RNA–Protein interactions for RNA: ENST00000415839.2

PMS2-205, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 5

Gene PMS2, Length 924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-205ENST00000415839 SLC39A7Q92504 469 aa12.69□□□□□ -0.38
PMS2-205ENST00000415839 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
PMS2-205ENST00000415839 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
PMS2-205ENST00000415839 PHF12Q96QT6 1004 aa12.65□□□□□ -0.38
PMS2-205ENST00000415839 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
PMS2-205ENST00000415839 ATMINO43313 823 aaPredicted RBP12.61□□□□□ -0.39
PMS2-205ENST00000415839 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
PMS2-205ENST00000415839 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
PMS2-205ENST00000415839 STAG3Q9UJ98 1225 aa12.48□□□□□ -0.41
PMS2-205ENST00000415839 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
PMS2-205ENST00000415839 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
PMS2-205ENST00000415839 MS4A3Q96HJ5 214 aa12.44□□□□□ -0.42
PMS2-205ENST00000415839 ST18O60284 1047 aa12.43□□□□□ -0.42
PMS2-205ENST00000415839 ATN1P54259 1190 aaPredicted RBP12.37□□□□□ -0.43
PMS2-205ENST00000415839 PROM2Q8N271 834 aa12.23□□□□□ -0.45
PMS2-205ENST00000415839 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
PMS2-205ENST00000415839 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
PMS2-205ENST00000415839 MNX1P50219 401 aaPredicted RBP12.17□□□□□ -0.46
PMS2-205ENST00000415839 SLAIN1Q8ND83 568 aa12.16□□□□□ -0.46
PMS2-205ENST00000415839 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
PMS2-205ENST00000415839 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
PMS2-205ENST00000415839 TRPC6Q9Y210 931 aa12.08□□□□□ -0.48
PMS2-205ENST00000415839 SEC24BO95487 1268 aa12.07□□□□□ -0.48
PMS2-205ENST00000415839 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
PMS2-205ENST00000415839 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
PMS2-205ENST00000415839 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
PMS2-205ENST00000415839 TIE1P35590 1138 aa12□□□□□ -0.49
PMS2-205ENST00000415839 KIF12Q96FN5 646 aa11.98□□□□□ -0.49
PMS2-205ENST00000415839 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
PMS2-205ENST00000415839 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
PMS2-205ENST00000415839 MIER1Q8N108 512 aa11.96□□□□□ -0.49
PMS2-205ENST00000415839 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
PMS2-205ENST00000415839 TTLL13PA6NNM8 815 aa11.92□□□□□ -0.5
PMS2-205ENST00000415839 IER5LQ5T953 404 aa11.92□□□□□ -0.5
PMS2-205ENST00000415839 POTEB3A0JP26 581 aa11.91□□□□□ -0.5
PMS2-205ENST00000415839 POTEBQ6S5H4 581 aa11.91□□□□□ -0.5
PMS2-205ENST00000415839 FKBP8Q14318 412 aa11.9□□□□□ -0.5
PMS2-205ENST00000415839 SNPHO15079 494 aa11.88□□□□□ -0.51
PMS2-205ENST00000415839 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
PMS2-205ENST00000415839 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
PMS2-205ENST00000415839 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
PMS2-205ENST00000415839 EMP3P54852 163 aa11.82□□□□□ -0.52
PMS2-205ENST00000415839 HS3ST6Q96QI5 342 aa11.82□□□□□ -0.52
PMS2-205ENST00000415839 MAP3K13O43283 966 aa11.81□□□□□ -0.52
PMS2-205ENST00000415839 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
PMS2-205ENST00000415839 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
PMS2-205ENST00000415839 FAM205CA6NFA0 338 aa11.73□□□□□ -0.53
PMS2-205ENST00000415839 NUBP1P53384 320 aa11.73□□□□□ -0.53
PMS2-205ENST00000415839 PLCG2P16885 1265 aa11.69□□□□□ -0.54
PMS2-205ENST00000415839 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
PMS2-205ENST00000415839 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
PMS2-205ENST00000415839 FAM212AQ96EL1 285 aa11.65□□□□□ -0.54
PMS2-205ENST00000415839 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
PMS2-205ENST00000415839 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
PMS2-205ENST00000415839 PCDHB13Q9Y5F0 798 aa11.63□□□□□ -0.55
PMS2-205ENST00000415839 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
PMS2-205ENST00000415839 DCAF8Q5TAQ9 597 aa11.55□□□□□ -0.56
PMS2-205ENST00000415839 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
PMS2-205ENST00000415839 VASPP50552 380 aaPredicted RBP11.52□□□□□ -0.57
PMS2-205ENST00000415839 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
PMS2-205ENST00000415839 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
PMS2-205ENST00000415839 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
PMS2-205ENST00000415839 PYGBP11216 843 aa11.48□□□□□ -0.57
PMS2-205ENST00000415839 GSE1Q14687 1217 aa11.42□□□□□ -0.58
PMS2-205ENST00000415839 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
PMS2-205ENST00000415839 ZNF467Q7Z7K2 595 aaPredicted RBP11.34□□□□□ -0.59
PMS2-205ENST00000415839 CHRM1P11229 460 aaPredicted RBP11.33□□□□□ -0.6
PMS2-205ENST00000415839 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
PMS2-205ENST00000415839 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
PMS2-205ENST00000415839 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
PMS2-205ENST00000415839 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
PMS2-205ENST00000415839 PTGER2P43116 358 aa11.29□□□□□ -0.6
PMS2-205ENST00000415839 ERBB3P21860 1342 aa11.29□□□□□ -0.6
PMS2-205ENST00000415839 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
PMS2-205ENST00000415839 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
PMS2-205ENST00000415839 PDCD7Q8N8D1 485 aaKnown RBP11.27□□□□□ -0.61
PMS2-205ENST00000415839 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
PMS2-205ENST00000415839 PSEN1P49768 467 aa11.23□□□□□ -0.61
PMS2-205ENST00000415839 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
PMS2-205ENST00000415839 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
PMS2-205ENST00000415839 VARS2Q5ST30 1063 aaKnown RBP11.2□□□□□ -0.62
PMS2-205ENST00000415839 L3MBTL3Q96JM7 780 aaPredicted RBP11.2□□□□□ -0.62
PMS2-205ENST00000415839 PDAP1Q13442 181 aaKnown RBP11.18□□□□□ -0.62
PMS2-205ENST00000415839 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
PMS2-205ENST00000415839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.62
PMS2-205ENST00000415839 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
PMS2-205ENST00000415839 ILDR1Q86SU0 546 aaPredicted RBP11.09□□□□□ -0.63
PMS2-205ENST00000415839 TRIM41Q8WV44 630 aa11.09□□□□□ -0.63
PMS2-205ENST00000415839 CABP2Q9NPB3 220 aa11.09□□□□□ -0.63
PMS2-205ENST00000415839 ANKRD13DQ6ZTN6 518 aa11.05□□□□□ -0.64
PMS2-205ENST00000415839 DOK7Q18PE1 504 aa11.03□□□□□ -0.64
PMS2-205ENST00000415839 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
PMS2-205ENST00000415839 HCSTQ9UBK5 93 aa11□□□□□ -0.65
PMS2-205ENST00000415839 IRX2Q9BZI1 471 aaPredicted RBP10.99□□□□□ -0.65
PMS2-205ENST00000415839 G3V3G9 751 aa10.97□□□□□ -0.65
PMS2-205ENST00000415839 BOLA1Q9Y3E2 137 aa10.97□□□□□ -0.65
PMS2-205ENST00000415839 EFCAB3Q8N7B9 438 aa10.96□□□□□ -0.65
PMS2-205ENST00000415839 RIOK3O14730 519 aaKnown RBP10.94□□□□□ -0.66
PMS2-205ENST00000415839 RNF25Q96BH1 459 aaPredicted RBP10.93□□□□□ -0.66
PMS2-205ENST00000415839 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms