RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
LINC00963-202ENST00000419300 CASC1Q6TDU7 716 aa13.18□□□□□ -0.3
LINC00963-202ENST00000419300 BAZ1BQ9UIG0 1483 aaKnown RBP13.18□□□□□ -0.3
LINC00963-202ENST00000419300 KIF27Q86VH2 1401 aa13.17□□□□□ -0.3
LINC00963-202ENST00000419300 PPP4R2Q9NY27 417 aa13.16□□□□□ -0.3
LINC00963-202ENST00000419300 WRNQ14191 1432 aaPredicted RBP eCLIP13.15□□□□□ -0.3
LINC00963-202ENST00000419300 PTMSP20962 102 aa13.13□□□□□ -0.31
LINC00963-202ENST00000419300 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
LINC00963-202ENST00000419300 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
LINC00963-202ENST00000419300 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
LINC00963-202ENST00000419300 ARID4BQ4LE39 1312 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-202ENST00000419300 TIMELESSQ9UNS1 1208 aa13.11□□□□□ -0.31
LINC00963-202ENST00000419300 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
LINC00963-202ENST00000419300 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
LINC00963-202ENST00000419300 ARHGAP35Q9NRY4 1499 aa13.09□□□□□ -0.31
LINC00963-202ENST00000419300 GOLGA6L6A8MZA4 724 aa13.09□□□□□ -0.31
LINC00963-202ENST00000419300 SLC24A1O60721 1099 aa13.09□□□□□ -0.31
LINC00963-202ENST00000419300 BCL11AQ9H165 835 aa13.09□□□□□ -0.31
LINC00963-202ENST00000419300 CCER2I3L3R5 266 aa13.09□□□□□ -0.31
LINC00963-202ENST00000419300 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
LINC00963-202ENST00000419300 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC00963-202ENST00000419300 CFAP44Q96MT7 982 aa13.07□□□□□ -0.32
LINC00963-202ENST00000419300 WIZO95785 1651 aa13.07□□□□□ -0.32
LINC00963-202ENST00000419300 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
LINC00963-202ENST00000419300 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
LINC00963-202ENST00000419300 CCNB3Q8WWL7 1395 aa13.06□□□□□ -0.32
LINC00963-202ENST00000419300 MS4A1P11836 297 aa13.06□□□□□ -0.32
LINC00963-202ENST00000419300 NAP1L5Q96NT1 182 aaPredicted RBP13.04□□□□□ -0.32
LINC00963-202ENST00000419300 PTMAP06454 111 aaKnown RBP13.04□□□□□ -0.32
LINC00963-202ENST00000419300 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
LINC00963-202ENST00000419300 ZRSR1Q15695 479 aaKnown RBP13.02□□□□□ -0.33
LINC00963-202ENST00000419300 CDK11BP21127 795 aaKnown RBP13.02□□□□□ -0.33
LINC00963-202ENST00000419300 P3H3Q8IVL6 736 aa13.01□□□□□ -0.33
LINC00963-202ENST00000419300 NRDCO43847 1150 aa13.01□□□□□ -0.33
LINC00963-202ENST00000419300 FTSJ3Q8IY81 847 aaKnown RBP13.01□□□□□ -0.33
LINC00963-202ENST00000419300 ARXQ96QS3 562 aa13.01□□□□□ -0.33
LINC00963-202ENST00000419300 CFAP53Q96M91 514 aa12.99□□□□□ -0.33
LINC00963-202ENST00000419300 DNTTIP2Q5QJE6 756 aaKnown RBP12.98□□□□□ -0.33
LINC00963-202ENST00000419300 SETD5Q9C0A6 1442 aa12.98□□□□□ -0.33
LINC00963-202ENST00000419300 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
LINC00963-202ENST00000419300 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
LINC00963-202ENST00000419300 TSPY4P0CV99 314 aa12.96□□□□□ -0.33
LINC00963-202ENST00000419300 TSPY10P0CW01 314 aa12.96□□□□□ -0.33
LINC00963-202ENST00000419300 DEKP35659 375 aaKnown RBP12.96□□□□□ -0.33
LINC00963-202ENST00000419300 SMARCA4P51532 1647 aa12.96□□□□□ -0.33
LINC00963-202ENST00000419300 IRX6P78412 446 aaPredicted RBP12.96□□□□□ -0.34
LINC00963-202ENST00000419300 FBLN2P98095 1184 aa12.95□□□□□ -0.34
LINC00963-202ENST00000419300 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
LINC00963-202ENST00000419300 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
LINC00963-202ENST00000419300 HSCBQ8IWL3 235 aa12.94□□□□□ -0.34
LINC00963-202ENST00000419300 PHLDB1Q86UU1 1377 aa12.93□□□□□ -0.34
LINC00963-202ENST00000419300 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
LINC00963-202ENST00000419300 ESF1Q9H501 851 aaKnown RBP12.92□□□□□ -0.34
LINC00963-202ENST00000419300 KIF21BO75037 1637 aa12.92□□□□□ -0.34
LINC00963-202ENST00000419300 CUX1P39880 1505 aa12.9□□□□□ -0.34
LINC00963-202ENST00000419300 ROCK2O75116 1388 aaKnown RBP12.9□□□□□ -0.34
LINC00963-202ENST00000419300 RBM19Q9Y4C8 960 aaKnown RBP12.9□□□□□ -0.34
LINC00963-202ENST00000419300 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
LINC00963-202ENST00000419300 HSP90AB1P08238 724 aaKnown RBP12.89□□□□□ -0.35
LINC00963-202ENST00000419300 FMN1Q68DA7 1419 aa12.89□□□□□ -0.35
LINC00963-202ENST00000419300 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
LINC00963-202ENST00000419300 RSPH6AQ9H0K4 717 aa12.88□□□□□ -0.35
LINC00963-202ENST00000419300 LAS1LQ9Y4W2 734 aaKnown RBP12.87□□□□□ -0.35
LINC00963-202ENST00000419300 GBP4Q96PP9 640 aa12.87□□□□□ -0.35
LINC00963-202ENST00000419300 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-202ENST00000419300 KTN1Q86UP2 1357 aaKnown RBP12.87□□□□□ -0.35
LINC00963-202ENST00000419300 EIF3AQ14152 1382 aaKnown RBP12.87□□□□□ -0.35
LINC00963-202ENST00000419300 TCERG1O14776 1098 aaKnown RBP12.86□□□□□ -0.35
LINC00963-202ENST00000419300 CHIC2Q9UKJ5 165 aa12.86□□□□□ -0.35
LINC00963-202ENST00000419300 SYAP1Q96A49 352 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-202ENST00000419300 MCCP23508 829 aa12.84□□□□□ -0.35
LINC00963-202ENST00000419300 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
LINC00963-202ENST00000419300 EIF4G1Q04637 1599 aaKnown RBP12.83□□□□□ -0.36
LINC00963-202ENST00000419300 CARD11Q9BXL7 1154 aa12.82□□□□□ -0.36
LINC00963-202ENST00000419300 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
LINC00963-202ENST00000419300 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-202ENST00000419300 RALBP1Q15311 655 aa12.81□□□□□ -0.36
LINC00963-202ENST00000419300 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
LINC00963-202ENST00000419300 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
LINC00963-202ENST00000419300 SUPT6HQ7KZ85 1726 aaKnown RBP12.8□□□□□ -0.36
LINC00963-202ENST00000419300 KANK1Q14678 1352 aa12.8□□□□□ -0.36
LINC00963-202ENST00000419300 PHF14O94880 888 aa12.8□□□□□ -0.36
LINC00963-202ENST00000419300 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
LINC00963-202ENST00000419300 RRP7BPQ9NSQ0 103 aa12.79□□□□□ -0.36
LINC00963-202ENST00000419300 NUDCQ9Y266 331 aa12.79□□□□□ -0.36
LINC00963-202ENST00000419300 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
LINC00963-202ENST00000419300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00963-202ENST00000419300 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.36
LINC00963-202ENST00000419300 RTN4Q9NQC3 1192 aaKnown RBP12.76□□□□□ -0.37
LINC00963-202ENST00000419300 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
LINC00963-202ENST00000419300 RGS3P49796 1198 aa12.75□□□□□ -0.37
LINC00963-202ENST00000419300 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
LINC00963-202ENST00000419300 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
LINC00963-202ENST00000419300 B4GALNT3Q6L9W6 998 aa12.75□□□□□ -0.37
LINC00963-202ENST00000419300 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
LINC00963-202ENST00000419300 TMF1P82094 1093 aa12.74□□□□□ -0.37
LINC00963-202ENST00000419300 RAB3GAP2Q9H2M9 1393 aa12.74□□□□□ -0.37
LINC00963-202ENST00000419300 CALD1Q05682 793 aaKnown RBP12.73□□□□□ -0.37
LINC00963-202ENST00000419300 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-202ENST00000419300 GOLGA6L3A6NEY3 463 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms