RNA–Protein interactions for RNA: ENST00000415288.6

ERBB3-203, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-203ENST00000415288 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
ERBB3-203ENST00000415288 CEP162Q5TB80 1403 aa12.77□□□□□ -0.37
ERBB3-203ENST00000415288 PPM1GO15355 546 aaPredicted RBP12.77□□□□□ -0.37
ERBB3-203ENST00000415288 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
ERBB3-203ENST00000415288 ATP1B4Q9UN42 357 aaPredicted RBP12.76□□□□□ -0.37
ERBB3-203ENST00000415288 GSE1Q14687 1217 aa12.73□□□□□ -0.37
ERBB3-203ENST00000415288 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
ERBB3-203ENST00000415288 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
ERBB3-203ENST00000415288 SLC4A3P48751 1232 aa12.71□□□□□ -0.38
ERBB3-203ENST00000415288 ARID3AQ99856 593 aa12.69□□□□□ -0.38
ERBB3-203ENST00000415288 ZCCHC6Q5VYS8 1495 aaKnown RBP12.68□□□□□ -0.38
ERBB3-203ENST00000415288 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
ERBB3-203ENST00000415288 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
ERBB3-203ENST00000415288 FRAT1Q92837 279 aaPredicted RBP12.66□□□□□ -0.38
ERBB3-203ENST00000415288 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
ERBB3-203ENST00000415288 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
ERBB3-203ENST00000415288 PNNQ9H307 717 aaKnown RBP12.64□□□□□ -0.39
ERBB3-203ENST00000415288 USP35Q9P2H5 1018 aa12.63□□□□□ -0.39
ERBB3-203ENST00000415288 DHX57Q6P158 1386 aaKnown RBP12.58□□□□□ -0.4
ERBB3-203ENST00000415288 NFKBIBQ15653 356 aa12.57□□□□□ -0.4
ERBB3-203ENST00000415288 DDRGK1Q96HY6 314 aa12.57□□□□□ -0.4
ERBB3-203ENST00000415288 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.4
ERBB3-203ENST00000415288 FAM43AQ8N2R8 423 aa12.52□□□□□ -0.41
ERBB3-203ENST00000415288 PDE4AP27815 886 aa12.51□□□□□ -0.41
ERBB3-203ENST00000415288 PDE4CQ08493 712 aa12.5□□□□□ -0.41
ERBB3-203ENST00000415288 TONSLQ96HA7 1378 aa12.5□□□□□ -0.41
ERBB3-203ENST00000415288 RBM10P98175 930 aaKnown RBP12.5□□□□□ -0.41
ERBB3-203ENST00000415288 C11orf95C9JLR9 678 aaPredicted RBP12.49□□□□□ -0.41
ERBB3-203ENST00000415288 TRIM44Q96DX7 344 aaPredicted RBP12.48□□□□□ -0.41
ERBB3-203ENST00000415288 TNIKQ9UKE5 1360 aa12.48□□□□□ -0.41
ERBB3-203ENST00000415288 FRAT2O75474 233 aaPredicted RBP12.48□□□□□ -0.41
ERBB3-203ENST00000415288 PPP1R15AO75807 674 aaPredicted RBP12.48□□□□□ -0.41
ERBB3-203ENST00000415288 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
ERBB3-203ENST00000415288 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
ERBB3-203ENST00000415288 SLKQ9H2G2 1235 aaPredicted RBP12.47□□□□□ -0.41
ERBB3-203ENST00000415288 WRNQ14191 1432 aaPredicted RBP eCLIP12.47□□□□□ -0.41
ERBB3-203ENST00000415288 CLIP1P30622 1438 aa12.45□□□□□ -0.42
ERBB3-203ENST00000415288 RGS3P49796 1198 aa12.44□□□□□ -0.42
ERBB3-203ENST00000415288 RB1CC1Q8TDY2 1594 aa12.43□□□□□ -0.42
ERBB3-203ENST00000415288 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
ERBB3-203ENST00000415288 RRP9O43818 475 aaKnown RBP12.42□□□□□ -0.42
ERBB3-203ENST00000415288 TCERG1O14776 1098 aaKnown RBP12.42□□□□□ -0.42
ERBB3-203ENST00000415288 SOGA1O94964 1423 aa12.41□□□□□ -0.42
ERBB3-203ENST00000415288 L1TD1Q5T7N2 865 aaKnown RBP12.41□□□□□ -0.42
ERBB3-203ENST00000415288 WASHC2CQ9Y4E1 1318 aa12.41□□□□□ -0.42
ERBB3-203ENST00000415288 CCDC184Q52MB2 194 aa12.4□□□□□ -0.42
ERBB3-203ENST00000415288 ZNF326Q5BKZ1 582 aaKnown RBP12.4□□□□□ -0.42
ERBB3-203ENST00000415288 SKAP1Q86WV1 359 aa12.4□□□□□ -0.42
ERBB3-203ENST00000415288 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
ERBB3-203ENST00000415288 KANK4Q5T7N3 995 aaPredicted RBP12.39□□□□□ -0.43
ERBB3-203ENST00000415288 EXOC6Q8TAG9 804 aa12.38□□□□□ -0.43
ERBB3-203ENST00000415288 TMC1Q8TDI8 760 aa12.38□□□□□ -0.43
ERBB3-203ENST00000415288 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
ERBB3-203ENST00000415288 RRAGDQ9NQL2 400 aaPredicted RBP12.37□□□□□ -0.43
ERBB3-203ENST00000415288 FAM13BQ9NYF5 915 aa12.36□□□□□ -0.43
ERBB3-203ENST00000415288 EEA1Q15075 1411 aa12.36□□□□□ -0.43
ERBB3-203ENST00000415288 AKNAQ7Z591 1439 aa12.36□□□□□ -0.43
ERBB3-203ENST00000415288 GOLGA6L3A6NEY3 463 aa12.35□□□□□ -0.43
ERBB3-203ENST00000415288 POGKQ9P215 609 aa12.35□□□□□ -0.43
ERBB3-203ENST00000415288 TNNT2P45379 298 aaPredicted RBP12.34□□□□□ -0.43
ERBB3-203ENST00000415288 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
ERBB3-203ENST00000415288 ANP32BQ92688 251 aaKnown RBP12.34□□□□□ -0.43
ERBB3-203ENST00000415288 NUDCQ9Y266 331 aa12.33□□□□□ -0.44
ERBB3-203ENST00000415288 RAB3GAP2Q9H2M9 1393 aa12.32□□□□□ -0.44
ERBB3-203ENST00000415288 ZHX1Q9UKY1 873 aaPredicted RBP12.32□□□□□ -0.44
ERBB3-203ENST00000415288 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
ERBB3-203ENST00000415288 CDK11BP21127 795 aaKnown RBP12.31□□□□□ -0.44
ERBB3-203ENST00000415288 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
ERBB3-203ENST00000415288 ZBED9Q6R2W3 1325 aa12.3□□□□□ -0.44
ERBB3-203ENST00000415288 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
ERBB3-203ENST00000415288 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
ERBB3-203ENST00000415288 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
ERBB3-203ENST00000415288 MYH16Q9H6N6 1097 aa12.3□□□□□ -0.44
ERBB3-203ENST00000415288 PLIN1O60240 522 aa12.29□□□□□ -0.44
ERBB3-203ENST00000415288 BECN1Q14457 450 aa12.29□□□□□ -0.44
ERBB3-203ENST00000415288 CCDC88BA6NC98 1476 aa12.29□□□□□ -0.44
ERBB3-203ENST00000415288 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
ERBB3-203ENST00000415288 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-203ENST00000415288 FGD1P98174 961 aa12.28□□□□□ -0.44
ERBB3-203ENST00000415288 AAMPQ13685 434 aa12.28□□□□□ -0.44
ERBB3-203ENST00000415288 AEBP2Q6ZN18 517 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-203ENST00000415288 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
ERBB3-203ENST00000415288 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
ERBB3-203ENST00000415288 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
ERBB3-203ENST00000415288 VPS8Q8N3P4 1428 aa12.24□□□□□ -0.45
ERBB3-203ENST00000415288 CCNB3Q8WWL7 1395 aa12.24□□□□□ -0.45
ERBB3-203ENST00000415288 P3H3Q8IVL6 736 aa12.24□□□□□ -0.45
ERBB3-203ENST00000415288 PRKRIP1Q9H875 184 aaPredicted RBP12.24□□□□□ -0.45
ERBB3-203ENST00000415288 MSNP26038 577 aaKnown RBP12.24□□□□□ -0.45
ERBB3-203ENST00000415288 CANXP27824 592 aaKnown RBP12.24□□□□□ -0.45
ERBB3-203ENST00000415288 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
ERBB3-203ENST00000415288 RUSC2Q8N2Y8 1516 aa12.22□□□□□ -0.45
ERBB3-203ENST00000415288 PANK2Q9BZ23 570 aa12.22□□□□□ -0.45
ERBB3-203ENST00000415288 DNTTIP2Q5QJE6 756 aaKnown RBP12.21□□□□□ -0.45
ERBB3-203ENST00000415288 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.46
ERBB3-203ENST00000415288 WDR97A6NE52 1622 aa12.21□□□□□ -0.46
ERBB3-203ENST00000415288 KIAA1211Q6ZU35 1233 aa12.21□□□□□ -0.46
ERBB3-203ENST00000415288 MS4A1P11836 297 aa12.2□□□□□ -0.46
ERBB3-203ENST00000415288 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
ERBB3-203ENST00000415288 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms