RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
TRA2B-204ENST00000414862 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
TRA2B-204ENST00000414862 NACADO15069 1562 aa16.75■□□□□ 0.27
TRA2B-204ENST00000414862 TSPYL2Q9H2G4 693 aaPredicted RBP16.73■□□□□ 0.27
TRA2B-204ENST00000414862 DCAF8L2P0C7V8 631 aa16.69■□□□□ 0.26
TRA2B-204ENST00000414862 RGL2O15211 777 aa16.67■□□□□ 0.26
TRA2B-204ENST00000414862 PAK3O75914 559 aaPredicted RBP16.63■□□□□ 0.25
TRA2B-204ENST00000414862 PYGBP11216 843 aa16.6■□□□□ 0.25
TRA2B-204ENST00000414862 CHRM1P11229 460 aaPredicted RBP16.6■□□□□ 0.25
TRA2B-204ENST00000414862 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
TRA2B-204ENST00000414862 CCDC61Q9Y6R9 512 aa16.57■□□□□ 0.24
TRA2B-204ENST00000414862 RNF25Q96BH1 459 aaPredicted RBP16.54■□□□□ 0.24
TRA2B-204ENST00000414862 ZRANB1Q9UGI0 708 aa16.52■□□□□ 0.24
TRA2B-204ENST00000414862 C19orf67A6NJJ6 358 aa16.5■□□□□ 0.23
TRA2B-204ENST00000414862 RIOK3O14730 519 aaKnown RBP16.48■□□□□ 0.23
TRA2B-204ENST00000414862 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
TRA2B-204ENST00000414862 HAX1O00165 279 aa16.43■□□□□ 0.22
TRA2B-204ENST00000414862 TAOK2Q9UL54 1235 aa16.42■□□□□ 0.22
TRA2B-204ENST00000414862 MYO15BQ96JP2 1530 aa16.41■□□□□ 0.22
TRA2B-204ENST00000414862 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
TRA2B-204ENST00000414862 KIF12Q96FN5 646 aa16.4■□□□□ 0.22
TRA2B-204ENST00000414862 PHF12Q96QT6 1004 aa16.39■□□□□ 0.21
TRA2B-204ENST00000414862 VGFO15240 615 aaPredicted RBP16.38■□□□□ 0.21
TRA2B-204ENST00000414862 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
TRA2B-204ENST00000414862 ZNF467Q7Z7K2 595 aaPredicted RBP16.38■□□□□ 0.21
TRA2B-204ENST00000414862 MAP3K13O43283 966 aa16.37■□□□□ 0.21
TRA2B-204ENST00000414862 POTEHQ6S545 545 aa16.37■□□□□ 0.21
TRA2B-204ENST00000414862 ZNF579Q8NAF0 562 aaKnown RBP16.36■□□□□ 0.21
TRA2B-204ENST00000414862 PCDHB13Q9Y5F0 798 aa16.36■□□□□ 0.21
TRA2B-204ENST00000414862 PCDHB8Q9UN66 801 aa16.35■□□□□ 0.21
TRA2B-204ENST00000414862 SGIP1Q9BQI5 828 aa16.34■□□□□ 0.21
TRA2B-204ENST00000414862 IFNL1Q8IU54 200 aa16.3■□□□□ 0.2
TRA2B-204ENST00000414862 HS6ST3Q8IZP7 471 aa16.3■□□□□ 0.2
TRA2B-204ENST00000414862 EVX2Q03828 476 aa16.29■□□□□ 0.2
TRA2B-204ENST00000414862 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
TRA2B-204ENST00000414862 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
TRA2B-204ENST00000414862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.28■□□□□ 0.2
TRA2B-204ENST00000414862 ZFP91Q96JP5 570 aaPredicted RBP16.28■□□□□ 0.2
TRA2B-204ENST00000414862 STK25O00506 426 aa16.27■□□□□ 0.2
TRA2B-204ENST00000414862 PDAP1Q13442 181 aaKnown RBP16.25■□□□□ 0.19
TRA2B-204ENST00000414862 CECR2Q9BXF3 1484 aa16.23■□□□□ 0.19
TRA2B-204ENST00000414862 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
TRA2B-204ENST00000414862 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.22■□□□□ 0.19
TRA2B-204ENST00000414862 PSEN1P49768 467 aa16.21■□□□□ 0.19
TRA2B-204ENST00000414862 STK24Q9Y6E0 443 aa16.21■□□□□ 0.19
TRA2B-204ENST00000414862 MS4A3Q96HJ5 214 aa16.2■□□□□ 0.18
TRA2B-204ENST00000414862 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
TRA2B-204ENST00000414862 PLCB2Q00722 1185 aa16.16■□□□□ 0.18
TRA2B-204ENST00000414862 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
TRA2B-204ENST00000414862 CLCN6P51797 869 aa16.13■□□□□ 0.17
TRA2B-204ENST00000414862 SLC24A1O60721 1099 aa16.1■□□□□ 0.17
TRA2B-204ENST00000414862 GALR2O43603 387 aaPredicted RBP16.09■□□□□ 0.17
TRA2B-204ENST00000414862 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
TRA2B-204ENST00000414862 TRPC6Q9Y210 931 aa16.09■□□□□ 0.17
TRA2B-204ENST00000414862 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
TRA2B-204ENST00000414862 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.16
TRA2B-204ENST00000414862 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
TRA2B-204ENST00000414862 CFAP44Q96MT7 982 aa16.07■□□□□ 0.16
TRA2B-204ENST00000414862 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
TRA2B-204ENST00000414862 SPRYD3Q8NCJ5 442 aa16.06■□□□□ 0.16
TRA2B-204ENST00000414862 TMEM106CQ9BVX2 250 aa16.04■□□□□ 0.16
TRA2B-204ENST00000414862 SCRIBQ14160 1630 aa16.04■□□□□ 0.16
TRA2B-204ENST00000414862 CABP2Q9NPB3 220 aa16.02■□□□□ 0.16
TRA2B-204ENST00000414862 TIE1P35590 1138 aa16.01■□□□□ 0.15
TRA2B-204ENST00000414862 GABBR2O75899 941 aa15.99■□□□□ 0.15
TRA2B-204ENST00000414862 TTLL13PA6NNM8 815 aa15.96■□□□□ 0.15
TRA2B-204ENST00000414862 BMP2KQ9NSY1 1161 aaPredicted RBP15.96■□□□□ 0.15
TRA2B-204ENST00000414862 GTPBP6O43824 516 aaPredicted RBP15.95■□□□□ 0.14
TRA2B-204ENST00000414862 EFCAB3Q8N7B9 438 aa15.95■□□□□ 0.14
TRA2B-204ENST00000414862 HAP1P54257 671 aaPredicted RBP15.94■□□□□ 0.14
TRA2B-204ENST00000414862 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
TRA2B-204ENST00000414862 RYDENQ9NUL5 291 aaKnown RBP15.91■□□□□ 0.14
TRA2B-204ENST00000414862 SOX12O15370 315 aa15.88■□□□□ 0.13
TRA2B-204ENST00000414862 SP7Q8TDD2 431 aaPredicted RBP15.88■□□□□ 0.13
TRA2B-204ENST00000414862 MFRPQ9BY79 579 aa15.88■□□□□ 0.13
TRA2B-204ENST00000414862 MKRN3Q13064 507 aaKnown RBP15.85■□□□□ 0.13
TRA2B-204ENST00000414862 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
TRA2B-204ENST00000414862 ATMINO43313 823 aaPredicted RBP15.84■□□□□ 0.13
TRA2B-204ENST00000414862 ATN1P54259 1190 aaPredicted RBP15.83■□□□□ 0.12
TRA2B-204ENST00000414862 PHF8Q9UPP1 1060 aa15.83■□□□□ 0.12
TRA2B-204ENST00000414862 NLRP6P59044 892 aa15.82■□□□□ 0.12
TRA2B-204ENST00000414862 ASTLQ6HA08 431 aaPredicted RBP15.82■□□□□ 0.12
TRA2B-204ENST00000414862 DCBLD2Q96PD2 775 aa15.81■□□□□ 0.12
TRA2B-204ENST00000414862 FBXO22Q8NEZ5 403 aa15.79■□□□□ 0.12
TRA2B-204ENST00000414862 TSHZ2Q9NRE2 1034 aa15.79■□□□□ 0.12
TRA2B-204ENST00000414862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.112e-7■■□□□ 11.5
TRA2B-204ENST00000414862 MS4A4AQ96JQ5 239 aa15.71■□□□□ 0.11
TRA2B-204ENST00000414862 PPP1R37O75864 691 aa15.68■□□□□ 0.1
TRA2B-204ENST00000414862 IER5LQ5T953 404 aa15.68■□□□□ 0.1
TRA2B-204ENST00000414862 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
TRA2B-204ENST00000414862 VSIG10Q8N0Z9 540 aa15.68■□□□□ 0.1
TRA2B-204ENST00000414862 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
TRA2B-204ENST00000414862 CUX2O14529 1486 aa15.66■□□□□ 0.1
TRA2B-204ENST00000414862 POTEIP0CG38 1075 aa15.65■□□□□ 0.1
TRA2B-204ENST00000414862 IRX5P78411 483 aaPredicted RBP15.63■□□□□ 0.09
TRA2B-204ENST00000414862 OCEL1Q9H607 264 aa15.61■□□□□ 0.09
TRA2B-204ENST00000414862 KDM2AQ9Y2K7 1162 aa15.61■□□□□ 0.09
TRA2B-204ENST00000414862 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
TRA2B-204ENST00000414862 SLC39A7Q92504 469 aa15.59■□□□□ 0.09
TRA2B-204ENST00000414862 PDCD7Q8N8D1 485 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms