RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
CCR9-204ENST00000422395 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.56
CCR9-204ENST00000422395 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
CCR9-204ENST00000422395 CECR2Q9BXF3 1484 aa11.56□□□□□ -0.56
CCR9-204ENST00000422395 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
CCR9-204ENST00000422395 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCR9-204ENST00000422395 HRCP23327 699 aa11.51□□□□□ -0.57
CCR9-204ENST00000422395 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
CCR9-204ENST00000422395 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
CCR9-204ENST00000422395 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
CCR9-204ENST00000422395 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
CCR9-204ENST00000422395 MYT1Q01538 1121 aa11.31□□□□□ -0.6
CCR9-204ENST00000422395 TSPYL2Q9H2G4 693 aaPredicted RBP11.29□□□□□ -0.6
CCR9-204ENST00000422395 MNX1P50219 401 aaPredicted RBP11.28□□□□□ -0.6
CCR9-204ENST00000422395 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
CCR9-204ENST00000422395 SLC39A7Q92504 469 aa11.23□□□□□ -0.61
CCR9-204ENST00000422395 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
CCR9-204ENST00000422395 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
CCR9-204ENST00000422395 C7P10643 843 aa11.21□□□□□ -0.61
CCR9-204ENST00000422395 MIER1Q8N108 512 aa11.19□□□□□ -0.62
CCR9-204ENST00000422395 ASTLQ6HA08 431 aaPredicted RBP11.18□□□□□ -0.62
CCR9-204ENST00000422395 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
CCR9-204ENST00000422395 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
CCR9-204ENST00000422395 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
CCR9-204ENST00000422395 SMARCA4P51532 1647 aa11.15□□□□□ -0.62
CCR9-204ENST00000422395 NCAPD3P42695 1498 aa11.15□□□□□ -0.63
CCR9-204ENST00000422395 PROM2Q8N271 834 aa11.13□□□□□ -0.63
CCR9-204ENST00000422395 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
CCR9-204ENST00000422395 HMGXB3Q12766 1538 aa11.12□□□□□ -0.63
CCR9-204ENST00000422395 POTEMA6NI47 508 aa11.11□□□□□ -0.63
CCR9-204ENST00000422395 ZEB1P37275 1124 aaPredicted RBP11.11□□□□□ -0.63
CCR9-204ENST00000422395 PLCD3Q8N3E9 789 aa11.11□□□□□ -0.63
CCR9-204ENST00000422395 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
CCR9-204ENST00000422395 CCDC61Q9Y6R9 512 aa11.11□□□□□ -0.63
CCR9-204ENST00000422395 ERCC6Q03468 1493 aa11.11□□□□□ -0.63
CCR9-204ENST00000422395 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
CCR9-204ENST00000422395 CUX2O14529 1486 aa11.09□□□□□ -0.63
CCR9-204ENST00000422395 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
CCR9-204ENST00000422395 BAZ1AQ9NRL2 1556 aaPredicted RBP11.08□□□□□ -0.64
CCR9-204ENST00000422395 ATN1P54259 1190 aaPredicted RBP11.08□□□□□ -0.64
CCR9-204ENST00000422395 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
CCR9-204ENST00000422395 DNAJC5Q9H3Z4 198 aa11.06□□□□□ -0.64
CCR9-204ENST00000422395 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
CCR9-204ENST00000422395 PCGF6Q9BYE7 350 aa11.05□□□□□ -0.64
CCR9-204ENST00000422395 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
CCR9-204ENST00000422395 SEC24BO95487 1268 aa11.04□□□□□ -0.64
CCR9-204ENST00000422395 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
CCR9-204ENST00000422395 MAP3K13O43283 966 aa11.03□□□□□ -0.64
CCR9-204ENST00000422395 BMP2KQ9NSY1 1161 aaPredicted RBP11.03□□□□□ -0.64
CCR9-204ENST00000422395 TIE1P35590 1138 aa11.02□□□□□ -0.65
CCR9-204ENST00000422395 SUPT5HO00267 1087 aaKnown RBP11.01□□□□□ -0.65
CCR9-204ENST00000422395 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
CCR9-204ENST00000422395 NESP48681 1621 aa11.01□□□□□ -0.65
CCR9-204ENST00000422395 FAM163AQ96GL9 167 aaPredicted RBP11□□□□□ -0.65
CCR9-204ENST00000422395 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
CCR9-204ENST00000422395 POTEJP0CG39 1038 aa10.96□□□□□ -0.65
CCR9-204ENST00000422395 MROH2BQ7Z745 1585 aa10.96□□□□□ -0.65
CCR9-204ENST00000422395 PCDHB13Q9Y5F0 798 aa10.96□□□□□ -0.65
CCR9-204ENST00000422395 LAMC3Q9Y6N6 1575 aa10.96□□□□□ -0.65
CCR9-204ENST00000422395 THOC2Q8NI27 1593 aaKnown RBP10.95□□□□□ -0.66
CCR9-204ENST00000422395 TRIM26Q12899 539 aaPredicted RBP10.95□□□□□ -0.66
CCR9-204ENST00000422395 TRPC6Q9Y210 931 aa10.95□□□□□ -0.66
CCR9-204ENST00000422395 KIF21AQ7Z4S6 1674 aa10.95□□□□□ -0.66
CCR9-204ENST00000422395 TTLL13PA6NNM8 815 aa10.93□□□□□ -0.66
CCR9-204ENST00000422395 FAM212AQ96EL1 285 aa10.93□□□□□ -0.66
CCR9-204ENST00000422395 FKBP8Q14318 412 aa10.92□□□□□ -0.66
CCR9-204ENST00000422395 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
CCR9-204ENST00000422395 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
CCR9-204ENST00000422395 IER5LQ5T953 404 aa10.88□□□□□ -0.67
CCR9-204ENST00000422395 PPARGC1BQ86YN6 1023 aaKnown RBP10.87□□□□□ -0.67
CCR9-204ENST00000422395 WIZO95785 1651 aa10.87□□□□□ -0.67
CCR9-204ENST00000422395 PDS5BQ9NTI5 1447 aa10.87□□□□□ -0.67
CCR9-204ENST00000422395 COLQQ9Y215 455 aaPredicted RBP10.85□□□□□ -0.67
CCR9-204ENST00000422395 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
CCR9-204ENST00000422395 PLCG2P16885 1265 aa10.84□□□□□ -0.67
CCR9-204ENST00000422395 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
CCR9-204ENST00000422395 NUBP1P53384 320 aa10.83□□□□□ -0.68
CCR9-204ENST00000422395 IFNL1Q8IU54 200 aa10.82□□□□□ -0.68
CCR9-204ENST00000422395 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
CCR9-204ENST00000422395 CADPSQ9ULU8 1353 aa10.8□□□□□ -0.68
CCR9-204ENST00000422395 MRC2Q9UBG0 1479 aa10.79□□□□□ -0.68
CCR9-204ENST00000422395 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
CCR9-204ENST00000422395 WDR62O43379 1518 aa10.78□□□□□ -0.68
CCR9-204ENST00000422395 LCE2DQ5TA82 110 aaPredicted RBP10.76□□□□□ -0.69
CCR9-204ENST00000422395 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
CCR9-204ENST00000422395 CEP164Q9UPV0 1460 aa10.75□□□□□ -0.69
CCR9-204ENST00000422395 TOP2AP11388 1531 aaKnown RBP10.72□□□□□ -0.69
CCR9-204ENST00000422395 PYGBP11216 843 aa10.72□□□□□ -0.69
CCR9-204ENST00000422395 PRDM2Q13029 1718 aa10.72□□□□□ -0.69
CCR9-204ENST00000422395 FANCD2Q9BXW9 1451 aa10.71□□□□□ -0.69
CCR9-204ENST00000422395 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
CCR9-204ENST00000422395 CDAN1Q8IWY9 1227 aa10.7□□□□□ -0.7
CCR9-204ENST00000422395 KLHL34Q8N239 644 aa10.7□□□□□ -0.7
CCR9-204ENST00000422395 GOLGA2Q08379 1002 aa10.69□□□□□ -0.7
CCR9-204ENST00000422395 CFTRP13569 1480 aa10.69□□□□□ -0.7
CCR9-204ENST00000422395 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
CCR9-204ENST00000422395 OCEL1Q9H607 264 aa10.68□□□□□ -0.7
CCR9-204ENST00000422395 TTBK1Q5TCY1 1321 aaPredicted RBP10.68□□□□□ -0.7
CCR9-204ENST00000422395 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.66□□□□□ -0.7
CCR9-204ENST00000422395 SNPHO15079 494 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms