RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 CLSTN1O94985 981 aa17.96■□□□□ 0.47
COL20A1-203ENST00000422202 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
COL20A1-203ENST00000422202 TRHP20396 242 aaPredicted RBP17.93■□□□□ 0.46
COL20A1-203ENST00000422202 DNTTIP2Q5QJE6 756 aaKnown RBP17.93■□□□□ 0.46
COL20A1-203ENST00000422202 PTMAP06454 111 aaKnown RBP17.91■□□□□ 0.46
COL20A1-203ENST00000422202 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
COL20A1-203ENST00000422202 TNNT2P45379 298 aaPredicted RBP17.88■□□□□ 0.45
COL20A1-203ENST00000422202 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
COL20A1-203ENST00000422202 CASC1Q6TDU7 716 aa17.87■□□□□ 0.45
COL20A1-203ENST00000422202 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
COL20A1-203ENST00000422202 GOLGA6L22H0YM25 854 aa17.85■□□□□ 0.45
COL20A1-203ENST00000422202 BECN1Q14457 450 aa17.85■□□□□ 0.45
COL20A1-203ENST00000422202 LMOD2Q6P5Q4 547 aa17.84■□□□□ 0.45
COL20A1-203ENST00000422202 GOLGA2Q08379 1002 aa17.84■□□□□ 0.45
COL20A1-203ENST00000422202 IRX6P78412 446 aaPredicted RBP17.83■□□□□ 0.44
COL20A1-203ENST00000422202 NAP1L2Q9ULW6 460 aaPredicted RBP17.82■□□□□ 0.44
COL20A1-203ENST00000422202 LAS1LQ9Y4W2 734 aaKnown RBP17.81■□□□□ 0.44
COL20A1-203ENST00000422202 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
COL20A1-203ENST00000422202 PLCB2Q00722 1185 aa17.79■□□□□ 0.44
COL20A1-203ENST00000422202 PRM3Q9NNZ6 103 aa17.77■□□□□ 0.44
COL20A1-203ENST00000422202 ISY1Q9ULR0 285 aaKnown RBP17.76■□□□□ 0.43
COL20A1-203ENST00000422202 MRS2Q9HD23 443 aa17.75■□□□□ 0.43
COL20A1-203ENST00000422202 FGD1P98174 961 aa17.75■□□□□ 0.43
COL20A1-203ENST00000422202 FTSJ3Q8IY81 847 aaKnown RBP17.74■□□□□ 0.43
COL20A1-203ENST00000422202 TSPY4P0CV99 314 aa17.72■□□□□ 0.43
COL20A1-203ENST00000422202 TSPY10P0CW01 314 aa17.72■□□□□ 0.43
COL20A1-203ENST00000422202 DDRGK1Q96HY6 314 aa17.72■□□□□ 0.43
COL20A1-203ENST00000422202 OS9Q13438 667 aaPredicted RBP17.72■□□□□ 0.43
COL20A1-203ENST00000422202 GOLGA6L6A8MZA4 724 aa17.71■□□□□ 0.43
COL20A1-203ENST00000422202 KCNH8Q96L42 1107 aa17.68■□□□□ 0.42
COL20A1-203ENST00000422202 KCNJ4P48050 445 aa17.67■□□□□ 0.42
COL20A1-203ENST00000422202 SENP3-EIF4A1A0A087X0R7 540 aa17.67■□□□□ 0.42
COL20A1-203ENST00000422202 ANP32EQ9BTT0 268 aa17.66■□□□□ 0.42
COL20A1-203ENST00000422202 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
COL20A1-203ENST00000422202 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
COL20A1-203ENST00000422202 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
COL20A1-203ENST00000422202 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
COL20A1-203ENST00000422202 RGL3Q3MIN7 710 aa17.6■□□□□ 0.41
COL20A1-203ENST00000422202 NAP1L5Q96NT1 182 aaPredicted RBP17.59■□□□□ 0.41
COL20A1-203ENST00000422202 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
COL20A1-203ENST00000422202 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
COL20A1-203ENST00000422202 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
COL20A1-203ENST00000422202 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
COL20A1-203ENST00000422202 NRDCO43847 1150 aa17.55■□□□□ 0.4
COL20A1-203ENST00000422202 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
COL20A1-203ENST00000422202 DRC7Q8IY82 874 aa17.54■□□□□ 0.4
COL20A1-203ENST00000422202 NOC3LQ8WTT2 800 aaKnown RBP17.54■□□□□ 0.4
COL20A1-203ENST00000422202 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
COL20A1-203ENST00000422202 GNL2Q13823 731 aaKnown RBP17.52■□□□□ 0.4
COL20A1-203ENST00000422202 KNSTRNQ9Y448 316 aa17.52■□□□□ 0.4
COL20A1-203ENST00000422202 GOLGA6L4A6NEF3 574 aa17.52■□□□□ 0.4
COL20A1-203ENST00000422202 POGKQ9P215 609 aa17.51■□□□□ 0.39
COL20A1-203ENST00000422202 MTUS2Q5JR59 1369 aa17.51■□□□□ 0.39
COL20A1-203ENST00000422202 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
COL20A1-203ENST00000422202 SOX12O15370 315 aa17.5■□□□□ 0.39
COL20A1-203ENST00000422202 RRP7BPQ9NSQ0 103 aa17.49■□□□□ 0.39
COL20A1-203ENST00000422202 PDE4CQ08493 712 aa17.49■□□□□ 0.39
COL20A1-203ENST00000422202 FRAT1Q92837 279 aaPredicted RBP17.48■□□□□ 0.39
COL20A1-203ENST00000422202 ERICH6BQ5W0A0 696 aa17.47■□□□□ 0.39
COL20A1-203ENST00000422202 CHAF1AQ13111 956 aaPredicted RBP17.47■□□□□ 0.39
COL20A1-203ENST00000422202 EIF4G2P78344 907 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL20A1-203ENST00000422202 PNNQ9H307 717 aaKnown RBP17.46■□□□□ 0.39
COL20A1-203ENST00000422202 TMX4Q9H1E5 349 aaPredicted RBP17.46■□□□□ 0.39
COL20A1-203ENST00000422202 RTN4Q9NQC3 1192 aaKnown RBP17.44■□□□□ 0.38
COL20A1-203ENST00000422202 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
COL20A1-203ENST00000422202 L1TD1Q5T7N2 865 aaKnown RBP17.44■□□□□ 0.38
COL20A1-203ENST00000422202 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
COL20A1-203ENST00000422202 ANO8Q9HCE9 1232 aaPredicted RBP17.44■□□□□ 0.38
COL20A1-203ENST00000422202 KRI1Q8N9T8 703 aaKnown RBP17.43■□□□□ 0.38
COL20A1-203ENST00000422202 MLECQ14165 292 aa17.42■□□□□ 0.38
COL20A1-203ENST00000422202 NUDCQ9Y266 331 aa17.42■□□□□ 0.38
COL20A1-203ENST00000422202 RGS3P49796 1198 aa17.42■□□□□ 0.38
COL20A1-203ENST00000422202 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
COL20A1-203ENST00000422202 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.39■□□□□ 0.37
COL20A1-203ENST00000422202 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
COL20A1-203ENST00000422202 SPRYD3Q8NCJ5 442 aa17.37■□□□□ 0.37
COL20A1-203ENST00000422202 G3V3G9 751 aa17.37■□□□□ 0.37
COL20A1-203ENST00000422202 DCAF8Q5TAQ9 597 aa17.37■□□□□ 0.37
COL20A1-203ENST00000422202 A0A0U1RQG5 324 aaPredicted RBP17.36■□□□□ 0.37
COL20A1-203ENST00000422202 MCCP23508 829 aa17.36■□□□□ 0.37
COL20A1-203ENST00000422202 CC2D1BQ5T0F9 858 aaKnown RBP17.35■□□□□ 0.37
COL20A1-203ENST00000422202 MSNP26038 577 aaKnown RBP17.34■□□□□ 0.37
COL20A1-203ENST00000422202 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
COL20A1-203ENST00000422202 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
COL20A1-203ENST00000422202 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
COL20A1-203ENST00000422202 HSCBQ8IWL3 235 aa17.31■□□□□ 0.36
COL20A1-203ENST00000422202 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
COL20A1-203ENST00000422202 PLEKHD1A6NEE1 506 aa17.31■□□□□ 0.36
COL20A1-203ENST00000422202 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
COL20A1-203ENST00000422202 RTF1Q92541 710 aaKnown RBP17.3■□□□□ 0.36
COL20A1-203ENST00000422202 CARD11Q9BXL7 1154 aa17.3■□□□□ 0.36
COL20A1-203ENST00000422202 SUPT16HQ9Y5B9 1047 aaKnown RBP17.29■□□□□ 0.36
COL20A1-203ENST00000422202 APBB1O00213 710 aa17.28■□□□□ 0.36
COL20A1-203ENST00000422202 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
COL20A1-203ENST00000422202 CREBRFQ8IUR6 639 aa17.28■□□□□ 0.36
COL20A1-203ENST00000422202 KIAA1211Q6ZU35 1233 aa17.27■□□□□ 0.36
COL20A1-203ENST00000422202 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
COL20A1-203ENST00000422202 CHMP3Q9Y3E7 222 aa17.26■□□□□ 0.35
COL20A1-203ENST00000422202 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
COL20A1-203ENST00000422202 MIER1Q8N108 512 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms