RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 C19orf67A6NJJ6 358 aa13.09□□□□□ -0.31
LSM5-203ENST00000409782 GSE1Q14687 1217 aa13.09□□□□□ -0.31
LSM5-203ENST00000409782 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
LSM5-203ENST00000409782 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
LSM5-203ENST00000409782 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
LSM5-203ENST00000409782 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
LSM5-203ENST00000409782 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
LSM5-203ENST00000409782 EVX2Q03828 476 aa12.94□□□□□ -0.34
LSM5-203ENST00000409782 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
LSM5-203ENST00000409782 PKD2Q13563 968 aa12.91□□□□□ -0.34
LSM5-203ENST00000409782 PYGBP11216 843 aa12.9□□□□□ -0.34
LSM5-203ENST00000409782 CCDC180Q9P1Z9 1646 aa12.9□□□□□ -0.34
LSM5-203ENST00000409782 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
LSM5-203ENST00000409782 CHRM1P11229 460 aaPredicted RBP12.88□□□□□ -0.35
LSM5-203ENST00000409782 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
LSM5-203ENST00000409782 CLCN6P51797 869 aa12.86□□□□□ -0.35
LSM5-203ENST00000409782 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
LSM5-203ENST00000409782 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
LSM5-203ENST00000409782 VSIG10Q8N0Z9 540 aa12.83□□□□□ -0.36
LSM5-203ENST00000409782 BCANQ96GW7 911 aa12.83□□□□□ -0.36
LSM5-203ENST00000409782 MAP3K13O43283 966 aa12.8□□□□□ -0.36
LSM5-203ENST00000409782 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
LSM5-203ENST00000409782 SGIP1Q9BQI5 828 aa12.8□□□□□ -0.36
LSM5-203ENST00000409782 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
LSM5-203ENST00000409782 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
LSM5-203ENST00000409782 DCAF8L2P0C7V8 631 aa12.76□□□□□ -0.37
LSM5-203ENST00000409782 GABBR2O75899 941 aa12.74□□□□□ -0.37
LSM5-203ENST00000409782 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
LSM5-203ENST00000409782 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
LSM5-203ENST00000409782 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
LSM5-203ENST00000409782 RGL2O15211 777 aa12.71□□□□□ -0.37
LSM5-203ENST00000409782 TAOK2Q9UL54 1235 aa12.71□□□□□ -0.37
LSM5-203ENST00000409782 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
LSM5-203ENST00000409782 GALR2O43603 387 aaPredicted RBP12.7□□□□□ -0.38
LSM5-203ENST00000409782 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
LSM5-203ENST00000409782 RNF25Q96BH1 459 aaPredicted RBP12.68□□□□□ -0.38
LSM5-203ENST00000409782 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
LSM5-203ENST00000409782 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
LSM5-203ENST00000409782 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
LSM5-203ENST00000409782 ABCC9O60706 1549 aa12.62□□□□□ -0.39
LSM5-203ENST00000409782 PSEN1P49768 467 aa12.6□□□□□ -0.39
LSM5-203ENST00000409782 DCBLD2Q96PD2 775 aa12.6□□□□□ -0.39
LSM5-203ENST00000409782 TIE1P35590 1138 aa12.59□□□□□ -0.39
LSM5-203ENST00000409782 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
LSM5-203ENST00000409782 TRPC6Q9Y210 931 aa12.57□□□□□ -0.4
LSM5-203ENST00000409782 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.55□□□□□ -0.4
LSM5-203ENST00000409782 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
LSM5-203ENST00000409782 STK25O00506 426 aa12.53□□□□□ -0.4
LSM5-203ENST00000409782 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
LSM5-203ENST00000409782 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
LSM5-203ENST00000409782 CHGAP10645 457 aaKnown RBP12.51□□□□□ -0.41
LSM5-203ENST00000409782 KDM2AQ9Y2K7 1162 aa12.51□□□□□ -0.41
LSM5-203ENST00000409782 ASTLQ6HA08 431 aaPredicted RBP12.5□□□□□ -0.41
LSM5-203ENST00000409782 ATMINO43313 823 aaPredicted RBP12.49□□□□□ -0.41
LSM5-203ENST00000409782 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
LSM5-203ENST00000409782 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
LSM5-203ENST00000409782 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
LSM5-203ENST00000409782 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
LSM5-203ENST00000409782 PRKCSHP14314 528 aaPredicted RBP12.47□□□□□ -0.41
LSM5-203ENST00000409782 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
LSM5-203ENST00000409782 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.41
LSM5-203ENST00000409782 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
LSM5-203ENST00000409782 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
LSM5-203ENST00000409782 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
LSM5-203ENST00000409782 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
LSM5-203ENST00000409782 MKRN3Q13064 507 aaKnown RBP12.41□□□□□ -0.42
LSM5-203ENST00000409782 CFAP44Q96MT7 982 aa12.4□□□□□ -0.42
LSM5-203ENST00000409782 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
LSM5-203ENST00000409782 SLC39A7Q92504 469 aa12.37□□□□□ -0.43
LSM5-203ENST00000409782 IER5LQ5T953 404 aa12.36□□□□□ -0.43
LSM5-203ENST00000409782 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
LSM5-203ENST00000409782 C7P10643 843 aa12.35□□□□□ -0.43
LSM5-203ENST00000409782 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
LSM5-203ENST00000409782 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
LSM5-203ENST00000409782 SOX12O15370 315 aa12.33□□□□□ -0.44
LSM5-203ENST00000409782 SEC24BO95487 1268 aa12.31□□□□□ -0.44
LSM5-203ENST00000409782 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.444e-7■□□□□ 10.5
LSM5-203ENST00000409782 METRNQ9UJH8 293 aa12.3□□□□□ -0.44
LSM5-203ENST00000409782 TSHZ2Q9NRE2 1034 aa12.29□□□□□ -0.44
LSM5-203ENST00000409782 PLCG2P16885 1265 aa12.27□□□□□ -0.45
LSM5-203ENST00000409782 NLRP6P59044 892 aa12.27□□□□□ -0.45
LSM5-203ENST00000409782 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
LSM5-203ENST00000409782 RYDENQ9NUL5 291 aaKnown RBP12.27□□□□□ -0.45
LSM5-203ENST00000409782 IRX5P78411 483 aaPredicted RBP12.25□□□□□ -0.45
LSM5-203ENST00000409782 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
LSM5-203ENST00000409782 MFRPQ9BY79 579 aa12.24□□□□□ -0.45
LSM5-203ENST00000409782 PHF8Q9UPP1 1060 aa12.24□□□□□ -0.45
LSM5-203ENST00000409782 COLQQ9Y215 455 aaPredicted RBP12.21□□□□□ -0.45
LSM5-203ENST00000409782 ILDR1Q86SU0 546 aaPredicted RBP12.2□□□□□ -0.46
LSM5-203ENST00000409782 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
LSM5-203ENST00000409782 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
LSM5-203ENST00000409782 RB1CC1Q8TDY2 1594 aa12.16□□□□□ -0.46
LSM5-203ENST00000409782 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
LSM5-203ENST00000409782 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
LSM5-203ENST00000409782 NBR1Q14596 966 aa12.15□□□□□ -0.46
LSM5-203ENST00000409782 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
LSM5-203ENST00000409782 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
LSM5-203ENST00000409782 NACADO15069 1562 aa12.13□□□□□ -0.47
LSM5-203ENST00000409782 G3V3G9 751 aa12.13□□□□□ -0.47
LSM5-203ENST00000409782 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms