RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
EPHA4-205ENST00000419964 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
EPHA4-205ENST00000419964 RGL2O15211 777 aa13.15□□□□□ -0.3
EPHA4-205ENST00000419964 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
EPHA4-205ENST00000419964 SLC24A1O60721 1099 aa13.12□□□□□ -0.31
EPHA4-205ENST00000419964 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
EPHA4-205ENST00000419964 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
EPHA4-205ENST00000419964 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
EPHA4-205ENST00000419964 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
EPHA4-205ENST00000419964 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
EPHA4-205ENST00000419964 PYGBP11216 843 aa12.99□□□□□ -0.33
EPHA4-205ENST00000419964 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
EPHA4-205ENST00000419964 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
EPHA4-205ENST00000419964 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
EPHA4-205ENST00000419964 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
EPHA4-205ENST00000419964 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
EPHA4-205ENST00000419964 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
EPHA4-205ENST00000419964 VGFO15240 615 aaPredicted RBP12.92□□□□□ -0.34
EPHA4-205ENST00000419964 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
EPHA4-205ENST00000419964 HS6ST3Q8IZP7 471 aa12.91□□□□□ -0.34
EPHA4-205ENST00000419964 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
EPHA4-205ENST00000419964 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
EPHA4-205ENST00000419964 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
EPHA4-205ENST00000419964 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
EPHA4-205ENST00000419964 STK25O00506 426 aa12.83□□□□□ -0.36
EPHA4-205ENST00000419964 SHROOM4Q9ULL8 1493 aa12.81□□□□□ -0.36
EPHA4-205ENST00000419964 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
EPHA4-205ENST00000419964 DNAJC5Q9H3Z4 198 aa12.81□□□□□ -0.36
EPHA4-205ENST00000419964 NACADO15069 1562 aa12.81□□□□□ -0.36
EPHA4-205ENST00000419964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
EPHA4-205ENST00000419964 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
EPHA4-205ENST00000419964 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
EPHA4-205ENST00000419964 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
EPHA4-205ENST00000419964 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
EPHA4-205ENST00000419964 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
EPHA4-205ENST00000419964 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
EPHA4-205ENST00000419964 PCDHB13Q9Y5F0 798 aa12.78□□□□□ -0.36
EPHA4-205ENST00000419964 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
EPHA4-205ENST00000419964 HAP1P54257 671 aaPredicted RBP12.77□□□□□ -0.37
EPHA4-205ENST00000419964 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
EPHA4-205ENST00000419964 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
EPHA4-205ENST00000419964 MAP3K13O43283 966 aa12.76□□□□□ -0.37
EPHA4-205ENST00000419964 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
EPHA4-205ENST00000419964 ABCC9O60706 1549 aa12.74□□□□□ -0.37
EPHA4-205ENST00000419964 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
EPHA4-205ENST00000419964 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
EPHA4-205ENST00000419964 PSEN1P49768 467 aa12.7□□□□□ -0.38
EPHA4-205ENST00000419964 HAX1O00165 279 aa12.67□□□□□ -0.38
EPHA4-205ENST00000419964 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
EPHA4-205ENST00000419964 RYDENQ9NUL5 291 aaKnown RBP12.66□□□□□ -0.38
EPHA4-205ENST00000419964 RB1CC1Q8TDY2 1594 aa12.65□□□□□ -0.38
EPHA4-205ENST00000419964 GTPBP6O43824 516 aaPredicted RBP12.61□□□□□ -0.39
EPHA4-205ENST00000419964 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
EPHA4-205ENST00000419964 MS4A3Q96HJ5 214 aa12.58□□□□□ -0.4
EPHA4-205ENST00000419964 CLCN6P51797 869 aa12.57□□□□□ -0.4
EPHA4-205ENST00000419964 SCRIBQ14160 1630 aa12.55□□□□□ -0.4
EPHA4-205ENST00000419964 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
EPHA4-205ENST00000419964 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
EPHA4-205ENST00000419964 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
EPHA4-205ENST00000419964 EVX2Q03828 476 aa12.5□□□□□ -0.41
EPHA4-205ENST00000419964 SOX12O15370 315 aa12.49□□□□□ -0.41
EPHA4-205ENST00000419964 TIE1P35590 1138 aa12.49□□□□□ -0.41
EPHA4-205ENST00000419964 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
EPHA4-205ENST00000419964 POTEHQ6S545 545 aa12.49□□□□□ -0.41
EPHA4-205ENST00000419964 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
EPHA4-205ENST00000419964 TRPC6Q9Y210 931 aa12.48□□□□□ -0.41
EPHA4-205ENST00000419964 MFRPQ9BY79 579 aa12.47□□□□□ -0.41
EPHA4-205ENST00000419964 NLRP6P59044 892 aa12.46□□□□□ -0.41
EPHA4-205ENST00000419964 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
EPHA4-205ENST00000419964 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
EPHA4-205ENST00000419964 KDM2AQ9Y2K7 1162 aa12.45□□□□□ -0.42
EPHA4-205ENST00000419964 TTLL13PA6NNM8 815 aa12.42□□□□□ -0.42
EPHA4-205ENST00000419964 MKRN3Q13064 507 aaKnown RBP12.41□□□□□ -0.42
EPHA4-205ENST00000419964 BMP2KQ9NSY1 1161 aaPredicted RBP12.4□□□□□ -0.42
EPHA4-205ENST00000419964 PHF8Q9UPP1 1060 aa12.4□□□□□ -0.42
EPHA4-205ENST00000419964 FBXO22Q8NEZ5 403 aa12.39□□□□□ -0.43
EPHA4-205ENST00000419964 TRIM35Q9UPQ4 493 aa12.34□□□□□ -0.43
EPHA4-205ENST00000419964 GABBR2O75899 941 aa12.33□□□□□ -0.44
EPHA4-205ENST00000419964 PPP1R37O75864 691 aa12.3□□□□□ -0.44
EPHA4-205ENST00000419964 ATMINO43313 823 aaPredicted RBP12.29□□□□□ -0.44
EPHA4-205ENST00000419964 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
EPHA4-205ENST00000419964 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
EPHA4-205ENST00000419964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
EPHA4-205ENST00000419964 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
EPHA4-205ENST00000419964 BCANQ96GW7 911 aa12.27□□□□□ -0.45
EPHA4-205ENST00000419964 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.45
EPHA4-205ENST00000419964 DCBLD2Q96PD2 775 aa12.26□□□□□ -0.45
EPHA4-205ENST00000419964 UNC13AQ9UPW8 1703 aa12.25□□□□□ -0.45
EPHA4-205ENST00000419964 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
EPHA4-205ENST00000419964 IER5LQ5T953 404 aa12.24□□□□□ -0.45
EPHA4-205ENST00000419964 BAZ1AQ9NRL2 1556 aaPredicted RBP12.24□□□□□ -0.45
EPHA4-205ENST00000419964 CADPS2Q86UW7 1296 aa12.23□□□□□ -0.45
EPHA4-205ENST00000419964 WDR70Q9NW82 654 aa12.22□□□□□ -0.45
EPHA4-205ENST00000419964 SP7Q8TDD2 431 aaPredicted RBP12.18□□□□□ -0.46
EPHA4-205ENST00000419964 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
EPHA4-205ENST00000419964 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
EPHA4-205ENST00000419964 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
EPHA4-205ENST00000419964 PLCG2P16885 1265 aa12.14□□□□□ -0.47
EPHA4-205ENST00000419964 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
EPHA4-205ENST00000419964 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms