RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 RTL5Q5HYW3 569 aaPredicted RBP18.09■□□□□ 0.49
BDNF-208ENST00000418212 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.48
BDNF-208ENST00000418212 SENP3-EIF4A1A0A087X0R7 540 aa18.07■□□□□ 0.48
BDNF-208ENST00000418212 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
BDNF-208ENST00000418212 RGL3Q3MIN7 710 aa18.06■□□□□ 0.48
BDNF-208ENST00000418212 NEFMP07197 916 aa18.04■□□□□ 0.48
BDNF-208ENST00000418212 TMC1Q8TDI8 760 aa18.03■□□□□ 0.48
BDNF-208ENST00000418212 SIN3AQ96ST3 1273 aa18.03■□□□□ 0.48
BDNF-208ENST00000418212 MRS2Q9HD23 443 aa18.02■□□□□ 0.47
BDNF-208ENST00000418212 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
BDNF-208ENST00000418212 CFDP1Q9UEE9 299 aaPredicted RBP18■□□□□ 0.47
BDNF-208ENST00000418212 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
BDNF-208ENST00000418212 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
BDNF-208ENST00000418212 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
BDNF-208ENST00000418212 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
BDNF-208ENST00000418212 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
BDNF-208ENST00000418212 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
BDNF-208ENST00000418212 CUX2O14529 1486 aa17.93■□□□□ 0.46
BDNF-208ENST00000418212 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
BDNF-208ENST00000418212 KANK4Q5T7N3 995 aaPredicted RBP17.9■□□□□ 0.46
BDNF-208ENST00000418212 PRKCSHP14314 528 aaPredicted RBP17.87■□□□□ 0.45
BDNF-208ENST00000418212 TDRD9Q8NDG6 1382 aaKnown RBP17.84■□□□□ 0.45
BDNF-208ENST00000418212 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
BDNF-208ENST00000418212 ERCC6Q03468 1493 aa17.84■□□□□ 0.45
BDNF-208ENST00000418212 CCNB3Q8WWL7 1395 aa17.81■□□□□ 0.44
BDNF-208ENST00000418212 CCDC136Q96JN2 1154 aa17.8■□□□□ 0.44
BDNF-208ENST00000418212 WDR43Q15061 677 aaKnown RBP eCLIP17.79■□□□□ 0.44
BDNF-208ENST00000418212 ANP32AP39687 249 aaKnown RBP17.78■□□□□ 0.44
BDNF-208ENST00000418212 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
BDNF-208ENST00000418212 WIZO95785 1651 aa17.75■□□□□ 0.43
BDNF-208ENST00000418212 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
BDNF-208ENST00000418212 FOXD1Q16676 465 aa17.73■□□□□ 0.43
BDNF-208ENST00000418212 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
BDNF-208ENST00000418212 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.43
BDNF-208ENST00000418212 PPP1R15AO75807 674 aaPredicted RBP17.7■□□□□ 0.42
BDNF-208ENST00000418212 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
BDNF-208ENST00000418212 TSHZ2Q9NRE2 1034 aa17.68■□□□□ 0.42
BDNF-208ENST00000418212 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
BDNF-208ENST00000418212 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
BDNF-208ENST00000418212 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
BDNF-208ENST00000418212 PPM1GO15355 546 aaPredicted RBP17.63■□□□□ 0.41
BDNF-208ENST00000418212 NEUROD2Q15784 382 aa17.62■□□□□ 0.41
BDNF-208ENST00000418212 C14orf37Q86TY3 774 aa17.62■□□□□ 0.41
BDNF-208ENST00000418212 TNNT2P45379 298 aaPredicted RBP17.61■□□□□ 0.41
BDNF-208ENST00000418212 ZBTB7CA1YPR0 619 aa17.61■□□□□ 0.41
BDNF-208ENST00000418212 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
BDNF-208ENST00000418212 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
BDNF-208ENST00000418212 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
BDNF-208ENST00000418212 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
BDNF-208ENST00000418212 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.4
BDNF-208ENST00000418212 MLECQ14165 292 aa17.57■□□□□ 0.4
BDNF-208ENST00000418212 PKD2Q13563 968 aa17.56■□□□□ 0.4
BDNF-208ENST00000418212 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
BDNF-208ENST00000418212 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
BDNF-208ENST00000418212 CC2D1BQ5T0F9 858 aaKnown RBP17.56■□□□□ 0.4
BDNF-208ENST00000418212 HSP90AA1P07900 732 aaKnown RBP17.55■□□□□ 0.4
BDNF-208ENST00000418212 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
BDNF-208ENST00000418212 GGT6Q6P531 493 aa17.54■□□□□ 0.4
BDNF-208ENST00000418212 SETD5Q9C0A6 1442 aa17.53■□□□□ 0.4
BDNF-208ENST00000418212 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
BDNF-208ENST00000418212 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
BDNF-208ENST00000418212 NBR1Q14596 966 aa17.52■□□□□ 0.4
BDNF-208ENST00000418212 A0A0G2JS52 829 aa17.52■□□□□ 0.39
BDNF-208ENST00000418212 SAFB2Q14151 953 aaKnown RBP eCLIP17.51■□□□□ 0.39
BDNF-208ENST00000418212 UPF2Q9HAU5 1272 aaKnown RBP17.51■□□□□ 0.39
BDNF-208ENST00000418212 HSPA5P11021 654 aaKnown RBP17.49■□□□□ 0.39
BDNF-208ENST00000418212 POGKQ9P215 609 aa17.49■□□□□ 0.39
BDNF-208ENST00000418212 ARHGAP35Q9NRY4 1499 aa17.48■□□□□ 0.39
BDNF-208ENST00000418212 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
BDNF-208ENST00000418212 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
BDNF-208ENST00000418212 RBM19Q9Y4C8 960 aaKnown RBP17.45■□□□□ 0.38
BDNF-208ENST00000418212 JPH4Q96JJ6 628 aa17.44■□□□□ 0.38
BDNF-208ENST00000418212 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
BDNF-208ENST00000418212 HNRNPMP52272 730 aaKnown RBP eCLIP17.44■□□□□ 0.38
BDNF-208ENST00000418212 ARXQ96QS3 562 aa17.43■□□□□ 0.38
BDNF-208ENST00000418212 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
BDNF-208ENST00000418212 CFAP53Q96M91 514 aa17.43■□□□□ 0.38
BDNF-208ENST00000418212 FMN1Q68DA7 1419 aa17.42■□□□□ 0.38
BDNF-208ENST00000418212 NUP155O75694 1391 aa17.42■□□□□ 0.38
BDNF-208ENST00000418212 TIMELESSQ9UNS1 1208 aa17.41■□□□□ 0.38
BDNF-208ENST00000418212 LAS1LQ9Y4W2 734 aaKnown RBP17.41■□□□□ 0.38
BDNF-208ENST00000418212 SOX12O15370 315 aa17.4■□□□□ 0.38
BDNF-208ENST00000418212 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
BDNF-208ENST00000418212 L3MBTL2Q969R5 705 aa17.4■□□□□ 0.38
BDNF-208ENST00000418212 CARMIL2Q6F5E8 1435 aa17.4■□□□□ 0.38
BDNF-208ENST00000418212 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
BDNF-208ENST00000418212 U2SURPO15042 1029 aaKnown RBP17.39■□□□□ 0.37
BDNF-208ENST00000418212 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.37
BDNF-208ENST00000418212 STK26Q9P289 416 aa17.39■□□□□ 0.37
BDNF-208ENST00000418212 TMF1P82094 1093 aa17.38■□□□□ 0.37
BDNF-208ENST00000418212 EFCAB2Q5VUJ9 269 aa17.37■□□□□ 0.37
BDNF-208ENST00000418212 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
BDNF-208ENST00000418212 KIF3BO15066 747 aa17.35■□□□□ 0.37
BDNF-208ENST00000418212 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
BDNF-208ENST00000418212 DEKP35659 375 aaKnown RBP17.33■□□□□ 0.36
BDNF-208ENST00000418212 RGS3P49796 1198 aa17.32■□□□□ 0.36
BDNF-208ENST00000418212 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
BDNF-208ENST00000418212 MYH16Q9H6N6 1097 aa17.32■□□□□ 0.36
BDNF-208ENST00000418212 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
BDNF-208ENST00000418212 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms