31□□□□□ -0.92
CDC42EP3-202ENST00000422687 METRNQ9UJH8 293 aa9.31□□□□□ -0.92
CDC42EP3-202ENST00000422687 NCAPD3P42695 1498 aa9.31□□□□□ -0.92
CDC42EP3-202ENST00000422687 TRIM35Q9UPQ4 493 aa9.3□□□□□ -0.92
CDC42EP3-202ENST00000422687 KDM2AQ9Y2K7 1162 aa9.3□□□□□ -0.92
CDC42EP3-202ENST00000422687 IER5LQ5T953 404 aa9.29□□□□□ -0.92
CDC42EP3-202ENST00000422687 PDAP1Q13442 181 aaKnown RBP9.27□□□□□ -0.93
CDC42EP3-202ENST00000422687 SPRYD3Q8NCJ5 442 aa9.26□□□□□ -0.93
CDC42EP3-202ENST00000422687 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
CDC42EP3-202ENST00000422687 PSEN1P49768 467 aa9.25□□□□□ -0.93
CDC42EP3-202ENST00000422687 ATAD2BQ9ULI0 1458 aa9.24□□□□□ -0.93
CDC42EP3-202ENST00000422687 POTEFA5A3E0 1075 aa9.24□□□□□ -0.93
CDC42EP3-202ENST00000422687 CHGAP10645 457 aaKnown RBP9.24□□□□□ -0.93
CDC42EP3-202ENST00000422687 RNF25Q96BH1 459 aaPredicted RBP9.24□□□□□ -0.93
CDC42EP3-202ENST00000422687 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
CDC42EP3-202ENST00000422687 HS6ST3Q8IZP7 471 aa9.23□□□□□ -0.93
CDC42EP3-202ENST00000422687 RIOK3O14730 519 aaKnown RBP9.21□□□□□ -0.94
CDC42EP3-202ENST00000422687 HMGXB3Q12766 1538 aa9.21□□□□□ -0.94
CDC42EP3-202ENST00000422687 IRX5P78411 483 aaPredicted RBP9.19□□□□□ -0.94
CDC42EP3-202ENST00000422687 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
CDC42EP3-202ENST00000422687 TAOK2Q9UL54 1235 aa9.19□□□□□ -0.94
CDC42EP3-202ENST00000422687 COLQQ9Y215 455 aaPredicted RBP9.19□□□□□ -0.94
CDC42EP3-202ENST00000422687 SMARCA2P51531 1590 aa9.18□□□□□ -0.94
CDC42EP3-202ENST00000422687 VGFO15240 615 aaPredicted RBP9.17□□□□□ -0.94
CDC42EP3-202ENST00000422687 SEC24BO95487 1268 aa9.16□□□□□ -0.94
CDC42EP3-202ENST00000422687 NESP48681 1621 aa9.16□□□□□ -0.94
CDC42EP3-202ENST00000422687 POTEJP0CG39 1038 aa9.15□□□□□ -0.94
CDC42EP3-202ENST00000422687 SMARCA4P51532 1647 aa9.15□□□□□ -0.94
CDC42EP3-202ENST00000422687 PLCG2P16885 1265 aa9.14□□□□□ -0.95
CDC42EP3-202ENST00000422687 LCE2DQ5TA82 110 aaPredicted RBP9.14□□□□□ -0.95
CDC42EP3-202ENST00000422687 ILDR1Q86SU0 546 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms