RNA–Protein interactions for RNA: ENST00000415861.2

CD164-205, Transcript of CD164 molecule, humanhuman

TSL 1 (best)

Gene CD164, Length 4,963 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-205ENST00000415861 RBM25P49756 843 aaKnown RBP6.86□□□□□ -1.31
CD164-205ENST00000415861 SCAF1Q9H7N4 1312 aaKnown RBP6.85□□□□□ -1.31
CD164-205ENST00000415861 RGL2O15211 777 aa6.84□□□□□ -1.31
CD164-205ENST00000415861 AEBP1Q8IUX7 1158 aa6.84□□□□□ -1.31
CD164-205ENST00000415861 APBB1O00213 710 aa6.83□□□□□ -1.32
CD164-205ENST00000415861 USP35Q9P2H5 1018 aa6.83□□□□□ -1.32
CD164-205ENST00000415861 DHX37Q8IY37 1157 aaKnown RBP6.82□□□□□ -1.32
CD164-205ENST00000415861 LMOD2Q6P5Q4 547 aa6.82□□□□□ -1.32
CD164-205ENST00000415861 NECTIN2Q92692 538 aa6.82□□□□□ -1.32
CD164-205ENST00000415861 MYT1LQ9UL68 1186 aa6.81□□□□□ -1.32
CD164-205ENST00000415861 SAMD1Q6SPF0 538 aaPredicted RBP6.81□□□□□ -1.32
CD164-205ENST00000415861 SPDYE4A6NLX3 237 aa6.81□□□□□ -1.32
CD164-205ENST00000415861 SLC4A2P04920 1241 aa6.79□□□□□ -1.32
CD164-205ENST00000415861 BRD2P25440 801 aaKnown RBP6.78□□□□□ -1.32
CD164-205ENST00000415861 FOXD4L5Q5VV16 416 aaPredicted RBP6.78□□□□□ -1.32
CD164-205ENST00000415861 FOXD4L4Q8WXT5 416 aaPredicted RBP6.78□□□□□ -1.32
CD164-205ENST00000415861 C1orf115Q9H7X2 142 aa6.76□□□□□ -1.33
CD164-205ENST00000415861 SPOCK2Q92563 424 aa6.75□□□□□ -1.33
CD164-205ENST00000415861 ZNF428Q96B54 188 aa6.75□□□□□ -1.33
CD164-205ENST00000415861 DNAJC5Q9H3Z4 198 aa6.75□□□□□ -1.33
CD164-205ENST00000415861 MTMR7Q9Y216 660 aa6.75□□□□□ -1.33
CD164-205ENST00000415861 SLC24A3Q9HC58 644 aa6.75□□□□□ -1.33
CD164-205ENST00000415861 PUS7Q96PZ0 661 aaKnown RBP6.74□□□□□ -1.33
CD164-205ENST00000415861 UBE2Q2Q8WVN8 375 aa6.74□□□□□ -1.33
CD164-205ENST00000415861 WDR70Q9NW82 654 aa6.73□□□□□ -1.33
CD164-205ENST00000415861 TMCO4Q5TGY1 634 aa6.72□□□□□ -1.33
CD164-205ENST00000415861 CIZ1Q9ULV3 898 aaPredicted RBP6.72□□□□□ -1.33
CD164-205ENST00000415861 PDE4CQ08493 712 aa6.72□□□□□ -1.33
CD164-205ENST00000415861 IL27Q8NEV9 243 aa6.71□□□□□ -1.34
CD164-205ENST00000415861 TRIM41Q8WV44 630 aa6.7□□□□□ -1.34
CD164-205ENST00000415861 ATF5Q9Y2D1 282 aaPredicted RBP6.69□□□□□ -1.34
CD164-205ENST00000415861 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.69□□□□□ -1.34
CD164-205ENST00000415861 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
CD164-205ENST00000415861 GZF1Q9H116 711 aaPredicted RBP6.67□□□□□ -1.34
CD164-205ENST00000415861 ARID4BQ4LE39 1312 aaPredicted RBP6.66□□□□□ -1.34
CD164-205ENST00000415861 E9PSI1 815 aa6.66□□□□□ -1.34
CD164-205ENST00000415861 NEFLP07196 543 aa6.66□□□□□ -1.34
CD164-205ENST00000415861 MAPK8IP2Q13387 824 aaPredicted RBP6.66□□□□□ -1.34
CD164-205ENST00000415861 CCDC82Q8N4S0 544 aa6.66□□□□□ -1.34
CD164-205ENST00000415861 P3H3Q8IVL6 736 aa6.65□□□□□ -1.34
CD164-205ENST00000415861 MFAP1P55081 439 aaKnown RBP6.65□□□□□ -1.35
CD164-205ENST00000415861 TAF7LQ5H9L4 462 aa6.64□□□□□ -1.35
CD164-205ENST00000415861 PEG3Q9GZU2 1588 aa6.64□□□□□ -1.35
CD164-205ENST00000415861 RNF216Q9NWF9 866 aaPredicted RBP6.64□□□□□ -1.35
CD164-205ENST00000415861 ZC3H15Q8WU90 426 aaKnown RBP6.63□□□□□ -1.35
CD164-205ENST00000415861 ZCCHC6Q5VYS8 1495 aaKnown RBP6.63□□□□□ -1.35
CD164-205ENST00000415861 FBXW7Q969H0 707 aa6.62□□□□□ -1.35
CD164-205ENST00000415861 DNAJC5BQ9UF47 199 aa6.62□□□□□ -1.35
CD164-205ENST00000415861 PLCD3Q8N3E9 789 aa6.61□□□□□ -1.35
CD164-205ENST00000415861 RGS22Q8NE09 1264 aa6.61□□□□□ -1.35
CD164-205ENST00000415861 GPBP1L1Q9HC44 474 aaPredicted RBP6.61□□□□□ -1.35
CD164-205ENST00000415861 BCL11AQ9H165 835 aa6.59□□□□□ -1.35
CD164-205ENST00000415861 EIF4G1Q04637 1599 aaKnown RBP6.59□□□□□ -1.35
CD164-205ENST00000415861 ZNF526Q8TF50 670 aaPredicted RBP6.58□□□□□ -1.36
CD164-205ENST00000415861 FAM177A1Q8N128 213 aaPredicted RBP6.57□□□□□ -1.36
CD164-205ENST00000415861 MKRN3Q13064 507 aaKnown RBP6.57□□□□□ -1.36
CD164-205ENST00000415861 PRDM2Q13029 1718 aa6.57□□□□□ -1.36
CD164-205ENST00000415861 HS6ST3Q8IZP7 471 aa6.55□□□□□ -1.36
CD164-205ENST00000415861 CWC22Q9HCG8 908 aaKnown RBP6.54□□□□□ -1.36
CD164-205ENST00000415861 KCNV2Q8TDN2 545 aa6.54□□□□□ -1.36
CD164-205ENST00000415861 KRI1Q8N9T8 703 aaKnown RBP6.53□□□□□ -1.36
CD164-205ENST00000415861 PSMD1Q99460 953 aa6.53□□□□□ -1.36
CD164-205ENST00000415861 A0A0U1RQG5 324 aaPredicted RBP6.53□□□□□ -1.36
CD164-205ENST00000415861 CCDC97Q96F63 343 aaPredicted RBP6.52□□□□□ -1.37
CD164-205ENST00000415861 RSPH4AQ5TD94 716 aa6.52□□□□□ -1.37
CD164-205ENST00000415861 ZNF592Q92610 1267 aa6.51□□□□□ -1.37
CD164-205ENST00000415861 IRX6P78412 446 aaPredicted RBP6.51□□□□□ -1.37
CD164-205ENST00000415861 CLUAP1Q96AJ1 413 aa6.51□□□□□ -1.37
CD164-205ENST00000415861 ZNF777Q9ULD5 760 aaPredicted RBP6.51□□□□□ -1.37
CD164-205ENST00000415861 TRAIPQ9BWF2 469 aa6.51□□□□□ -1.37
CD164-205ENST00000415861 SCRIBQ14160 1630 aa6.5□□□□□ -1.37
CD164-205ENST00000415861 GTPBP6O43824 516 aaPredicted RBP6.5□□□□□ -1.37
CD164-205ENST00000415861 NKX1-1Q15270 411 aaPredicted RBP6.5□□□□□ -1.37
CD164-205ENST00000415861 MIER1Q8N108 512 aa6.49□□□□□ -1.37
CD164-205ENST00000415861 STK25O00506 426 aa6.48□□□□□ -1.37
CD164-205ENST00000415861 NACADO15069 1562 aa6.48□□□□□ -1.37
CD164-205ENST00000415861 ZFP91Q96JP5 570 aaPredicted RBP6.48□□□□□ -1.37
CD164-205ENST00000415861 BCCIPQ9P287 314 aaKnown RBP eCLIP6.47□□□□□ -1.37
CD164-205ENST00000415861 KDM4CQ9H3R0 1056 aa6.47□□□□□ -1.37
CD164-205ENST00000415861 ATP1B4Q9UN42 357 aaPredicted RBP6.47□□□□□ -1.37
CD164-205ENST00000415861 RETREG2Q8NC44 543 aa6.46□□□□□ -1.37
CD164-205ENST00000415861 ZNF692Q9BU19 519 aaPredicted RBP6.46□□□□□ -1.37
CD164-205ENST00000415861 ZNF316A6NFI3 1004 aaPredicted RBP6.46□□□□□ -1.38
CD164-205ENST00000415861 BCL11BQ9C0K0 894 aaPredicted RBP6.46□□□□□ -1.38
CD164-205ENST00000415861 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.46□□□□□ -1.38
CD164-205ENST00000415861 FLIIQ13045 1269 aa6.46□□□□□ -1.38
CD164-205ENST00000415861 PROM2Q8N271 834 aa6.45□□□□□ -1.38
CD164-205ENST00000415861 CERS3Q8IU89 383 aa6.45□□□□□ -1.38
CD164-205ENST00000415861 ZNF219Q9P2Y4 722 aaPredicted RBP6.45□□□□□ -1.38
CD164-205ENST00000415861 CLSTN1O94985 981 aa6.45□□□□□ -1.38
CD164-205ENST00000415861 CCDC136Q96JN2 1154 aa6.44□□□□□ -1.38
CD164-205ENST00000415861 BRPF3Q9ULD4 1205 aa6.44□□□□□ -1.38
CD164-205ENST00000415861 TRAK2O60296 914 aa6.43□□□□□ -1.38
CD164-205ENST00000415861 ZNF326Q5BKZ1 582 aaKnown RBP6.43□□□□□ -1.38
CD164-205ENST00000415861 SEMA3EO15041 775 aa6.43□□□□□ -1.38
CD164-205ENST00000415861 PPP1R1BQ9UD71 204 aaPredicted RBP6.42□□□□□ -1.38
CD164-205ENST00000415861 TICAM2Q86XR7 235 aa6.42□□□□□ -1.38
CD164-205ENST00000415861 KDM4AO75164 1064 aa6.41□□□□□ -1.38
CD164-205ENST00000415861 AK7Q96M32 723 aa6.41□□□□□ -1.38
CD164-205ENST00000415861 PKNOX2Q96KN3 472 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms