RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 DCAF1Q9Y4B6 1507 aa24.31■■□□□ 1.48
HCG11-201ENST00000411553 CDK11BP21127 795 aaKnown RBP24.3■■□□□ 1.48
HCG11-201ENST00000411553 ARXQ96QS3 562 aa24.29■■□□□ 1.48
HCG11-201ENST00000411553 PLEKHD1A6NEE1 506 aa24.28■■□□□ 1.48
HCG11-201ENST00000411553 NBR1Q14596 966 aa24.26■■□□□ 1.47
HCG11-201ENST00000411553 CLIP1P30622 1438 aa24.25■■□□□ 1.47
HCG11-201ENST00000411553 HIRIP3Q9BW71 556 aaPredicted RBP24.25■■□□□ 1.47
HCG11-201ENST00000411553 HAP1P54257 671 aaPredicted RBP24.23■■□□□ 1.47
HCG11-201ENST00000411553 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
HCG11-201ENST00000411553 IRX6P78412 446 aaPredicted RBP24.2■■□□□ 1.46
HCG11-201ENST00000411553 ARID4BQ4LE39 1312 aaPredicted RBP24.2■■□□□ 1.46
HCG11-201ENST00000411553 CFAP53Q96M91 514 aa24.2■■□□□ 1.46
HCG11-201ENST00000411553 RGL3Q3MIN7 710 aa24.19■■□□□ 1.46
HCG11-201ENST00000411553 ZCCHC6Q5VYS8 1495 aaKnown RBP24.18■■□□□ 1.46
HCG11-201ENST00000411553 NCLP19338 710 aaKnown RBP24.15■■□□□ 1.46
HCG11-201ENST00000411553 CDCA8Q53HL2 280 aa24.15■■□□□ 1.46
HCG11-201ENST00000411553 BECN1Q14457 450 aa24.13■■□□□ 1.45
HCG11-201ENST00000411553 GLIPR1L2Q4G1C9 344 aa24.13■■□□□ 1.45
HCG11-201ENST00000411553 KNSTRNQ9Y448 316 aa24.1■■□□□ 1.45
HCG11-201ENST00000411553 MIER1Q8N108 512 aa24.09■■□□□ 1.45
HCG11-201ENST00000411553 PPM1GO15355 546 aaPredicted RBP24.08■■□□□ 1.45
HCG11-201ENST00000411553 CFDP1Q9UEE9 299 aaPredicted RBP24.08■■□□□ 1.45
HCG11-201ENST00000411553 DDRGK1Q96HY6 314 aa24.08■■□□□ 1.44
HCG11-201ENST00000411553 GOLGA6L22H0YM25 854 aa24.04■■□□□ 1.44
HCG11-201ENST00000411553 CASC1Q6TDU7 716 aa24.01■■□□□ 1.43
HCG11-201ENST00000411553 GOLGA3Q08378 1498 aa24.01■■□□□ 1.43
HCG11-201ENST00000411553 CARD11Q9BXL7 1154 aa24■■□□□ 1.43
HCG11-201ENST00000411553 FTSJ3Q8IY81 847 aaKnown RBP23.99■■□□□ 1.43
HCG11-201ENST00000411553 MAPK8IP3Q9UPT6 1336 aa23.98■■□□□ 1.43
HCG11-201ENST00000411553 ANP32EQ9BTT0 268 aa23.98■■□□□ 1.43
HCG11-201ENST00000411553 EEA1Q15075 1411 aa23.98■■□□□ 1.43
HCG11-201ENST00000411553 ZRSR1Q15695 479 aaKnown RBP23.97■■□□□ 1.43
HCG11-201ENST00000411553 POGKQ9P215 609 aa23.96■■□□□ 1.43
HCG11-201ENST00000411553 LMOD2Q6P5Q4 547 aa23.95■■□□□ 1.43
HCG11-201ENST00000411553 NUDCQ9Y266 331 aa23.95■■□□□ 1.43
HCG11-201ENST00000411553 LAS1LQ9Y4W2 734 aaKnown RBP23.94■■□□□ 1.42
HCG11-201ENST00000411553 TRIM44Q96DX7 344 aaPredicted RBP23.94■■□□□ 1.42
HCG11-201ENST00000411553 NEUROD2Q15784 382 aa23.92■■□□□ 1.42
HCG11-201ENST00000411553 CEP162Q5TB80 1403 aa23.91■■□□□ 1.42
HCG11-201ENST00000411553 RB1CC1Q8TDY2 1594 aa23.91■■□□□ 1.42
HCG11-201ENST00000411553 SENP3-EIF4A1A0A087X0R7 540 aa23.89■■□□□ 1.42
HCG11-201ENST00000411553 NPHP1O15259 732 aa23.87■■□□□ 1.41
HCG11-201ENST00000411553 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
HCG11-201ENST00000411553 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
HCG11-201ENST00000411553 PTMAP06454 111 aaKnown RBP23.82■■□□□ 1.4
HCG11-201ENST00000411553 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
HCG11-201ENST00000411553 CHMP4BQ9H444 224 aaKnown RBP23.81■■□□□ 1.4
HCG11-201ENST00000411553 TNNT2P45379 298 aaPredicted RBP23.79■■□□□ 1.4
HCG11-201ENST00000411553 TPRNQ4KMQ1 711 aa23.79■■□□□ 1.4
HCG11-201ENST00000411553 TULP1O00294 542 aaPredicted RBP23.79■■□□□ 1.4
HCG11-201ENST00000411553 ERCC6Q03468 1493 aa23.78■■□□□ 1.4
HCG11-201ENST00000411553 OS9Q13438 667 aaPredicted RBP23.77■■□□□ 1.4
HCG11-201ENST00000411553 FRAT1Q92837 279 aaPredicted RBP23.77■■□□□ 1.4
HCG11-201ENST00000411553 PNNQ9H307 717 aaKnown RBP23.76■■□□□ 1.39
HCG11-201ENST00000411553 SUPT16HQ9Y5B9 1047 aaKnown RBP23.76■■□□□ 1.39
HCG11-201ENST00000411553 CCDC180Q9P1Z9 1646 aa23.76■■□□□ 1.39
HCG11-201ENST00000411553 U2SURPO15042 1029 aaKnown RBP23.76■■□□□ 1.39
HCG11-201ENST00000411553 MS4A1P11836 297 aa23.74■■□□□ 1.39
HCG11-201ENST00000411553 CC2D1BQ5T0F9 858 aaKnown RBP23.73■■□□□ 1.39
HCG11-201ENST00000411553 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
HCG11-201ENST00000411553 CCNB3Q8WWL7 1395 aa23.71■■□□□ 1.39
HCG11-201ENST00000411553 HDGFP51858 240 aaKnown RBP23.7■■□□□ 1.39
HCG11-201ENST00000411553 FGD1P98174 961 aa23.7■■□□□ 1.39
HCG11-201ENST00000411553 KANK1Q14678 1352 aa23.7■■□□□ 1.38
HCG11-201ENST00000411553 RGS3P49796 1198 aa23.7■■□□□ 1.38
HCG11-201ENST00000411553 TAOK2Q9UL54 1235 aa23.69■■□□□ 1.38
HCG11-201ENST00000411553 TNIKQ9UKE5 1360 aa23.68■■□□□ 1.38
HCG11-201ENST00000411553 GOLGA2Q08379 1002 aa23.68■■□□□ 1.38
HCG11-201ENST00000411553 DNTTIP2Q5QJE6 756 aaKnown RBP23.68■■□□□ 1.38
HCG11-201ENST00000411553 TMF1P82094 1093 aa23.68■■□□□ 1.38
HCG11-201ENST00000411553 SIN3AQ96ST3 1273 aa23.67■■□□□ 1.38
HCG11-201ENST00000411553 KCNJ4P48050 445 aa23.66■■□□□ 1.38
HCG11-201ENST00000411553 TRHP20396 242 aaPredicted RBP23.63■■□□□ 1.37
HCG11-201ENST00000411553 DCAF11Q8TEB1 546 aa23.63■■□□□ 1.37
HCG11-201ENST00000411553 MLECQ14165 292 aa23.62■■□□□ 1.37
HCG11-201ENST00000411553 PPP4R2Q9NY27 417 aa23.62■■□□□ 1.37
HCG11-201ENST00000411553 NAP1L2Q9ULW6 460 aaPredicted RBP23.61■■□□□ 1.37
HCG11-201ENST00000411553 HSP90AB1P08238 724 aaKnown RBP23.61■■□□□ 1.37
HCG11-201ENST00000411553 SRPK2P78362 688 aaKnown RBP23.61■■□□□ 1.37
HCG11-201ENST00000411553 PLCB2Q00722 1185 aa23.59■■□□□ 1.37
HCG11-201ENST00000411553 SOX12O15370 315 aa23.59■■□□□ 1.37
HCG11-201ENST00000411553 GOLGA6L6A8MZA4 724 aa23.58■■□□□ 1.37
HCG11-201ENST00000411553 FHAD1B1AJZ9 1412 aa23.56■■□□□ 1.36
HCG11-201ENST00000411553 MORC1Q86VD1 984 aa23.54■■□□□ 1.36
HCG11-201ENST00000411553 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
HCG11-201ENST00000411553 SAFB2Q14151 953 aaKnown RBP eCLIP23.51■■□□□ 1.35
HCG11-201ENST00000411553 NACADO15069 1562 aa23.5■■□□□ 1.35
HCG11-201ENST00000411553 RTF1Q92541 710 aaKnown RBP23.5■■□□□ 1.35
HCG11-201ENST00000411553 GOLGA6L4A6NEF3 574 aa23.5■■□□□ 1.35
HCG11-201ENST00000411553 ERICH6BQ5W0A0 696 aa23.49■■□□□ 1.35
HCG11-201ENST00000411553 NRDCO43847 1150 aa23.49■■□□□ 1.35
HCG11-201ENST00000411553 MCCP23508 829 aa23.47■■□□□ 1.35
HCG11-201ENST00000411553 GGT6Q6P531 493 aa23.46■■□□□ 1.35
HCG11-201ENST00000411553 HSCBQ8IWL3 235 aa23.46■■□□□ 1.35
HCG11-201ENST00000411553 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.34
HCG11-201ENST00000411553 MYO15BQ96JP2 1530 aa23.45■■□□□ 1.34
HCG11-201ENST00000411553 HDGFL2Q7Z4V5 671 aaPredicted RBP23.44■■□□□ 1.34
HCG11-201ENST00000411553 STK26Q9P289 416 aa23.42■■□□□ 1.34
HCG11-201ENST00000411553 NOP58Q9Y2X3 529 aaKnown RBP23.41■■□□□ 1.34
HCG11-201ENST00000411553 CFAP44Q96MT7 982 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms